Carassius auratus (goldfish): 113061409
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Entry
113061409 CDS
T07313
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113061409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113061409
03036 Chromosome and associated proteins [BR:
caua03036
]
113061409
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113061409
Coactivators
SAGA/TFTC/STAGA complex
113061409
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
113061409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
113061409
NCBI-ProteinID:
XP_026086269
Ensembl:
ENSCARG00000035226
UniProt:
A0A6P6LP59
LinkDB
All DBs
Position
43:complement(1930060..1999996)
Genome browser
AA seq
1049 aa
AA seq
DB search
MLIFEMSASFIFKFCFSCYIFVNVTCFRTFREHSKVTFPQLLPNSKMERSLYIHKTNKTF
LKHCNIYLSIYLSIYLSIYLSIYLSIYLSIYLSIYLSIYLNSCSILSCNGRQLFGFGPLT
SHPFPQCHSNTTAHSRSWTRTSRQPITHRANMAGASDPLEDMLFSEVDEKAVSDLVGSLE
SQLGGQGEPPAAQPENARPGSAKQQQAGGTAQLPAPVDSPSEPQQQAQQQQNARKAARNP
DSDPKDASTDKHSKALEKESPLKSHGSIIIITTAAAAAAAAASDAPAPGNKGESPRDTRK
KHPGNTRALRSAASHSLNGNGGDAASASPSTSSPGSATFTVSSNPQAITLDRGTPTIALH
RLPRHIIASIAQNGNGTSVSALVQQGARIGAAGAQVNHSKPPTDANNAKPAATSAPPTAA
TAAPVKPAVSVSAAPVIRPAQTQTQTPAQQRVVTPQLIVRPPQQQTTIQLPPGFTIPPGM
VLVRTEMGQLVMVPQQALAQAQAQNSISPRPSTPTSGATFRVTTPQSPVSTQAIRPAPAA
QTKPVQSSSASAAAQTCTAKGPVAAAVAVTAPQQVQPASGPQGPLTQMPLAPQSAAAPAP
GAPLVSQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLLDAKIDPEEFTSR
LQSELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLAQPPQPNKTSVTPVQTSVSVRPHLP
NSTTVLPQGIKRAVGPGGQIRMPVVITQTVRATGTLGKPAVIQTGKSPAGVTTQLSGNQK
NKLNDPGGGSFRDDDDINDVASMAGVNLNEESARILATNSDLVGTQIRSCKDEAFLSTGL
LHRRILETAKRFGVTDVPLEAVNFISHATQSRLRTVLEKVSSIAQHRMDSSKEDEGYEQA
SDVRSQLKFFEQLERMEKQRKDEREREILLRAAKSRSRQEDPEQARLKQKAKEMQQQELA
QMRQRDANLTALAAIGPRKKRKVDSPGATATEVSGSSAGSPGGSSAPCCSSRQFNRQRIT
RVNLRDFIFYMEQERETSRSLLLYRALLK
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgctaatctttgaaatgtctgcatcgtttatctttaaattctgtttctcttgctacatt
tttgttaatgttacttgtttcagaacgttcagagaacattcaaaagtaacattcccacaa
cttttgccaaattctaaaatggaacgttccctttacattcacaaaactaataaaacgttt
ctaaaacattgcaatatctatctatctatctatctatctatctatctatctatctatcta
tctatctatctatctatctatctatctatctatctatctatctatctatctatctatctc
aactcgtgtagtatcttgagttgtaacgggcgacaactgtttggttttggccctctgacg
tcacatccattcccacaatgccatagtaacacgactgcgcactcgcgctcgtggacgcgc
accagcagacagcccatcacacacagagcgaacatggcgggcgcctccgaccctctggaa
gacatgctcttctccgaggtggacgagaaagccgtgagtgatctggtgggctcgctggag
tctcagctggggggccagggcgagccgcccgccgcgcagcccgagaacgcgcgcccgggc
agcgcgaagcagcagcaggcaggaggaacagcgcagctgcctgctcctgtagactctcca
tcagaaccacaacaacaagcacagcagcagcagaacgcacggaaagctgcgcgcaacccg
gattccgacccgaaagacgccagcacggataagcattccaaagccttggagaaggagagc
cctctgaagtcgcacggcagcatcatcatcatcactacagcagcagcagcagcagcagca
gcagcatccgatgctcctgcaccgggcaacaaaggtgagagcccgagggacacccgcaag
aagcacccggggaatacgcgcgcgctgcgctccgcagcatcccacagtctcaacggcaac
ggaggcgacgcagcatcagcatcacccagcacctccagcccgggcagcgcgacttttacc
gtgtccagtaacccgcaggcgatcacgctggaccgcgggacgcccaccatcgcgctgcac
cgactcccgcgtcacatcatcgccagcatcgcgcagaatggaaacggcacgtccgtgtcc
gcgctggtccagcagggcgcgcggatcggagcggcgggcgcgcaggtcaaccacagcaaa
ccacccacggacgcgaacaacgcgaaacccgcggcgacctctgcgcctcccaccgcggcc
acagcagcgcccgtcaaacccgctgtcagtgtcagtgcggctccggtcatcagacctgcg
cagacgcagacgcagacgccagcgcagcagagggtcgtaacgccgcagctgattgtcaga
ccaccgcagcaacaaactacaatacagctgccccccggattcaccatccctccagggatg
gtgctggtccggacggagatgggtcagctggtgatggttcctcagcaggctctggctcaa
gctcaggcccagaacagcatctcaccgcggccctccacacccaccagcggggccacattc
agggtcacgaccccacagtctcctgttagcactcaggcgattcgtcccgctcctgcggct
caaaccaaaccggtccagtcgagttcagcgagcgccgcggcccaaacctgcaccgctaag
ggccccgtggcagccgctgtggcagtgacagctccccagcaggtccagccggcctcgggt
ccccaggggcccctcactcagatgccactggccccacagagcgcagccgccccggcccct
ggagctccgctcgtctcccaggagatgcaggagaacgtgaagaagtgcaagaacttcttg
gccacgttgatcaagttggcatcccataattccccttccccagagacgtctcgaaacgtg
aaagcgctggtgcaggatttactggatgcaaagatcgatccggaggagttcaccagccgg
ctgcagtccgagctgaagtcgtctccgcagccgtacctcgtccctttcctgaagaaaagt
ctccctgcgttgcgtctgtctcttctgaacagccagcagtctctcgctcagcctccgcag
cccaataaaaccagtgtgactccggttcagacgagtgtgagcgtgcgtccacacctgccc
aacagcaccaccgtactgccacaaggtatcaagagggcagtgggtcctggaggtcagatc
cggatgcctgtggtcatcacacagacggtgcgagcaacaggtactttagggaagcctgcg
gttatccagacgggcaaaagccctgcgggcgtcaccacacagctctcaggaaaccagaag
aacaagctgaatgacccggggggaggctccttcagagacgatgatgacatcaatgatgtg
gcgtctatggccggcgtgaacctcaacgaggagagcgcacgtattctagcgaccaactct
gatctggtgggaacgcagatccgctcctgtaaagacgaggcctttctgtctacaggtctg
ctacaccggcgtatactggaaacagcgaagaggttcggagtgacggacgtaccgctggag
gctgtgaacttcatctctcacgccactcagtccagattacgcacggtgctggagaaagtc
tcctccatcgcccagcacagaatggactcgtctaaggaagatgaggggtacgagcaggcg
tctgatgtgcgctcgcagctcaagtttttcgagcagttggaacggatggagaagcagagg
aaagatgagcgagaacgagagattctcctcagagcggcgaagagtcgctcgcggcaagaa
gatccagaacaagcccgtctgaagcagaaagcaaaggagatgcagcagcaggaactcgct
cagatgagacaacgagacgcaaacctgacggcgctcgccgccatcggccctcggaagaaa
cgcaaggtggactcgccaggagctacagcgactgaggtgtcgggaagttcggcaggttcc
ccgggcggatcgtcggccccgtgctgctcgtcacggcagtttaaccgccagagaataaca
cgcgtcaacctcagggacttcatcttctacatggagcaggagcgagagaccagcagatct
ctcttactttaccgcgctctcctgaagtag
DBGET
integrated database retrieval system
