Carassius auratus (goldfish): 113061416
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Entry
113061416 CDS
T07313
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04120
Ubiquitin mediated proteolysis
caua04144
Endocytosis
caua04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113061416
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113061416
09144 Cellular community - eukaryotes
04530 Tight junction
113061416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113061416
04121 Ubiquitin system [BR:
caua04121
]
113061416
03029 Mitochondrial biogenesis [BR:
caua03029
]
113061416
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
113061416
Membrane trafficking [BR:
caua04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
113061416
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
HECT type E3
113061416
Mitochondrial biogenesis [BR:
caua03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
113061416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
113061416
NCBI-ProteinID:
XP_026086287
Ensembl:
ENSCARG00000035374
UniProt:
A0A6P6LR88
LinkDB
All DBs
Position
43:2098890..2132882
Genome browser
AA seq
1233 aa
AA seq
DB search
MARQLRLHFASRRSNTDPLSDTCSGHAEESGLTNAGRSSSEGLVQSSLRMKVTPGQLALA
LPPLSPEYSNLQRNSTVFIPKVNGSRKSMLQISLQPCGGDGELASCESGNGDGGSCSSST
TSDAGYCSSNSIFEADVPDRKPISRRKARVPLRRCSSLVIFPQSPCTTPPASPVSPVASP
MIPPLPPSARSSFQTSHQMQLSSIDALHDDTAKGSVATAVNGLRLSKTSTSSENRDAKPI
VHFSVPPEQPPGPERTERHSSVLLHFANQRPLPSGKGSSAKTKFNIDTSQPLKGPQTNNV
TEPQKAKLFRSTSSCMLPSGRASSTERRHDTFPTCGNLDKSSRKGSHRTLQRSISLEVPY
ANAEISCHVSNAADVDTKNGTPHVHIRVSHGTGARTSNTLQNNGINNETHHAATCTERNA
TTRDDFLGQVDVPLHQIPTEHPNNERPYTFKDFLLHPRSHKSRVKGHLRLKMTYLPKNND
MEDEPAEQNGSLDQPGWEFLEPQEFCSPHNPHQLPALPPGWEERQDNLGRTYYVNHESRS
TQWHRPTIQDSQRDNEQRQDTQSESQRAFLTRRQISEPGENHERRESPESWEIVTADETT
LYNSPSERSPPPPQSPMEFTGICEDFSRLQTGNNRRTSLTPQGHGSRRGSGQTLTVEEHP
VHPVLLPTSTGLPPGWEEKQDSKGRMYYVNHNSRMTTWTRPLVQLIQPSSEAASASAMGG
GVMSLSQNPAGYAPPLLSPDVSPQHTRAHTPEHAGPMPAGWEVRSAPNGRPFFINHNTKT
TTWDDPRLKVPVQVMRRVSLDPTDLGPLPPGWEERVHSDGRIFYINHNTKATQWEDPRLQ
SSAITGPAVPYSRDYKQKYDYFRKKLKKPADIPNRFELVVRRNALLEDSYRRILSVKRSD
LLKARLWVEFEGEKGLDYGGVAREWFYLISKEMFNPYYGLFEYSATDNYTLQINPNSGVC
NEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKPITLQDMESVDSEYFNSLRW
ILENDPTDLDLRFTIDEELFGQTHQHELKPGGADVVINDTNKNEYIHLVIQWRFVDRIQR
QMTAFKEGFYELIPQDLIKIFDENELELLMCGLGDVDVNDWRENTKYKNGYNPNHPAIIW
FWKTVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTKDKLPRAHTC
FNRLDLPPYETFEDLREKLHMAIENAQGFDGVD
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggcacgacaactgcgactgcattttgcttcacggagaagcaacactgatccgctgtcg
gatacttgcagcggtcatgcagaggaaagtgggctcacaaatgccggccgtagctccagc
gagggcctggtgcagagttccctccgcatgaaggtgactccaggacagctggctctggct
ttgccacccttgtcaccagagtacagtaatttacagcggaactccaccgtattcatccct
aaggtgaatgggagcaggaaaagcatgctgcagatctccttgcagccttgtggaggagac
ggagagctcgccagctgcgagagcggaaacggagatggaggttcctgcagcagcagcacc
acgagcgatgctggttactgcagcagcaacagcatattcgaagcggacgtcccggatcgc
aagccgatctctcggcggaaggcgagggtacctttgcggcgctgctcgtccttagtgatt
ttcccgcagagcccatgcaccacgccgcccgcgtcccccgtcagtccggtagcatctcca
atgattcctcctctgcctccatctgcacgaagttcctttcagacctctcatcagatgcag
ctgtccagcattgatgcattgcacgatgacacggccaagggatccgttgccactgcagtt
aatggtctgcggctgtccaaaaccagtacgtcgtcagaaaacagggatgccaaacccata
gtgcatttcagtgtaccaccagaacaaccgcctggaccagagcgaacggaaagacactcc
agcgttttattgcactttgcaaaccagcgacctcttccctcagggaaaggaagttcggcc
aaaacaaagtttaacattgacacttcccaacccctcaagggcccacaaaccaacaacgtc
acagagccccagaaagcgaagcttttccggagcacctcatcctgcatgctcccaagtgga
agggcttcgtcgacggaaagaagacatgacacttttccgacttgcggtaatttggataaa
tcctcaagaaaagggtcgcatcgcactcttcagaggagtatttctttggaggtaccctat
gcgaacgctgagatttcttgtcacgtttcaaatgctgcagatgtggacaccaaaaacggc
actccgcacgtacacatccgtgtttctcacggcacaggtgcaagaacatcaaacactctg
cagaacaatggcattaacaacgaaacgcatcatgctgcaacctgcacggagagaaatgct
acaacgagggatgactttctcggacaagtggatgttcctctgcaccagatccctacagaa
catcctaacaatgaaaggccgtacacattcaaggacttcctgttgcacccgagaagtcac
aagtcgagggtgaaaggtcatctgcgactgaagatgacttatctgcccaaaaacaacgac
atggaggatgagccagccgaacagaacgggagtctggatcagcctggttgggagtttctg
gagcctcaagagttctgcagtcctcacaatcctcaccagctgcctgcgctgccccctggc
tgggaggagaggcaggacaacctgggaagaacctactacgtcaaccacgagagcaggagc
acccagtggcacagacccaccatccaggacagtcaaagagacaatgaacagagacaggat
acacagagcgagtcccagcgggcgttcctcacgcgcagacagatatcagaacccggcgag
aaccacgagcgcagagagtcacctgagagctgggagatcgtaacagcagatgagaccacg
ctttataacagccccagcgagcgctcgccgccgcccccacaatccccgatggagttcacg
ggaatctgtgaggacttcagcagactgcagaccggaaacaacagacgcacgtccctcacg
ccgcagggtcacggcagccgcagaggaagtggacagactctgacggtggaagagcatcct
gttcaccccgtgttgttacccacgtctaccgggctgcctccgggatgggaggagaagcag
gacagtaaagggagaatgtattacgtcaatcacaacagcaggatgacaacctggacacgg
ccgctcgttcagctcatacagccgtcctctgaggcagcatcagcatcagcgatgggaggc
ggagtcatgtctctctcccagaatcccgcgggctacgctccgcccctgctctccccagat
gtgtcgccgcagcacacacgcgctcacacaccggagcacgccggaccgatgccggctgga
tgggaggtgcgcagcgctccaaacggacgcccctttttcatcaaccacaacactaagacc
accacatgggacgacccccggctgaaggttcccgtgcaggtgatgaggagagtctccctt
gaccccactgacctcggcccactgccgcctggttgggaggagcgagtacatagtgacggc
aggatcttctacatcaatcacaatacaaaagccacacagtgggaagatccaagactacag
agttcagccatcactggtccagctgtgccttactccagagactataaacagaagtatgat
tacttccgcaagaaactcaagaaaccagccgacatcccgaaccgctttgagttggttgtg
agacgtaacgctcttctggaggactcgtaccggcgcattctgtccgtcaagcgctcggat
ctgctgaaggcccgcctctgggtggagtttgagggggagaaggggctggactacgggggc
gtggccagggaatggttctacctgatctccaaggaaatgttcaacccgtattatgggctg
tttgagtattctgccacggataactacaccctacagatcaaccccaactcaggtgtgtgc
aatgaggaccatctgtcctactttaagttcatcggccgggtggctgggatggctgtttat
cacgggaagctgttggatgcattcttcatccggcccttttacaagatgatgctgcagaag
ccaatcacgttacaggatatggagtcagtggacagtgagtacttcaactctctccgatgg
atcttggagaacgaccccacagatctggacctcaggttcaccatcgacgaggagctcttt
ggacagacgcaccagcatgagctgaaaccaggaggtgctgatgttgtgatcaacgacacc
aacaaaaatgagtatattcatctggtgattcagtggaggtttgtggatcggatccagaga
cagatgacggccttcaaggagggtttctacgagctgattcctcaggacctgatcaagatc
tttgatgaaaacgagctggagctgctgatgtgtggtttaggagacgtggacgtcaacgac
tggagagaaaacaccaaatataaaaatggctacaacccaaatcacccagccatcatctgg
ttctggaagacggtgttgctgatggatgcagaaaagcgaatccgtttgcttcagtttgtg
acgggaacatcccgtgtaccgatgaacggcttcgctgagctctacggatccaacggaccg
cagttgttcactattgaacagtggggcacgaaggacaaactgccccgagcacacacctgt
ttcaaccgcttggatctccctccctacgagacgttcgaggatctccgcgagaagctgcac
atggccatcgaaaacgctcagggctttgatggtgtggactag
DBGET
integrated database retrieval system
