Carassius auratus (goldfish): 113061440
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Entry
113061440 CDS
T07313
Name
(RefSeq) transcription factor RFX4-like isoform X1
KO
K09174
regulatory factor X 4
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113061440
Transcription factors [BR:
caua03000
]
Eukaryotic type
Other basic domains
RF-X
113061440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
113061440
NCBI-ProteinID:
XP_026086339
Ensembl:
ENSCARG00000056887
UniProt:
A0A6P6LPC4
LinkDB
All DBs
Position
43:2973384..2993591
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AA seq
735 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNESESKRFSSHSSTGNMSNDENEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKLDSQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPD
FPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSSTVVNIVGVCDSILYKAISGVLMPSVLQALPDSLTQVIRKFAKQLDEWLKVALHD
LPENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITK
QTLYTMEDSREDQRRLIIQFYQEFDRLLEDQSPIEAYIEWLDSMVERCVVRVAGKRPGCL
KRVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYILYLLESLHCQERANEL
MRAMKAEGTPADSGEELMLMGSTPTSTSPGPYSPAKSVNSVGVPAVVSPNSAQSPEYTSI
SATTGAVQSYTWSLTYTVTTSGGSPPETGSQLSCMRDGPPLHSSSSVHRMPVYPHRDEHG
YTGSYNYSSYANQHHHAIQSQYSSLTHEPGLPTPLHYSSYHRTSAQYPLNSQMSRMESCL
MSGSPLLHSSAVTPRWPDMSAANSCYTSPTVHTSRYSTGDMYSPLAPRRNSEYEHAQHFP
GFAYINGEATTGWAK
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgggctgctggaagagcctgacatggattccacagagagctggattgaaaga
tgtctgaacgaaagcgaaagcaaacggttctccagccactcttctactggaaatatgtcc
aacgacgaaaacgaggagaaggaaaacaaccgagcatccaagccacattcaacacctgcc
acattacaatggttggaggagaactatgagatcgcagagggtgtttgtattcctcgcagt
gcactgtacatgcattatttggacttctgtgagaaacttgattctcagccggtcaacgct
gcaagcttcgggaagataataagacaacagtttcctcaattaactacacggaggctagga
accagaggccagtcaaagtatcactactatggaatcgctgtgaaagagagctctcagtac
tatgatgtgatgtactctaaaaagggcgctgcgtgggtgaacgagacggggaagaaagag
gtcaccaaacagacagtggcgtattcaccgcgctccaagctgggcactctcctgccagac
tttccaaatgtcaaagacttaaatctgcccgccagtctgccagaggagaaggtctcaacc
tttatcatgatgtacagaactcattgccagaggatactggatacggtcatacgagccaac
tttgatgaggtccagagcttcctgttgcacttttggcaaggcatgccgccacacatgctc
cctgtcttgggctcttctacagtggttaatatagttggtgtgtgtgactccatattgtac
aaggccatctcaggagtcctcatgccctccgtcctacaggctctgcctgacagcctcact
caagtgatcagaaagtttgccaagcagctggacgagtggctgaaagtggcattacatgac
ctgcctgagaacttgcgcaacataaagtttgaattgtcaagaagattttcccagatactt
aaacgacagacatcattaaaccatctctgtcaggcttctcgaactgtgatccacagtgca
gacatcacctttcagatgcttgaggattggaggaacgtagaccttaacagcatcactaaa
cagactctttatacaatggaagactccagagaggaccagaggagacttatcatccagttc
tatcaagaatttgacagactgctggaggaccagtcacccattgaagcctacatcgaatgg
ctggactctatggtggagagatgtgtcgtgagggtggcagggaagagacccggatgtctg
aagagagtagctcagcagttcctcctcatgtggtcgtgtttcgggaccagagttatccgg
gatatgacgctgcatagcgcacccagcttcggctcattccatctgatccacctcatgttt
gatgactacatactatacctgcttgagtctctgcactgccaggagagagccaatgaactc
atgagggctatgaaagcagaggggacaccagcagattctggggaagagctgatgcttatg
ggttccacccccacatctacgtcacctggaccctactctcctgccaagtctgttaactca
gtgggtgtaccggcagtagtatcccccaattcagcccagtctccagagtacaccagcata
tcagctaccacaggagctgttcagtcatatacctggtcccttacatacacagtgacaaca
tcaggtggcagcccacccgaaactggatcccagctttcctgcatgagagacggaccccct
ctacatagctcctcatctgtccacaggatgccagtttacccacatcgggatgagcatggc
tatactggcagctataattacagcagctacgcaaaccagcaccatcatgcaatccagagt
cagtactccagtttgacccacgaaccagggctgcccacccctctgcactattcatcatac
caccggacctcagcacagtatccactcaacagccagatgtccagaatggagtcctgtttg
atgagtgggtctccgcttttacactcgagcgcggttaccccccgatggccggatatgtcc
gcggccaatagctgttacaccagccccactgtccacacgtcacgctactccaccggagac
atgtactcccctctcgccccacgcaggaactctgaatatgagcatgcacaacattttcca
ggatttgcctatattaatggggaggcaacgactgggtgggcaaaatga
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