Carassius auratus (goldfish): 113061469
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Entry
113061469 CDS
T07313
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113061469 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113061469 (sf3b3)
03041 Spliceosome [BR:
caua03041
]
113061469 (sf3b3)
03036 Chromosome and associated proteins [BR:
caua03036
]
113061469 (sf3b3)
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
113061469 (sf3b3)
Spliceosome [BR:
caua03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
113061469 (sf3b3)
Complex B
113061469 (sf3b3)
Complex C
U2 SnRNP specific factors
113061469 (sf3b3)
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
113061469 (sf3b3)
TFTC complex
113061469 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
113061469
NCBI-ProteinID:
XP_026086386
Ensembl:
ENSCARG00000065369
UniProt:
A0A6P6LSC2
LinkDB
All DBs
Position
43:3608928..3626106
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISHAIHGNFSGTKLQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG
VIRSLMAFRLTGGTKDYVVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAFMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDAGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPTGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQAQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAIFNQVAFP
LQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPETIFGAPKAGSGQWASLVRMINPIQGNTLDLVQLEQNEAAFSVAVCRFSSGG
DDWYVLVGVARDMILNPRSVGGGYIYTYRLVGGGDKLEFLHKTPVEDVPLAIAPFQGRVL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVSDVQESLFWVRYRRNENQ
LIIFADETYPRWVTTACLLDYDTMAAADKFGNICIVRLPPNTSDDVDEDPTGSKALWDRG
LLNGASQKAEVIINYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctacaacctgaccctgcagagggcgactggcatctcccatgccatccatgga
aacttctctggaactaagctgcaggagattgttgtttcccgtgggaaaattctggaactg
ttgcgtcctgatgctaacactggtaaggtccacacgctgcttactatggaggtgtttggt
gtcatccgatccctcatggctttcaggttgactggtggtactaaagactatgttgtggtt
ggaagtgactctggccgtattgtgatcttggagtaccatccttctaagaacatgtttgaa
aagatacaccaggagacgttcggcaagagcggctgcagacgtattgtgccagggcagttc
ctcgctgtggacccaaagggcagagcttttatgataggtgccatagagaagcagaagttg
gtatacatcctgaatagagatgcagctgctcgccttaccatctcctcccctctagaggcc
cacaaggctaacacactcgtctaccatgtagttggtgtggatgcgggctttgagaacccc
atgtttgcctgcctggagatggactatgaggaggcagataacgatcccactggagaggct
gctgctaacacacagcagactctgaccttctatgagttggacctgggcctcaaccacgtg
gtgcgcaagtacagcgaggcactggaggaacacggcaacttcctcatcacagttcctggt
ggttcggatggtcccagcggtgttctcatttgctctgagaactatatcacctacaaaaac
tttggggaccagccggacatccgttgcccgatcccacgcagaaggaatgacctggatgat
cctgagcgaggcatgatctttgtctgctctgccacgcacaagaccaaatcaatgtttttc
tttctagcccagacagaacagggagacatttttaaggttactctggaaactgatgaggag
atggtgaccgagatcaggatgaagtattttgataccatcccagtggctacagccatgtgt
gttttgaagactggcttcttatttgtttcttcagagtttggaaaccactacctgtatcag
attgctcacttgggtgatgatgatgaggaacccgagttttcctctgccatgcctctggag
gagggagacacattctttttccaacctcgaccccttaagaaccttgtgctggtcgacgag
caagaaaatctttctcccatcatgtcctgccagattgccgatttggctaatgaagacaca
ccacagctgtatgtggcatgtggcagaggacccagatctacactcagagttttgagacac
ggactggaggtttcagaaatggctgtttctgaactgccaggtaaccccaatgccgtgtgg
actgttaggagacatgtagaagatgagtttgatgcctacatcatcgtgtctttcgttaac
gccaccctggtgctttctattggagagactgtggaagaagtgacagactctggtttcttg
ggcacaacacccaccctgtcttgctcgttgcttggggaagatgcacttgtacaagtctac
ccagatgggatccgtcacatccgtgcagataagagagtgaatgaatggaagaccccgggg
aagaagacaattgtccgatgtgctgtcaatcagaggcaggtggtcattgctttgactgga
ggagagctggtctactttgagatggacccgtccgggcagctgaatgaatacactgagagg
aaggagatgtctgcagatgtggtgtgcatgagtttggcaaatgtgcccactggtgagcaa
cgttcccgtttcctggctgttgggttggtggacaacacagtccgcatcatctccctggat
ccatccgattgtctgcagccgttaagtatgcaggctcttcccgcccagccagagtctctt
tgtattgtggagatgggaggagttgaaaagcaggatgagcttggagaaaaaggcaccatt
ggcttcctgtacctcaacattggcctgcagaatggagtgttgctgcgtactgttttggat
ccagtgactggagacctgtctgatactcgcactcggtatctcggttctcgccccgtcaag
cttttcagagtccggatgcaggcccaagaagctgttctggccatgtctagtcgttcctgg
ctgagttactcataccagtcccgtttccacctgactccattgtcatatgaaaccttagag
tatgcatcagggttcgcatctgaacagtgtcctgagggtattgttgccatttccactaac
acactgaggattctggctcttgagaaactgggtgccatcttcaaccaagtggctttccca
ctgcagtacacccctcgcaaatttgtcatccacccagagacaaataacctgattctaatc
gaaacggaccacaatgcctacactgaagccaccaaagcccagcgcaagcaacagatggct
gaggaaatggtggaggcagcaggggaggatgaaagagagctggctgcagaaatggcagca
gctttcttgaacgagaacctgccagaaaccatctttggggcacctaaagcaggctctgga
cagtgggcctcactagtgcgcatgatcaacccaattcagggcaacacactggacctggtg
cagctggaacagaatgaggctgctttcagtgtggctgtatgccgtttttccagtggaggt
gatgattggtatgtgttggtgggagttgccagagacatgatactaaatccacgctctgtt
ggtggaggttatatttatacctatcggctggtaggaggtggggacaagctggagtttttg
cacaagacacccgtggaggacgtgcccctagctattgctccctttcagggacgagtgttg
gttggagtgggcaaactcttgcgcatctatgacctggggaagaagaaacttcttcgcaag
tgtgaaaacaaacatgttcctaacttggtaacaggcatccacactatcgggcagcgtgtg
atagtgtccgatgttcaggaaagtctattctgggtgcgctacaggcgcaacgagaaccag
cttattatctttgctgatgaaacctatcctcgttgggtcacgactgcctgcctgcttgat
tatgacaccatggctgctgcggataagtttggaaatatctgcattgtccgcctgcctccc
aacaccagtgatgatgttgatgaggaccccacagggagcaaagcattgtgggacagagga
ttgcttaacggagcatcacaaaaggctgaggtgattattaactatcacataggagagact
gtgctgtccctccagaaaacgaccctcattcctggaggatctgagtctctggtgtacacc
acgctgtcaggaggcattggcatcctggtgccgttcacttctcatgaggatcatgacttc
ttccagcacttggagatgcatatgcgctctgagtttccccctctgtgtggtcgtgatcac
ctcagctttcgctcctactatttcccagtaaagaatgtgatcgatggagacctttgtgag
cagtttaactccatggacccacataagcagaagagtgtgtctgaggaattggaccgcaca
cctccagaggtatcgaagaaactggaagacatccgaacacgctatgctttctag
DBGET
integrated database retrieval system
