Carassius auratus (goldfish): 113061472
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Entry
113061472 CDS
T07313
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04115
p53 signaling pathway
caua04120
Ubiquitin mediated proteolysis
caua04137
Mitophagy - animal
caua04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113061472
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113061472
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113061472
09143 Cell growth and death
04115 p53 signaling pathway
113061472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113061472
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113061472
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
113061472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
113061472
NCBI-ProteinID:
XP_026086389
Ensembl:
ENSCARG00000065769
UniProt:
A0A6P6LPH3
LinkDB
All DBs
Position
43:complement(3654563..3675156)
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AA seq
334 aa
AA seq
DB search
MSASIRLQPVYSWKGVLKLFSCIAARTAIKPKEVHTFQGKKKDVLGNHMDEEMSRQTATA
LPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPK
LTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSC
PCPGASCKWQGSLDAVMPHLLHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFH
FMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIA
TAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcctctattagactacagcctgtgtactcatggaagggggtgctcaagctcttc
tcttgcatagcagccagaactgctattaaacctaaagaggtccacacatttcaaggaaag
aagaaagacgtacttggaaatcatatggacgaagaaatgagtcgccagactgccacagcg
ctacccacaggaacctcgaagtgtcccccttctcagcgcgtccctaccttgtcgggcacc
accgcatccaacagtgaccttgccagcctgttcgagtgcccagtctgttttgactatgtg
ctgccgcccatcctgcagtgccagagcggccatttggtttgtagcaactgccggcccaaa
ctcacctgctgccccacctgcagaggcccgcttggttcaatacgcaatttggcaatggag
aaagtggccaactcagtgcttttcccatgcaagtatgcctcatcgggctgcgaagtcacc
ctaccacacacagacaaggctgaacacgaggagctttgtgaattccggccatactcttgc
ccctgtcctggcgcctcctgcaagtggcagggatctctcgacgccgtcatgccccacttg
ctgcaccagcacaagtccataaccacgctacaaggtgaggatattgtcttcctggccaca
gacatcaacttgcctggggcagtggactgggtcatgatgcagtcatgcttcggcttccat
tttatgcttgtgctggagaagcaggaaaaatatgatggccaccagcagttctttgccatc
gtgcagctgattggcacacggaaacaggcagaaaactttgcctaccgactggagttgaat
ggccaccggcggcgcctcacctgggaggccacgccacgctccatccatgagggcattgcc
accgccatcatgaacagtgactgccttgtgtttgacacctcgattgctcagctgtttgca
gagaacggcaacctgggcatcaacgtcaccatatccatgtgctga
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