Carassius auratus (goldfish): 113061583
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Entry
113061583 CDS
T07313
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113061583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113061583
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113061583
mRNA degradation factors
5'-3' decay
Decapping complex
113061583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EDC4L
WD40_Prp19
Pdc1_Ge1
WDR55
Phage_min_cap2
EIF3I
Motif
Other DBs
NCBI-GeneID:
113061583
NCBI-ProteinID:
XP_026086589
Ensembl:
ENSCARG00000040193
UniProt:
A0A6P6LQ28
LinkDB
All DBs
Position
43:complement(7001459..7028783)
Genome browser
AA seq
1411 aa
AA seq
DB search
MDTSSNMDIEGATQHLRDILKLDRPGNSAESSLVESQRKPSFNGEMNGVLGADLIGAGLM
EPTTHNSDKLNGQDTQTICLSGDDGSTCVPIRANNVEIVSSRDSSIDSKARGSNKVKIQP
VAKYDWEHKYYYGNLIAVSNSYLAYAIRGANNHSMIRVLRLGSTERSLLKGFTGAVTDLA
FAHLDSTLLGCVDEAGNLFIWQLTSHNSKIQDEVFVHIRRPEDTPLNSNRRLIWCPFIPE
DNDESPEDACQTLALLHEDRAEVWDLDILRSNNTSWPVDATDLKEGFITIRGHTARISEG
ALSPDGTVLATASHDGYVKFWQIYIEGQDQPSKCSYDEHKRLISKTQNLTNEPTKRCLHE
WQPQNGRPLSCLLFCDNHKKQDPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPD
PFNSSVLPSLKASLDLSAEFLILSDVQRKVLYVMELLQDQEQGRASFTAVSEFLLTHPVL
SFGIQDVARTRLRHTEVLPPDEESESMTTEGNQGPSESKSGIQIKLYCVHTKSLQDVQIW
FQPNQGASSSLFMPQSGSQDGFGFSDPLADLNVEAMSSDKESGDSGSHNDLSKILALPTP
ADFMSPAPSALPKLMTPDAFMTPSTSMPASPGSSASSLTIVTAMSSSDSGARGGDDLAQS
PKMSVECGNSSLTLSASAGSPRSNSILITGLGENLQVSPPNPPLSLDLQAIEPMVVPQAS
PTRARSPDVISSASTAMSQDIPEIASETLQRGLASAAADSNPVLHSDSMASAASVLHLLS
PRARSSAEHSLLPLELGAASVDGEQRLNNTPSLLETALSQENAVAAGGSCSDSSVNHTWP
AAPDITRETRNSLRDNGLGDCSREEIKDRHISSPYHRRTYHLTQNDSQDASAEQSDHDDE
VASLASSSGNCGPRSSHRLPVKDWKTSPRSSPKLKRKSKKDEGESSQPRQIENQMSTEVQ
DELLQMLRSQQREIAELRQNQLDLLQRVTCHMDAVQSSIMAHIEHAMLAQQEQEQRRMER
ILAEGQSRNQQLQDQLVQQLVQTLNNSLCNRLDKVLREEMKKTVPQTISKSLEPVTSQLN
STIAAKLTAVEGTLKENVTKVVKSKNTTDAIGRAAAEAMQGPIQSAYKETFQGIVLPVFE
RGCQSMFQQINDSFKQGTHEYIQQLETHIKNRKQQDQDARDPVIGQLQQMMDTLQSSQDQ
LATTVTASVCSDVQRQLHMIVGNLQDSILTQVQRIVKGEVSLAMKEQQAAVTSSIMQAMR
SAAGTPVPSAHLDYQAQQASILQLLQQGQLNEAFQQALSAADLNLVLYVCETIDSQQVFG
QQPCPLHQAVLLSLIQQLSTNLSTRTELKISYLEDAVMNLDHGDPVTRDHMSAVLTQVRQ
KLLHFLQQDAHSPLSKRARRLMMMLQGLVNH
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atggataccagttccaacatggacatagaaggcgcgacccagcaccttcgggacatctta
aaactggatcgtcccggtaattcggccgagtcatcattggtagaaagccagagaaaacca
tctttcaatggagagatgaatggtgttcttggagcagatcttattggagcaggactgatg
gagccaactactcacaactcagacaaacttaatggacaggacacgcagactatctgtctt
tcaggagacgatgggtccacctgtgtccccatcagagcaaacaatgtggaaattgtgtcc
agtcgtgactctagtattgacagtaaggctcgaggcagcaacaaggttaaaattcagcca
gtggccaaatatgactgggagcacaaatactactatggcaatttaatagctgtgtccaac
tcttacttggcttatgccatcagaggtgcaaacaatcattctatgatccgagtgctgcgg
ctgggatcaacggagcgttcgctgctgaagggcttcacaggtgcagtcacagaccttgct
tttgcccacttggactccaccctgttgggctgcgtggatgaggctggaaacttgttcatt
tggcagctcacaagccacaacagcaaaatacaagatgaagtgtttgttcacatccgaagg
cctgaggacactccactaaattccaaccgcagactcatctggtgtcccttcatcccggag
gacaatgatgagagcccagaggatgcgtgtcagacattggcactccttcatgaagacaga
gctgaggtttgggaccttgacatcctccgatccaataacacctcgtggcctgtggatgcc
actgacctgaaagagggtttcattaccattagaggacacacagcacgcattagtgaggga
gcactgtcccctgatggcactgtcttggccacagccagtcatgatggatatgtaaagttt
tggcaaatctacattgaaggacaggaccagcccagtaaatgcagctatgatgagcataag
agactgatttcaaaaacacaaaatcttaccaacgaaccaaccaaacgatgcctgcatgaa
tggcagccacaaaacggacggcctctttcctgcctgctcttttgtgacaaccacaagaag
caagacccagaagttcctttctggcgcttcctgatcactggagctgatcagaaccaggaa
ctgaagatgtggtgcacagtgtcatggacgtgcttacaaaccatcaggttctctccagat
ccattcaacagcagtgtgctacccagcctgaaggccagtttggacctgtctgcagaattt
ctcattctcagtgatgttcagaggaaggtgttgtacgtcatggagctactacaggatcag
gaacaaggccgtgccagcttcactgcagtttcagagtttctgcttacacaccctgtgctc
agcttcggcatacaggatgtggcccgcacccgactgcgccacactgaggtccttccacct
gatgaggaaagcgaaagcatgacgacagaaggaaaccagggaccctccgagtccaaatca
ggaatccagattaaactctactgcgtgcatacaaaatcactacaggatgtgcagatctgg
ttccagcccaatcagggggcctcatcctccctcttcatgcctcagtctgggtcccaggat
ggctttggtttttctgacccactggctgatctgaacgtggaggcaatgagctctgataag
gagtctggtgatagtggatcacacaatgacctgagtaagattctggctcttccaactcca
gctgacttcatgagtccagccccttcagccttgcccaaactcatgaccccagatgccttc
atgacgcccagcacctccatgcctgcttctcctggcagcagtgcaagcagcctgaccata
gtcacggccatgagcagctcagatagcggtgcaagaggtggagatgatctggctcagagc
cctaaaatgtctgttgaatgtggcaacagcagcttgactctgagtgccagcgcaggcagc
ccaagatccaactctatcctcatcacaggccttggggaaaatcttcaggtttccccccca
aaccctcctctctccctggatctccaggccatagagcccatggttgtcccccaggcctct
ccaaccagagctcgctctccagatgttatctcctctgcttctacggcaatgtcccaggac
atccccgagatcgcctcagagaccctgcagagggggctggccagtgccgctgctgactca
aaccctgtcctgcattctgacagcatggcatcagccgcatcagtcctccacctgttgtct
cctagagcccggagcagtgctgagcacagtttgctgcctctcgaattgggtgcagcatct
gtggatggagaacagagactcaataacacaccttcactgctggagacggctctgtcacag
gagaacgcggtagctgctggaggatcctgttctgacagcagtgtgaaccacacctggccc
gcagcacctgatatcacacgagaaactcgcaacagcctcagagacaatggtttgggagac
tgctctagggaggaaataaaggacagacacatttcctctccctaccacagacgcacttat
cacctgactcagaatgacagtcaagatgcaagtgcagagcagagtgatcatgatgatgag
gttgccagtctggcctcttcctcggggaactgtggccctcgctcctctcacagacttccc
gtaaaggactggaaaacatctccgcgcagctcccctaagctcaagaggaagagcaagaag
gatgaaggagagtcctcacagcctcgacagattgagaaccagatgagcacagaggtgcag
gatgagcttctacagatgttacggagccagcaaagggagatcgctgagctgagacagaac
cagctggaccttctgcagagagtcacctgtcacatggacgctgttcagagctccatcatg
gctcacattgagcacgccatgttggctcagcaggagcaagaacagagaagaatggagcgg
attctggctgaaggacaaagccgaaaccaacagctccaggaccagctggttcagcagctt
gtccagacactgaacaacagtctctgcaatcggctagacaaagttttgcgtgaagaaatg
aagaagaccgtcccacagacaatatcgaagagtctagaacctgtgaccagccagttgaac
agcaccattgctgccaagttaaccgcagtagaaggaacattgaaggaaaatgtcaccaaa
gttgttaaatccaagaacactacggatgctatcggccgtgctgcagctgaggccatgcag
ggtcccatccagtcagcctacaaagagaccttccagggcattgtgctgcccgtgtttgag
agaggctgccagtccatgtttcagcaaatcaatgacagcttcaaacagggaacacacgag
tacatccaacagctggagacacacattaagaacaggaaacagcaggaccaggatgcacgg
gatcccgtgattggtcagctgcaacagatgatggacacgctccagagttctcaagaccag
ctggccaccactgtgacggccagcgtgtgctctgacgtccagcgtcagctccacatgatc
gtgggaaatctgcaggactcaatcctgacgcaggtacagcgcatagtgaagggagaggtg
agtctggccatgaaggagcagcaggcagctgtcacctccagcatcatgcaggccatgcgc
tcggccgcaggaacacctgtaccctctgcacatctggactaccaggcccagcaggccagc
atactacagttactacagcagggccagctcaatgaggccttccaacaggctttatccgca
gcagacttgaatctggtgctgtatgtgtgcgagaccattgactcccagcaagtatttggc
cagcagccctgtccactgcatcaggccgtccttctgtctctcatccagcagctttccacc
aacctgagcacacgcacagaactcaagatcagttatcttgaagatgctgtaatgaacctg
gaccatggcgatccagtcaccagagaccacatgtctgcagtgctgacccaggtacgacag
aagctcttacacttcctgcagcaggacgcccacagccctctgagcaagcgcgcacggcgc
ctcatgatgatgctgcagggcctggtcaatcactag
DBGET
integrated database retrieval system
