KEGG   Carassius auratus (goldfish): 113061618
Entry
113061618         CDS       T07313                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2-like isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    113061618
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:caua01009]
    113061618
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:caua03021]
    113061618
Protein phosphatases and associated proteins [BR:caua01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     113061618
Transcription machinery [BR:caua03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     113061618
    Little elongation complex (LEC)
     113061618
SSDB
Motif
Pfam: ELL Occludin_ELL CMS1 DUF2663
Other DBs
NCBI-GeneID: 113061618
NCBI-ProteinID: XP_026086680
Ensembl: ENSCARG00000049411
UniProt: A0A6P6LQ75
LinkDB
Position
43:complement(8701362..8758425)
AA seq 588 aa
MAALRQEQRYGLSCGKINKSIPNKTIFHVKLTDTAIRTLEAYKNLKGSLPNQPAICFKGN
QGYIKIPASLDSPDAFRVFSFYLSSDSKDKPQASFDCIQQYISGDGREHLESQGSIQDKI
TVCATDDSYQMTRERMSQVEKDIWSRSAIEIKPGSTHPSKCVKIKKKQGLPTSLDNTNRH
SPSNKKNGTPSLVATRPLKERVIHILALKPYSKPELLLWLEREKASPKDKVDLSAVLDEV
AKLNPKDSSFTLKDDFYRHVRRDWPGYVEEERQLIQRVLARKLQPLSSSSSQLKSVQSSH
SFHKTSGDSPSQLSPVKNLSMKRPVPSDHPESQTPKKQRLLDQNKLLQSPSNRHLSSSMG
RSSSAHGNTSTAQQSPNGLSQRHKLGESNSVPKPEPAQQPSSSPKHTRTEPAICTDQQLA
NGQHKKKSKKHKEKERERLKPEWVETSSDLKQNQENVKDHERPNTPVSRSSPDELPDYLL
KYNTITDSEQQQRYKEDFCAEYDEYRDLHERIGKVTEIFVQLGSKIKTLSPGTHEYKVME
VQIMEKYRKYKKKFPGYREEKKRCEYLHQKLSHIKDLILDYDRSQTPS
NT seq 1767 nt   +upstreamnt  +downstreamnt
atggcagcgttgagacaggagcagcggtatggactctcctgtggaaagattaataaaagc
attcccaacaaaaccatctttcacgtcaagctaaccgacacggccatccggacgctggaa
gcttataagaatctcaaggggtctttaccaaatcagccagcaatttgcttcaaggggaac
caggggtatatcaagatacctgcttccttggattctcctgatgctttccgtgtcttctcc
ttctatctgtccagtgacagtaaagacaaacctcaggcaagcttcgactgcattcaacag
tatatttctggagatggcagggagcatctggaaagccagggcagtattcaggacaaaatc
acggtgtgtgccaccgacgattcctatcagatgacccgcgagcgcatgtctcaagtggaa
aaagacatctggagtcgctcagccatcgagatcaaacctggatccacacatccgagtaaa
tgtgtgaagattaagaagaagcagggcttgccgaccagcttagacaacactaacagacat
tcacccagcaacaagaagaacggtacacctagcttggtggccaccaggcccttgaaagaa
cgtgttattcacattctggccttaaagccctacagcaagcctgaactactgctctggctg
gagagggagaaagccagtcccaaggacaaggtcgacttgagtgctgtgctggatgaggtg
gctaaactcaatcccaaagacagcagctttacactaaaggatgatttctacagacatgtg
cggagggactggcccggctatgttgaagaagagcggcaactcattcaaagggtgttggca
agaaaactccagcctctcagcagcagcagtagccagttgaaaagtgtccagtccagccat
tcattccacaaaacctcaggggattctccatcccagctcagccctgtcaagaatctctcc
atgaaacgcccagtgccttccgaccatccagaaagtcagacgccaaaaaagcaacgttta
ttagatcagaacaagctcttgcagtctccttccaatagacatctcagctcctccatgggc
cgtagctcttctgctcatggaaacacaagtacagctcagcagagccctaacggtctttcc
cagcggcacaagctcggcgagtccaacagcgtgcccaaaccagaaccagcacagcagcca
tcgtccagccccaaacacacaagaactgaaccagccatctgcacggaccagcagctagca
aacggccagcacaaaaagaagtctaagaagcataaagaaaaggagcgagagcgcttaaaa
cctgagtgggtcgagaccagttcggacctcaaacagaaccaggaaaatgttaaagaccat
gaacgacccaacacacctgtctcccgttcctcgcccgacgagctgcctgactatttatta
aaatacaacactattaccgactccgagcagcagcagaggtacaaagaggatttttgtgcg
gagtatgatgagtatagagaccttcatgaacgcatagggaaagtcacagagatatttgtt
cagctgggatccaagataaagacgctgtctcctgggacacatgagtataaggtaatggaa
gttcaaataatggagaagtataggaagtataagaagaagtttccaggctaccgggaagaa
aagaagcgctgtgagtatctccatcagaaactatcacacatcaaggacctgattctggac
tatgaccgctcacaaactccctcctag

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