Carassius auratus (goldfish): 113061667
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Entry
113061667 CDS
T07313
Name
(RefSeq) homeobox protein six1-like isoform X1
KO
K15614
homeobox protein SIX1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113061667
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
113061667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
APP_N
Motif
Other DBs
NCBI-GeneID:
113061667
NCBI-ProteinID:
XP_026086764
Ensembl:
ENSCARG00000068093
UniProt:
A0A6P6LQK2
LinkDB
All DBs
Position
43:10177481..10180956
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AA seq
231 aa
AA seq
DB search
MAMGFSPEQVACVCEVLLQSESMDRLSSFLCSLPSNVYLGMAHSQESVLKARAAVAFHHC
RFAELYALLEGNVFSPRSHPLLQQLWLQAHYKEAELQRGHPLGAVGKYRIRHKFPLPRTI
WDGEETSYCFKERSRSVLRECYCRKPYPSLREKRDLAAATGLTATQVSNWFKNRRQRDRA
AASRQGRTSAGAFLSSDEELSPPASPSTLFSCSQQLSPHTSPLRHLGPTHY
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgggcttctccccagaacaggtggcgtgtgtttgtgaggttcttctccagagt
gaaagcatggatcgcttgtcctcgttcttatgctctttaccttccaatgtgtatctggga
atggcccacagtcaagagagcgtgctgaaagcgcgggctgcggtcgccttccaccactgt
cgtttcgctgagctctacgccttgttagaagggaacgtgttctccccgcgcagtcaccct
ctgctccagcagctctggctccaggctcactacaaggaggctgaattacagaggggccac
cctcttggggccgtggggaagtaccgaatccgccacaagttccctcttcctcgtaccatc
tgggatggagaggagaccagctactgcttcaaggaaaggtctcgcagtgtattgcgagag
tgctactgcagaaagccgtacccctcgctgcgagagaaacgagatttggctgcagccact
ggactcactgccacacaagtcagcaactggttcaagaaccgtcgacagcgggacagagct
gcggccagccgtcagggcaggacatcagcaggagcgttcctgagctctgatgaggaactc
tcaccgccggcgagtcccagcacactcttctcctgctcccagcagctctctccccacacg
tcccctctacgtcacctgggaccaacacactactga
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