Carassius auratus (goldfish): 113061709
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Entry
113061709 CDS
T07313
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113061709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113061709
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
113061709
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
HECT type E3
113061709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
113061709
NCBI-ProteinID:
XP_026086853
Ensembl:
ENSCARG00000054246
UniProt:
A0A6P6LQP1
LinkDB
All DBs
Position
43:complement(11766637..11817029)
Genome browser
AA seq
2094 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPIDHTLAGRLQPEQVNQKANSPPESRRSNSKASKAP
PSSAVGSARGHASRRNILSLSVGSHSIPDPDLEAAGSSGEQGRREGSSTRALKRSSASEL
NITFSPSPAKRPKAVPSHLFESSSSGPSAPTTSPEVTETRKAPASVSTKSKKRRLAAEPA
PARALSKKSTSYTGPSGASITPSQKRKKADASSLSSSSPSSLPSSSSAAGPLPPRSEASR
AAKPTKLASKSAASAKAGCSTVTDSSSSASSSSSSSSSSSAATGANSCAPQGARLKQGKD
QSKVRRSRSASSPSPRRSSRDKEQSKAAGSSKFDWTSRFNSKVNLPKPKLSLPGSAKAET
SSKPGPSGLQAKLASLRKSTKKRSESPPAELPSCRRSTRQKTTGSCASTSRRGSGLGKRG
AAESRRQEKMADSDNNQDGANSSAARTEETPQGASASSSVAGAVGMTTSGESESDDSEMG
RLQALLEARGLPPHLFGPFGPRMSQLFHRTIGSGASSKAQQLLQGLQAAGDESQQLQAAI
EMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHASRALTYMMEALPRSSAVV
VDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQR
NALAIAANCCQSITPDEFHFVSDSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENL
LQQVASRDLLTNIQQLLVLTPPVLSSGMFIMVVRMFSLMCSNCPCLAVQLMKQNIAETLR
FLLCGASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPREGIFAVDAMLKKGSAQTIE
GAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTGT
ARAIQRKPNPLANPNTGGHFEVRREDARAQLMKEDPELAKCFIKTLFGVLYEVYSSSAGP
AVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIASMLSSQDLKIVVGSLQMAEILMQK
LPDVFSVYFRREGVMHQVKNLAESEVFLTSPPKACTSGTASLCTTTITTATTTAASNVTP
DLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTT
TQSPKSSFLASLNPKTWGKLGNQTNSSNSEPSRTAGVSGLARVPPKDSVSNNRDKIKAWI
KEQASKFVERYFNSESLDGSNPALNVLQRLCTATEQLNLQVDSGVECLEEISTIVSESDV
SSFEIQHSGLVKQLLLYLTSNSERDTISRDERIKRFLHVFFGCPIPGQEPLGRLDLTENG
PLLALVHKMNNCLSQMEQFPVKVHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCTN
VKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNSG
CVRHRLQFYIGEHLLPYNMTVYQAVRQFSLQAEEERESTDDEANPLGRAGIWTKTHTIWY
KPVREDEEGCKDAVGGKRGRAQTAPTKTSPRNAKKQDELWHEGVCPSVTNLLESYLISGP
PEGITFDDPSMEVVLLLRVLHSISRYWFYLYENAACKEIIPSGEFINSKLTAKANRQLQD
PLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQ
DSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTQEFYALV
SQELQRADLGLWRGEEVTLSNPKGSQEGTKYMFSSRGLFAVPFGRTTKPAHIAKIKMKFR
FLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHESSISSHDLVNIDPGVAKSIQHLEDIIRQ
KKRIEQDRSHTRETLQQALESLNMNGCSVEDLGLDFTLPGFPNIELKKGGKDVPVTIHNL
EEYLRLVVYWTLNEGVSRQFESFREGFESVFPLQHLQCFYPEELDQLLCGSKSESWDVKT
LMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPLTI
VRKTFESTETPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6285 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacaca
gccgcggcccagccaatagaccacacacttgcaggaaggttgcagccagagcaagtaaac
caaaaagcaaattccccacctgaaagtagaagatctaattctaaggcttccaaagcccca
cccagctctgccgtcggctccgcccgcggccacgcctctcgaaggaacatcctctctcta
tccgtgggttcacactcgattccagatccagacttggaagcagcaggttcttcaggcgag
caggggagacgggagggcagcagcacccgtgctctcaaacgcagctccgcttcagagctc
aacattaccttttcacccagcccggccaagcgacccaaagcggtgcccagccaccttttt
gagagttcatccagtgggccatcggcccccacaacctcacctgaagttacagagacgagg
aaggctccagcgtctgtcagcaccaagtccaaaaagagaaggttagcagccgagccggct
cccgccagagctctgagcaagaagagcacatcttatacaggccctagtggggcctcgatc
accccctctcaaaagcgcaagaaggcagacgcctcttcattgtcatcctcctctccttca
tccctccccagctctagcagtgcggcaggccccctgccaccccgcagcgaggccagccgg
gcagccaaacccaccaagctggcgtccaaatcggccgcctcagccaaagctgggtgtagc
accgtgactgactcctcttcctctgcctcttcctcatcctcctcttcctcttcctcctcg
gctgccacaggcgccaacagctgtgcccctcagggtgcccggctaaaacagggcaaggac
cagagcaaagtccggcggtcacgctctgcatcctccccttctccccgaaggagcagccga
gataaagagcagagcaaggctgctggctcatccaagtttgattggacatcccgcttcaac
tccaaagtcaacctgccaaagcccaaactgtccctgccgggatcggccaaggctgagacc
tcctctaagcctgggccctccggactgcaggctaaactagcaagtttgaggaagtccact
aagaagcgtagtgagtctcccccagcagagctccccagctgtcggaggagcacacgtcag
aagaccacgggctcttgtgccagcaccagtcggcgaggctcaggcctgggcaagcgcggg
gcagctgaatctcgccgacaggagaaaatggccgactctgacaacaaccaggatggggcc
aattcatcagccgcgcgcacagaggagacaccacaaggggcatcagcatctagctcagtg
gctggagctgttggcatgaccacctctggagagagtgaatcagatgactctgaaatggga
agactgcaagctctactggaggccaggggccttcctcctcacctgttcggcccatttggg
ccccgtatgtctcagctgtttcataggaccatcgggagtggagctagctcaaaggcacag
cagctgctgcaggggcttcaggctgcaggagacgaatcccagcagctccaggctgctata
gagatgtgccagctgctagtgatgggcaatgaggagacactgggaggattccccgtcaag
agcgtcgtacctgccctgatcacactgttacagatggagcataattttgatattatgaat
catgcatctcgcgccctcacctacatgatggaggctctgccacgctcctcggctgtggtg
gtagacgccatccctgtcttcctggaaaagcttcaggtaatccagtttatcgatgtggca
gagcaagccttgaccgccctggaaatgttgtcacggaggcacagcaaagccatcttacag
gctggaggtctggctgactgtttgctgtacttggagttcttcagcatcaacgctcagagg
aacgcattagccatcgctgctaactgctgccagagcatcacgccggacgagtttcacttc
gtctcggactctctgcccctgctcactcagagactcacacaccaggataaaaaatctgtc
gaaagcacttgtctctgttttgccaggctggtggacaactttcagcatgaggagaatctg
ttacagcaggtggcgtcacgggacctgctgaccaacatccagcagctgctagtgctcact
ccacccgtgctcagctccggcatgttcatcatggtagtgcgcatgttctcgctcatgtgc
tccaactgcccgtgcttggccgtgcagctcatgaaacagaatatagcagagaccctgcgt
ttcctgctctgtggagcatctaatgggagctgtcaagagcagattgaccttgttcccaga
agcccccaggagctttatgaactcacctcactcatctgtgagctgatgccatgtctgccc
agagagggcatctttgcggttgatgccatgctgaagaaaggcagtgcccagaccatagag
ggcgccatctggcagtggagagatgataggggcctgtggcacccatacaaccgcattgac
agccgcatcattgaaactgcacaccagaacggagaagacgagataagtctgtcgacactt
ggccgtgtctacacaatcgacttcaactctatgcagcagataaatgaagacactggcact
gcccgagccattcagagaaaacccaaccctctggccaaccccaacacaggggggcacttt
gaggtgcggcgagaggacgcacgagctcagctgatgaaagaggacccagagctggccaag
tgcttcataaagactctgtttggggttctgtatgaggtgtacagctcctcagccgggcct
gccgtcagacacaagtgccttagagccatcctccggatcatctacttcgcagatgcagag
ctgcttaaagatgtactgcgcaaccatgctgtgtctagccacatagcttccatgctgtcc
agtcaggacctgaagattgtagtcggctctctgcagatggctgagatcctcatgcagaag
cttccagatgttttcagtgtatatttcaggcgtgaaggtgtaatgcaccaggtaaagaac
ctagccgaatctgaggtgttcctcaccagccctccgaaagcgtgcaccagcggcacagct
agtctttgcaccaccaccatcacaacagcaaccactacagctgcctccaatgtcacaccc
gacttaggctcgcccagtttccagcacagcatggacgactcgctggacctcagtccacag
ggtaggttgagtgacgttctcaaaagaaagcgccttcctaaaagaggaccaaggcgtcca
aagtactccccaccaagagatgatgacaaagtggataatcaagctaagagcccaacaacc
acacagtcccccaagtcctctttcctggccagtttaaatcccaagacctggggtaagctg
gggaatcagactaacagctccaactccgagccctcacgcactgcaggggtcagcggtctg
gcacgagtgccgcccaaggactcggtttcaaacaacagggataagataaaggcttggata
aaggaacaagccagcaaatttgtggagcgttactttaattcggagagtctggatggaagc
aaccctgcactgaatgtcctgcaaagactctgcactgccacagaacagctgaacttgcag
gttgacagtggtgtggagtgtctagaggagataagcactattgtatctgaatcagatgtg
tcctcctttgagatccagcacagtgggcttgtgaagcagctgttgttgtatctgacatca
aacagtgaacgggacactatcagtagagacgagaggatcaagaggttcctgcatgtgttc
ttcggctgcccgataccagggcaggaacctctggggcgtttggacctgacagagaatggc
ccactgctggcattggtgcacaagatgaacaactgccttagtcagatggaacagttccct
gttaaagtgcatgattttcccagcgggaatggcaacggaagcaggggttcacaagccctc
aagttctttaacacgcatcagctgaagtgccagttgcaaagacacccagactgcaccaat
gtcaagcagtggaagggcgggccggtcaaaattgaccccttggccctagtacaggctatt
gagagataccttgtggttagagggtatggaaggatcagggaggaggatgaagacagtgat
gatgatggttccgatgatgagattgatgaatctttggctgcccagttcttgaattctggg
tgtgtacgtcacagactgcagttctatataggagagcacctgctgccctacaacatgact
gtttatcaggccgtcaggcagttcagcttacaggccgaggaggagcgagagagcacagat
gatgaagcaaatcctctggggcgggctggcatctggaccaaaacacacactatatggtat
aagccagtcagagaggatgaagagggctgtaaagacgctgttggagggaagaggggtcgt
gcacagacggctcccactaaaacctcccctcgaaatgccaagaaacaggatgaactgtgg
catgagggtgtgtgtcccagtgtgacaaaccttttagagtcatacctcattagtggtcct
ccagagggcatcacttttgatgacccttcaatggaggtggttctgctgctgagggtcctg
cactccatcagtagatactggttctacctgtatgagaatgctgcatgtaaggaaatcatt
cccagtggtgaatttatcaacagtaaactgacagcaaaggccaacagacagctgcaggat
ccgctggtcatcatgacagggaacattcccacctggctcactgagctcggcaaaacctgt
ccattcttcttcccgttcgacacgcggcagatgcttttctacgtgactgcatttgaccgc
gatcgcgccatgcagcgtctgctcgacaccaacccagagattaaccagtccgactcacaa
gacagccgcgtcgctcctcgccttgataggaagaagagaacgataaaccgtgatgagctc
ctgaagcaagcagagtcagtaatgcaagatctcgggagttccagagccatgctggaaatt
cagtacgagaacgaggtgggaacaggtctcggccctacacaggagttctatgctctggtg
tctcaggagttgcagagggccgatttgggtctttggagaggagaggaagtcactctctcc
aaccctaaagggagtcaggagggtaccaagtatatgttcagttccagagggttgtttgct
gtaccatttggtcgaactaccaagccagctcacatcgccaagatcaaaatgaagttccgt
tttcttgggaaactcatggctaaagcgatcatggacttcagattgttggacttgcctcta
ggcttgccattctataagtggatgctgaggcatgaatcctccatcagctctcatgatctg
gtcaacattgatcctggcgtcgccaaatccatccagcacctggaggacatcatccgccag
aagaagagaatagagcaggaccgatcacatacacgggagaccctacagcaggccttggag
agtctcaacatgaacggctgctcggtggaagatctgggcctggacttcactctgcctgga
ttcccaaacatcgagttgaagaaagggggtaaagacgtgccagtcaccattcacaacctg
gaggaatacctcagattggtggtctactggacgctcaatgaaggtgtgtctcggcagttt
gagtcctttagggaaggatttgagtcagtcttccctctgcaacatctgcagtgcttctat
cctgaagagctggatcagttgttatgtggcagtaagtcagagtcctgggatgtgaagaca
ctaatggagtgctgcagaccggaccacggctacacacatgacagccgtgcagtgcggttc
ctgtttgaggtgctgagcagttttgatgcagagcagcagagacttttcctgcagtttgtc
acgggcagccccagacttcctgtcggaggattccggagtttaaaccctcccctcactatc
gttcggaagacgttcgagtcgacagagaccccggacgacttcctcccgtcggtgatgacg
tgtgtgaactacctgaaactgccggattactccagcatcgagatcatgcgcgagaaactg
ttgattgctgcgcgcgagggccagcagtctttccatctgtcctga
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integrated database retrieval system
