Carassius auratus (goldfish): 113061865
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Entry
113061865 CDS
T07313
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
113061865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113061865
Membrane trafficking [BR:
caua04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113061865
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
113061865
RAVE complex
113061865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_IFT140_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_EML
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_LRRK2
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
VPS11_N
NBCH_WD40
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
113061865
NCBI-ProteinID:
XP_026087125
Ensembl:
ENSCARG00000069144
UniProt:
A0A6P6LRJ6
LinkDB
All DBs
Position
43:20485138..20552204
Genome browser
AA seq
3050 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVHDIPFTAYGSGCDIVILASDFECVQIIPGAQNGNIQV
GCVECSQQLGRIAASYGNTVCIFEPIASNPNKRHKQLNYQWQKTGQFFLSAITYNLAWDP
QGNRILAATECLQLWAPPSSDTLIEEEDSQLNDDRANELILNDWKCIWQCKTAAAVHITQ
WSPDGEYFATAGKDDCLLKVWYPTTGWKSAVVMPDVTDKKIPAVHFSFVYLAHPRMVTGF
SWRKTSKYMPKGSVCNVLLTSCADGICRLWSETLLPEDSLLGGQISENSTSFSSSLPNFA
QKDKIQHALESIHHLKHLRRGRRRSSALVAHTELLPSQLGSHETHRHISHHANALCHFHI
SASINPNTDIPAALAGSGLFSEDVSGGFMVHWLNNKDLSFTTSMDLFMQLLRKLSEQHLE
QTTEDFEQEGTTKFDFDLDEMSDKGSSEHEEGDQEGSTKASSPGSSSSVPLPSVMLDRKL
DALILEWNKNPDMLFTIHPLDGSFLVWHVKYLDEFIPGIFRQVQVSFSSRIPVAFPTGDA
NSLSKNIMMYTCTFMDKENCNALEDKRSERRVPQSASASAGLSAFGHSLAAVIGPAVMMV
SKHVDGSLNQWAVTFAEKSAFSNVLTVSHKFRYCGHRFHLNDLACHTVLPLLLTSSHHNA
LLTPPSGSGSTDGDQIGGVALQPTRPMRGIPGKQLRNAATRTFHDPNAIYSELILWRVDH
IGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGSYCNSASACFVASDGKNLRL
YQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQCGSNTQLLHV
FQEDFILGYKPHDDIPDFSSINVPAAEEYQPPPFSEKFYLVVIEKDANQNSVLQMWHLHL
RSVQACVEEPVNDHVFQNQLTVPLSQNYGDSSPDTTPAHSQLPRSSSSANLQSASKLILS
SKLVYSQRLDLPPGVELIRATPSAGHLSSSSIYPVCLAPYLIVTTCSDGRVRFWHCRVDM
ESSVPHPEETRSYQWEQWSLLKEEEDIDSSLCVAGRPVAVSCSYTGRLAVSFKQMLPENE
GSMPQDFSMLVSIYECESTGGSEWVLEQTIHLDDFSKPVKTLDPRVSVDSNLVVYSKSDL
FVTKDSPNIKHFVHLDWLSKEDGSHILTVGVGSNILMYGRISGVVTEQTGVKDGMAVTLP
LGGSIKQGIRSRWVLLRSVNLVSSVDGTPSLPVSLSWVRDGILVVGMDCEMQVYAQWRQD
EKPGNSDNNSISSPEGIGGRTISVSNEGRARSKSVFEGSAGIDDAFRPPAVIQDGGLFEA
AHSLSPTLPQYHPTQLLELMDLGRVRRAKAILAHLVKCIAGEVAVVRDVEAGEGGARRHL
SRTISVTGSTAKDIIVAGRDGGRDYTEISSIPPLPLYALLSADQDTSYKMGEEVGKGAER
ETQKQSEDQYSDLFQVQTVTTDDFVNFAAEKPEKKTRVINLSQYGPTYFGPEHAQVLSSH
LMHSSLPGLTRLEQMFLVALADTVATTSAEVAGPTDKQYTGGDALDECGLRYLLAMRLHT
CLLTSLPPLYRMQLLHQGVSTCHFAWAFHSEAEEEMLNMIPAMQRGDPQWSELRAVGAGW
WVRNINTLRRMVEKVAKAAFQRHNDPLDAALFYLAMKKKAVLWGLFRSQHDEKMTQFFSH
NFSEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVCLEKMEDIQLAMIVARL
YEADYESSSTCQGILYQKVLGCNRDGSGFSCTKLHPDPFLRSIAYWIMKDYTRALDTLLE
QIYKEDDKNPDVLVKSCNPVVFSFYNYLRAHPLIIRRHFAKPEASGVAVGITSERNCADE
INLIERKLFFTTANAHFKVGCPLLALEVLSKIPKVTKKASSLSKGSSVANVSAPQPKENG
GKASDLAWGAESSAGLDWSQPMVKMEDEGLQLDWGYDKEEDEEGGLTMKKPEVEDEEAKK
PSKSAAMQREGSKGESEVDVIAEQLKFRACLKILMTELRTLATGYEVDGGKLRFQLYNWL
EKEIEAMHYICNYKFEGKAAAGQLEKWGDDGSLDLEDSQIRGEAGAYERHQMERRRLQAK
QLHAERRKSWLRENQALLRVFLSYCSLHGAKGGGVTSVRMELLFLLQESQQEMTVKQLQS
PLPLPTTLPLLSASIAPTKTVIANPVLHLRNHIHDILYTTVQMEAPPHPDILDDRVNALH
TLAASLSACIYQSLCDSHSYSSQSETSQFTGMVYQGLLLSDRRRLRTESIEEHATPTTAP
AQWPGVSSLISLLACAQGDDQIRLNVMLCEAVVAVYLSLLIHGLGTHSGNELFRLAAHPL
NNRMWAAVFGGGAKLIVRPKRPPEITPASLESNRQTEFHSENKPAVPPPTPPAEDVDRQR
RRFNMRMLVPGRPVKETPATPPPIPVERPTYKEKFIPPELSMWDYFVAKPFLPLSDSGAL
YDSDESGGSDNEDDDDDDDDAFLSDTQMTEHSDPNSYSWSLIRLVMVKLALHNVKTFLPL
TGLDFTELPVTSPLANAVLKTLENWEQILQEKMNKFDSPPPNYINTYPTDLSAGGGPAIL
RHKAMLEPDNTPFKSKQRHSFPARRLWHFLVKQEVLQETLIRYIFTKKRKQSESLDDHVD
HLIKNYVTGAQKTNKMEADMGYPGGKAKIIHKESDIIMAFAINKANTNELVLASTHDVQE
VDVSSLLAAQPYTWIGEDCDKESRSSDDVDYRSSHTNIAQASAGPFAPQQMAASSSMPWL
GSGQTSMGASVIMKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWNRPQQLICFRQAGN
ARVTRLYFNSQGNKCGVADGEGFLSLWQVNQTSSNPKPYLSWQCHSKSCSDFAFITSSSL
IGTAGQSNDGRNVCLWDTLISPSNSMIHAFQCHENGATVIQYAPKQQLIITGGRKGFVCI
FDIRQRQLLHTFQAHDSAIKALAMDSTEDFFVTGSAEGNMKVWKLAGHGLMHSFSTEHAK
QSIFRNIGAGVMKIETCPGNRIFTCGADGTLKMRVLPDRYNIPPSIFQIL
NT seq
9153 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcaccaggtgctgacgggggccgttaacccgggggactgctgctactccgtg
ggaagcgtccacgacatcccgttcacggcctatggctcaggctgtgatatcgtgatcctt
gcaagtgattttgagtgtgttcaaattattcctggagctcagaatggaaacatccaggtg
ggctgtgtggagtgctctcagcagctcggccggattgctgcatcttatggaaataccgtt
tgcatttttgaaccaattgcttccaacccaaacaaacgtcacaagcaactgaattaccaa
tggcagaagactggtcagttcttcctcagtgctataacctacaatctggcctgggaccct
caaggcaatcgtatcttggcagcgactgagtgtttgcagctgtgggctcctccgagcagt
gacacgctgatagaggaagaggacagtcagctgaatgatgacagagctaatgagctcatt
ctcaacgactggaaatgtatctggcagtgcaaaactgctgctgctgttcacatcactcag
tggtctccagacggggaatactttgccacagctggaaaggatgactgcctgttgaaggtg
tggtatcccaccacaggatggaagtctgcagtggtgatgccagacgtgactgataaaaag
atcccagcggttcatttctcatttgtgtatctggcacatccgcgtatggtcacaggcttc
tcctggaggaagaccagtaaatatatgcccaagggctctgtatgtaacgtgttgctgacg
tcttgcgcggatggcatctgtcgtctgtggagtgagaccctcttacctgaggacagtctg
ttggggggacagatctcggagaacagcaccagcttcagctcctctctgccaaacttcgct
cagaaagacaagatacagcacgctctggagtctatccaccacctcaagcacctgcgaagg
ggccgcagaagatcgtccgccctggtagcccacacagagctgctgcccagccagctgggg
tcccacgaaactcaccgtcacatttcacaccacgccaatgccctctgccatttccacatc
tctgccagcatcaatcccaacacagatatccccgcagcactggctggatcgggcctgttt
tctgaggatgtcagtggagggtttatggttcactggctgaataataaagatctgagcttc
accacctccatggacctgtttatgcagctgctgcgcaaactttctgaacaacacctggaa
caaaccactgaagactttgaacaggaagggacaaccaagtttgacttcgatctggatgag
atgtctgataagggctcttcagagcatgaggagggcgatcaggaggggagcaccaaggcc
tcttctccaggttcgagcagcagtgttcctctgccctctgttatgctggatcgaaagctg
gatgctctcatcctggagtggaacaagaatccagacatgcttttcactattcatccgctt
gatggatctttccttgtctggcatgtcaagtatctggatgagttcatacctggcatcttc
agacaggttcaggtgtcgttctcctctcgtatcccagtggcattccccactggcgatgct
aattccctcagtaagaacatcatgatgtacacatgtacttttatggacaaagagaactgc
aacgctctggaggataagagaagtgagcggcgggttcctcagagtgcatctgcgtctgcg
gggctcagtgcttttggacactctcttgctgctgtcatcggccctgccgtcatgatggtg
tccaaacacgttgatggatcgctcaaccaatgggctgtgacctttgctgagaagtccgcc
ttttcgaatgtcctcacagtttcacacaagttccgttactgtggacaccgtttccatctc
aatgatttggcttgtcacaccgtccttcccttgctgctgacatcatctcatcacaatgca
ttgttgactccgccctctggatctggaagcactgatggagatcagattgggggtgtggct
ctacaacctaccaggccaatgagaggcattcctgggaaacagctgcgaaatgcagccaca
cgtacattccatgacccgaacgccatctacagtgagctgatcctctggagagtcgatcat
attggcccactctcctgcacagggggcgtgtcagagctagcacgaatcaactcgctccac
acatctgcgttctccaacgtggcctggctgccaacactcgtccctagctcagtgcttgga
tcatactgtaactctgcaagtgcgtgctttgtggcgtctgatggtaaaaacctgcgtctg
tatcaggctgtggtggatgcccgcaaactactggatgaactctccgacccagagacctct
aaactggtgggtgaagtattcaacattgtgagtcagcagtccactgcccgacctggctgc
atcatagagctggatgtcattacaaaccagtgtggctcaaacacacagctgctccacgta
tttcaggaggattttattttaggctacaaaccgcatgatgacataccagatttcagcagt
attaatgttccagctgcagaagagtaccagccccctcctttctcagaaaagttctacctg
gtggtgatcgagaaggatgcaaatcagaactcagtattacaaatgtggcatcttcatctg
cgctcggttcaggcatgtgtggaagagccagtaaatgaccatgtattccagaaccagctg
acagttcctttgagtcagaactatggtgactcatctcctgacaccactccagctcatagt
cagctgcctcgttcctcctcttctgccaacctgcagtcagccagcaaactcatcctgagc
tctaaactggtctacagtcagcggctagaccttccaccaggggtggagctaatcagagct
acgccctctgccggtcacttgagctcctcgtctatctaccctgtgtgtttggctccgtac
ctgattgtgaccacctgttctgatggacgtgtcaggttctggcactgtagggtggacatg
gaatcatcagtgccacaccccgaagagacacgttcatatcagtgggagcaatggagtctc
ttgaaagaggaagaagacatcgacagctctttgtgtgttgcgggccgacccgttgcagtc
agctgctcctacacgggaagacttgcggtgtcattcaaacagatgttgcctgagaacgag
ggtagcatgcctcaggacttctccatgcttgtatccatctacgagtgcgagtcgacgggt
ggctcggagtgggtcctggaacagacgattcaccttgatgattttagcaaacctgtgaaa
acgctagatccacgtgttagtgttgatagcaatttggttgtctatagcaagtcagatctg
tttgtaaccaaagacagccctaatatcaaacactttgtgcacctggactggctgtcaaaa
gaagatgggtcgcacatcctgactgttggggttggatccaatatccttatgtatggacgt
atctcaggggttgtcacagagcagacaggagtgaaggatggcatggcagtcaccttgcct
ctagggggcagtataaagcagggaattcgctctcgttgggtgcttctgaggtctgtgaac
cttgtctcttctgtggatggtaccccatccctgccggtgtccctatcctgggtgcgcgat
ggcatcctggtggtaggcatggattgcgagatgcaggtttatgcgcagtggaggcaggat
gaaaaaccgggcaactcagacaacaacagcatctcatctccagagggcattggaggtcgc
actatatcggtttcaaatgagggcagagcgcgatctaagagcgtcttcgagggtagtgca
ggaattgatgatgcgttccgccccccagcagtgattcaagatggcggcttgtttgaggct
gcccattcattgtcacccactcttccgcaataccatccaacccagttgctagagcttatg
gacctcggaagggtacgtcgtgctaaggccattttggcacacctggtcaagtgcattgct
ggagaagttgcagtggtgagggatgtggaagcaggtgagggtggtgccaggaggcatcta
tcccgaaccatcagcgtgactggtagcacggcaaaagacattattgttgctggccgtgat
ggtgggcgagattacaccgaaatcagctccattcccccacttccactatacgcactgctt
tctgcagaccaggacacctcttacaagatgggagaggaagtgggaaaaggggcagagcgt
gagacacaaaaacagtcagaggatcagtactctgatctgtttcaggtgcagactgtcacc
actgatgattttgtgaactttgctgcagagaaaccagagaagaagactcgtgtgattaac
ctatcacagtacggccccacgtactttggccctgaacacgcacaagtgctgtcttcacat
cttatgcactccagcctgccaggtctcacacgccttgagcagatgttcctcgtggctctt
gctgataccgtggcgactactagtgcagaagtagcaggacccacagataaacagtacact
ggtggagatgctctagatgagtgtggtctacgttacctgctggccatgaggttacatacc
tgtctgctgacatccctacccccactctacaggatgcagctactgcaccagggtgtgtcc
acatgtcactttgcatgggcgttccactcagaagctgaggaggagatgctgaacatgatt
cctgccatgcagagaggagatccacagtggtctgagctcagggcagtgggcgccggatgg
tgggtcagaaacattaacacactgaggcgaatggtggagaaggtagccaaagcagcattt
cagaggcataatgatccgctggatgcagctctgttctatctggccatgaagaagaaggct
gttctctggggtctctttaggtctcagcatgatgagaagatgacccagtttttcagccat
aacttcagtgaggaccgctggaggaaggcggctttaaagaacgccttctctctcctgggc
aaacagcgctttgaacagtcagctgcatttttcctgctcgctggctccctgaaagacgcc
attgaggtttgtctggagaaaatggaggacatccagcttgcgatgattgtcgctcgtctt
tacgaggctgattatgagagttcctccacctgtcagggtatcctgtaccagaaggttctt
ggctgcaacagagatggaagtggcttctcctgtaccaaactgcaccctgacccattcctg
aggagcattgcatactggatcatgaaggactacaccagagctctggatacactgctggag
cagatttacaaagaggatgataagaaccctgatgttctggtgaaatcttgcaatcctgtt
gtctttagtttctataactacttgcgtgcacaccctctgattattagacgacattttgcc
aagcccgaagcatctggggttgcagttggtataacatcagaacgtaactgcgcagatgaa
ataaacttgatagagcggaaactcttcttcaccaccgctaacgctcactttaaggtgggc
tgcccactcctggcccttgaggtcttatccaaaatccctaaagtcactaagaaagcatct
tctctgagtaagggctcatctgtggccaatgtcagtgccccccagccaaaggagaatggt
ggaaaggcttcagatctcgcctggggagcagagtcctctgccgggctggactggagtcaa
ccaatggttaaaatggaggatgagggtctacagttggattggggttatgataaggaagaa
gatgaagagggtgggctgaccatgaagaaaccagaggtggaggatgaggaggccaaaaag
ccatctaaatcagcagccatgcagcgtgaaggctcaaagggtgagtcagaggtggatgtg
atcgccgaacagctgaagttccgagcctgtttgaagattctcatgacggagctgcggacg
ctggcaacaggatatgaggtggatggtggcaaactgcgatttcagctctacaactggctg
gagaaggaaatcgaggccatgcactacatctgcaactataagtttgaggggaaagcggct
gcaggtcagctggagaaatggggagatgatggatctctggatctggaagactcacaaatc
cgtggtgaagcaggtgcatacgaacgtcatcagatggagcgacggcgtctgcaggccaag
cagctgcatgcagagcggaggaaatcctggctgagagagaatcaggctctgctcagagtc
ttcctcagttactgcagtctgcatggagccaagggtggaggagtgacttctgtcaggatg
gagttactctttctgctgcaggaatcacagcaagaaatgacagtgaagcagcttcaatca
ccactccccctacccaccactctgcccctgctgtcggccagcatcgcccccaccaagact
gtcatcgccaatccagtcctgcatctcagaaaccacatacatgatatcctctacaccact
gtccagatggaggctccaccacaccccgacatactggatgaccgggtgaatgctttacac
acactcgctgcttctctatcagcttgtatctaccaatctctgtgtgacagccacagctac
agtagtcagtcggagaccagtcagttcacagggatggtctatcaggggctgttactgagc
gacaggcgtagacttcgcaccgagagcatcgaggaacatgcaacgcccaccactgcccct
gcacagtggccaggtgtgtcgtctctgatcagtctgctggcgtgtgctcagggtgatgat
cagattcgtctgaacgtcatgttgtgtgaggcagtggtggctgtttatctcagtctgctg
attcatggtcttggcacacattctggaaacgagcttttccggctggctgctcatcccctc
aacaaccgcatgtgggcagccgtgtttgggggtggagccaaacttatcgtcagacccaag
cggccacctgaaatcactccagctagtctggagtcaaacaggcagacagagttccactct
gagaacaaaccagcagtacctcctccaacccctcctgctgaggacgtggaccgacagcga
cgcaggtttaacatgcgcatgcttgttcctggacgtcctgttaaagagactccagccaca
ccaccgcccatccctgtagagcggcccacctataaagagaaattcattccacctgagctc
agcatgtgggattactttgtggccaaacctttccttcctctctctgacagcggggcactg
tatgattcagatgaaagcggtggtagtgacaatgaggatgacgatgatgatgatgatgat
gccttcctctcagacacacagatgacagaacactccgatccaaactcctacagttggtct
ctgatccgccttgtgatggtcaaacttgccctgcacaatgtcaagacgttcctgcccctg
acaggactggacttcacagagttgccagtgacatctcccctggccaatgctgtgctcaag
acactggaaaactgggaacagattctccaggaaaaaatgaacaaatttgacagccctcca
ccaaactacatcaacacctaccccacggacctgagtgctggcgggggaccggctatacta
agacacaaagccatgctagaaccagataacacaccgttcaagtcaaagcaacgccactcc
ttccctgctcgccgtctgtggcattttctagtcaagcaggaggttctccaggagactttg
attcgatacatctttacaaagaaaaggaagcagagtgagtctttagatgatcatgtggac
cacctcataaaaaactacgttactggggctcaaaaaaccaacaagatggaggctgatatg
ggctacccgggaggcaaagccaaaatcatccataaagaatctgacatcatcatggcattc
gccattaacaaggctaacactaatgagttagtgctggcatctactcatgatgtccaggaa
gtggacgtgtcctcactgctcgcagctcagccttacacctggattggagaggactgtgac
aaggagtctcgcagctctgacgatgtggattatcgctcatctcacaccaatatcgcccag
gccagtgccggtccctttgccccccaacaaatggcagcatcatcctctatgccatggctg
ggcagcggacagaccagcatgggtgccagtgtgatcatgaagaggaacctgaataacgtg
aagagaatgacgtctcatcccatctatcagtactatatgacgggtgctcaggacggtagt
gtgaggatgtttgagtggaatcgtccacagcagctcatctgtttcagacaggccggaaac
gctcgagtcacacgcctctatttcaactcacagggcaacaagtgtggtgttgcagatggc
gagggctttttgagcctctggcaagtcaatcagacgtcctcaaaccccaaaccttatttg
agctggcagtgtcacagtaaaagctgcagtgatttcgccttcatcacgtcctctagtctg
atcggcacagcagggcagtccaatgatggcaggaatgtttgtttatgggacactctgatc
tctccaagtaactctatgatacacgcattccagtgccatgagaacggtgcaacggttatt
cagtatgctcctaaacagcagctaatcatcacgggcggccggaagggattcgtctgtatt
tttgacatccgtcagagacagctgctccacacattccaggcacatgattcggccatcaaa
gcactggccatggactccactgaagacttctttgtcaccggctcagccgaagggaatatg
aaggtctggaagttggcaggacacggtctcatgcactccttcagcaccgagcacgctaaa
cagtccatattccgaaacatcggcgccggcgtgatgaaaatcgaaacctgcccaggcaac
cggatcttcacctgcggagccgacgggaccctgaaaatgagggtccttcccgaccgctac
aacattccgcccagtatattccagatcctctaa
DBGET
integrated database retrieval system
