Carassius auratus (goldfish): 113062107
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Entry
113062107 CDS
T07313
Name
(RefSeq) syndecan-3-like
KO
K16337
syndecan 3
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04514
Cell adhesion molecules
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113062107
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113062107
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
caua00535
]
113062107
Proteoglycans [BR:
caua00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
113062107
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Motif
Pfam:
Syndecan
Rrn7_cyclin_N
BPD_transp_2
TGF_beta_GS
Motif
Other DBs
NCBI-GeneID:
113062107
NCBI-ProteinID:
XP_026087493
UniProt:
A0A6P6LSM9
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Position
44:2167631..2195064
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AA seq
414 aa
AA seq
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MKLLCWMALALLLAQTALAQRRKPRPSDDESSGDGLLDDEDYYSGSGSGFPDMDVRPTAA
GVTVITEETLPLSTTHSTGPAPSASPAAEPSSPPPPEVERESGLGQDVDGESISETERQE
FEEEKMTRSKEQEREQESEVGISLNKEQDGEQEQERSKATVAPRLTDVPVVFVDTSTLLG
ETTVATSDLEDIVTTEEEDDIYLTTEPIMFELSSTLGTTADDITTTEVIPTTAESTTAKP
TRPRPAPTTPSTAPVRPRRPHTTPSRAAPTESSTRSVMTTTQTQTPDETVNNEVAGPGPT
DDFEIRENEVRQGNEVGTGRGATGVAGEPDLTGNTVDAAGSSAAQLPQKNILERKEVLIA
VIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPRQATVTYQKADKQEEFYA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcctgtgctggatggcgctcgcgctgctgctggcgcagactgcactggcacag
cgtcgcaaacctcgaccaagtgatgatgagagttctggagatggacttttagacgatgag
gactactactctggatccggctctggctttccagatatggatgttagacctactgcagca
ggtgtgactgtcattacagaagagaccctcccactttctaccacacactccactggcccc
gccccctctgcctcccccgccgcagagccaagtagcccacctccacctgaggtagaacgt
gaaagtggcttgggacaagatgttgacggagaaagcatatcggagacggagaggcaggag
tttgaggaagagaaaatgacacggtcgaaggaacaggaaagagaacaggaatctgaggtc
ggaataagtttgaataaagagcaggatggagaacaggaacaagagagatcgaaagctacg
gttgccccccggctgactgatgttcctgtagtgttcgtggacacatccacccttttgggt
gagactacagtggccactagtgacctggaggacatcgtcaccacagaagaagaggacgat
atataccttactacagagcccatcatgtttgagctatccagcacactggggacaacagca
gatgacatcacaaccactgaggtcatccccaccaccgctgagtccaccactgctaagcca
accagaccacgtcctgccccgaccactccgagcactgccccggtgcgcccccggagacca
cacactaccccgagcagagccgcccccactgagagcagcactcgttcagtgatgaccaca
acacagacacaaacaccagatgaaactgtaaataatgaagttgcaggaccaggtccaact
gatgattttgaaatccgcgagaatgaagttcgccaaggcaatgaggtcgggacaggcaga
ggggcgactggcgtggcaggagaaccagatctgactggtaacacagtagatgctgctgga
agctcagccgctcaacttccacagaagaacatcctcgagaggaaggaagttttgatagcg
gtgattgtcggaggtgtagtcggagcactctttgcagcattcctcgtaatgttactcgtc
taccggatgaaaaagaaagatgaaggcagctacacattggaggagcctagacaagccacc
gtcacctaccagaaagcagacaagcaggaagaattctacgcctaa
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