Carassius auratus (goldfish): 113062226
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Entry
113062226 CDS
T07313
Name
(RefSeq) sorting nexin-27-like
KO
K17936
sorting nexin-27
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113062226
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
caua04990
]
113062226
Membrane trafficking [BR:
caua04131
]
Protein recycling
Others
Others
113062226
Domain-containing proteins not elsewhere classified [BR:
caua04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
113062226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
SNX17_FERM_C
SNX17-31_F2_FERM
PDZ_2
RBD
Motif
Other DBs
NCBI-GeneID:
113062226
NCBI-ProteinID:
XP_026087717
Ensembl:
ENSCARG00000020384
UniProt:
A0A6P6LV63
LinkDB
All DBs
Position
44:5057883..5069612
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AA seq
568 aa
AA seq
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MAEIEGDETARPASPSLLPAAASRVDGSGMVGSGSQTPTLVTSGPRVVRIVKSESGYGFN
VRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGIVKGDRILEVNRVSVEGATHKQ
VVDLIRAGERELVLTVLSVPAQEADGLDGGEESTLQPTYDYSDKQAVPISIPTYKHVEQH
SEKFVVYNVYMSGRQLCSKRYREFAILHQNLKREFSNYNFPKLPGKWPFSLSEPQLDARR
RGLEEYLERVCSVRVIGESDIMQEFLSESNENHNGITDVELRIALPDKTTASVRVRKNST
TDQVYQALVVKVGMDSIMASYFALFEVINQSFVRKLAPNEFPHKLYVQNYTSAVPGTCLT
MRKWLFSTQEEELLQDNPLALHYCFHQAQDDVKKGFIKAEDKAYQLQKLAEQRKMTTYLS
LLRSCEGYNEMMFPHCACDSRRKGHVITAISMKHFKLHACTEDGTLENQVIMFEWSEMQR
WDTDEEGMAFCFEYVRGEKKPRWVKIFTPYFNYMHECFERIFCELKWKKEVEDEASDKGN
KNCSNNDYLSPLEQQKGWRHLGDEIATS
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaatcgaaggagatgagactgctcggcccgcttctccgtcactgctacccgca
gcagcgtcccgcgttgacggatcggggatggtcggttctggaagccagaccccgaccctg
gtgacttcgggtccgcgcgtggttcggatagtaaagtcggaatcgggatacggattcaac
gtccgcggtcaagtgagcgaaggcggccagctgcggagcattaacggggagctgtacgct
cctctccagcatgttagcgccgtgctccccgggggtgcggcggaccgggccggtatagtg
aaaggagaccgaatactagaagttaaccgggtgagcgtggagggggcgactcataagcag
gtggtggatctgatcagggctggcgagagggagctggtgttgaccgtgctctctgtgccg
gcacaggaagcggacggacttgatggcggcgaggaaagcactttgcagcccacttacgac
tacagcgacaagcaggctgtccccatttcaatccccacatacaaacatgtggaacagcac
tcagagaagtttgtggtgtataacgtgtacatgtcgggcagacagctgtgctcgaagcgt
taccgggagttcgcaatacttcatcagaacctgaagagagagttctccaactacaatttc
ccaaagctgccagggaaatggcccttttctctgtctgaaccacagctggatgctcgcagg
agaggcttggaggaatacctggagagagtgtgctcagtgcgggtcatcggtgagagtgac
atcatgcaagaattcctgtctgaatcaaatgagaaccacaacgggataactgatgtggag
ctccggatagcgctgcctgataaaaccacagcctcagtgagagtccgaaagaatagcacc
actgaccaggtttaccaggctcttgtcgtgaaggttggaatggacagcatcatggccagt
tactttgctctctttgaagttattaaccaatcgtttgtgcgcaaattggctcctaatgag
ttcccgcacaagctgtatgttcagaactacacatcagctgtccccgggacgtgtctcacg
atgcggaagtggctcttcagcacacaggaagaggaactgctgcaggacaaccctctcgct
ctgcactactgcttccatcaggcacaggatgatgtgaagaagggattcattaaagcggag
gataaggcataccagctgcaaaaactagcagaacagaggaaaatgacaacgtatctgagt
cttttgcgctcatgtgagggatataacgagatgatgttccctcactgtgcatgtgactca
cgaaggaaaggtcatgtgatcacagccatcagcatgaagcatttcaaactgcacgcgtgc
acagaggacggcactcttgagaatcaggtgatcatgttcgaatggtcagagatgcaaaga
tgggacacagatgaagagggtatggccttctgctttgaatatgtgcgcggagaaaagaaa
cctcgctgggtcaaaatattcactccttattttaactacatgcacgaatgctttgagagg
attttctgtgagcttaaatggaagaaagaggttgaagacgaggcttcagacaaaggcaat
aagaactgtagtaataatgattacctctcgccgctggagcaacagaagggatggcgccac
ctaggggacgagattgccacttcctaa
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