KEGG   Carassius auratus (goldfish): 113062249
Entry
113062249         CDS       T07313                                 
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    113062249 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:caua03400]
    113062249 (aptx)
Enzymes [BR:caua01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     113062249 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     113062249 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     113062249 (aptx)
DNA repair and recombination proteins [BR:caua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     113062249 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     113062249 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA DUF6480 zf-C2H2_6
Other DBs
NCBI-GeneID: 113062249
NCBI-ProteinID: XP_026087793
Ensembl: ENSCARG00000003944
UniProt: A0A6P6LTI9
LinkDB
Position
1:9570536..9574941
AA seq 347 aa
MPVCLLVSEDDSHKPIQLHHQQSVTLGRGPETKIKDKKCSREQVELRADCSRGFITVKQL
GVNPTSVDDVVVGKGNQVTIKPGQRLYMVNQQYPYRVKFTEDTSTPRSTGDLSKPSKRPH
QMSSEGNGEKIRSPANTSSTPRTDQHRMSDGSPPPKQTPPAESDKSGSAGHWSQGLKVSM
QDPKMQVYKDDQVVVIKDKYPKARYHWLVLPWDSISSLKALRSEHMELLKHMQRVGDQMV
QQCPDAHKLSFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFVESQDVIA
MLEHDGKVTVKEGTNELLKLPLRCHLCHKEQPTIPKLKEHLKTHLPS
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgcctgtgtgtttgctggtaagtgaagatgattcacataaacccattcagctacatcac
caacagtccgtgactctgggtcgaggaccagaaaccaagatcaaagacaaaaagtgctca
agagaacaagttgagttgagagctgattgcagcagaggatttatcactgttaaacagttg
ggtgtgaatcctacaagtgtggacgatgtggttgtgggcaaaggcaatcaggtgaccata
aagccgggccagagactttacatggtcaatcagcagtatccttacagagtaaagttcact
gaggacacgtccacccccagatctactggagacttgagcaaaccttcaaagagaccccat
cagatgagctctgaggggaacggagagaagatcaggagccctgcaaacacatcatcaaca
ccccggacagaccagcacagaatgtcagacggttcacctcctccaaaacagacaccgcca
gctgaatcagataaatcaggatcggctggccattggagccaagggcttaaagtatccatg
caggaccctaagatgcaggtgtacaaagatgatcaggttgtggtcatcaaggacaagtac
ccaaaggcgcgctaccattggctggtgctgccctgggactcgatctccagtctgaaggct
ctgcgctcggagcacatggagctgctcaaacacatgcagcgtgtgggagaccagatggtg
cagcagtgccctgacgctcacaaactgagcttccgtctgggatatcacgccatccccagc
atgagtcacgtccacctgcatgtaatcagccaggactttgactcgccgtgtttgaagaac
aagaaacactggaattccttcaccactgactactttgtagagtctcaagatgtcattgcg
atgctggagcatgatgggaaagtgacggtgaaagaaggcactaatgaattgctgaagctg
cctctgcgctgtcacttgtgtcataaagagcagccgacgatacctaaactaaaagaacat
ctcaaaactcacctgccctcttaa

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