KEGG   Carassius auratus (goldfish): 113062351
Entry
113062351         CDS       T07313                                 
Name
(RefSeq) mRNA-decapping enzyme 1B-like
  KO
K12611  mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113062351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caua03019]
    113062351
Messenger RNA biogenesis [BR:caua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     113062351
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     113062351
SSDB
Motif
Pfam: DCP1 mRNA_decap_C WH1
Other DBs
NCBI-GeneID: 113062351
NCBI-ProteinID: XP_026087939
Ensembl: ENSCARG00000019092
UniProt: A0A6P6LTV4
LinkDB
Position
4:21439187..21447865
AA seq 499 aa
MTASTGGGGSCLSMSLSALKRLDPYISSITDLASQVALYTFNNTTNEWEKTNVEGTLFVY
NRFASPRHGFTILNRLSMDNLTEPITKDLDFQLQHPFLLYRNARLSIYGIWFYDNKDCQR
IAELMKKLAGQEQQLQPLMAVGSVSPRSAEQGVDIMQMLTKARDDYDKGKLSEPKEIGSG
GIIYGNPHLIKPIPLKPAQETHIQGQMQQNTEMDTKQLSVVNLFGAQSKPDSVSPQPTST
VSRVGPARPAVARSLSYDDPSPAGGTVVSNTPMQHCPAIHKLMSGSLLQPLSESPESRLC
ENGAVQNQPDPIQKLLMNPLPVAGTPGMPSLQLNQGESGVGPQIHPKAKASGPVPTQHLL
YVPNKAPPAGVAGNVVSPHELLQRLTLVQQEQELLPHQELLQPSLTTSSSNLSKTNSTQV
SSPQRIPATVAPTLLLSPSVFTQTKTTRAEPEPVEIRALSRTQLQATLLHLIKNDASFLD
TIYEAYVSRLATDFSSKPF
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgactgcaagcacaggtggcggcgggagctgtttatccatgagtctgtctgccctaaag
agactcgacccctacatcagcagcatcacagacctggccagccaagtagcactttacacc
ttcaacaacaccactaatgaatgggaaaagacaaatgtggagggaactctgtttgtctat
aacaggtttgcctcccccaggcacggcttcaccatcctgaatcgtttgagcatggacaac
ctgaccgaacccatcactaaagacttagatttccagctgcagcatccatttctcctgtac
aggaacgctcgcttgtccatctatggcatctggttctacgataacaaagactgtcagcgt
atagcagagctcatgaagaagttggcagggcaggaacagcagttacagccgctaatggca
gttggctctgtctctccgcgatctgcagagcagggtgtggatataatgcagatgctcact
aaagcacgagatgactatgacaagggaaaactcagtgagccgaaagaaattggcagtggt
ggcatcatctatggaaacccccatctgatcaaacccattcccctcaaaccagcacaagag
acacacattcagggacaaatgcagcagaacacagagatggacacaaagcaactctcggtt
gtcaatttgttcggtgctcagtcaaaaccagactccgtctcgccacaacccacctcaact
gtcagtagggtgggtccagcgcgtcccgcggtggcccgttcgctgtcatatgatgaccct
tctcccgcaggtggcactgtggtgtccaacacccccatgcagcactgcccagccatccac
aagctcatgtctggttcactgctgcagcctctctctgaatccccagagagccgcctgtgt
gaaaacggggccgtccagaaccagcctgacccgatacaaaaactgctaatgaacccgctc
cctgtggcagggactccagggatgccttccttacagttaaatcagggagaaagtggggtg
gggccccaaatccaccctaaggctaaagcctcagggccagtcccaactcagcacttgctc
tatgtcccaaataaagcaccccctgctggagtggcagggaacgtggtgtcgccacatgag
cttctgcagaggctcacattggtgcagcaggagcaagagctcctccctcatcaggagctt
ctacagcccagtctcaccaccagcagctccaatctcagcaaaacgaattctacacaggtg
agctcacctcagcgcatcccagcgactgtagcccccaccctgcttctgtcacccagtgtg
ttcacccagactaaaaccacaagagcagaaccagaaccagttgagatcagagctcttagc
aggactcagctacaggccacgctgctccacctcatcaagaatgatgcctcattcctggac
accatctatgaagcatatgtctcccgtcttgctacagacttcagctcaaaacctttctga

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