Carassius auratus (goldfish): 113062351
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Entry
113062351 CDS
T07313
Name
(RefSeq) mRNA-decapping enzyme 1B-like
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113062351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113062351
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113062351
mRNA degradation factors
5'-3' decay
Decapping complex
113062351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
113062351
NCBI-ProteinID:
XP_026087939
Ensembl:
ENSCARG00000019092
UniProt:
A0A6P6LTV4
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All DBs
Position
4:21439187..21447865
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AA seq
499 aa
AA seq
DB search
MTASTGGGGSCLSMSLSALKRLDPYISSITDLASQVALYTFNNTTNEWEKTNVEGTLFVY
NRFASPRHGFTILNRLSMDNLTEPITKDLDFQLQHPFLLYRNARLSIYGIWFYDNKDCQR
IAELMKKLAGQEQQLQPLMAVGSVSPRSAEQGVDIMQMLTKARDDYDKGKLSEPKEIGSG
GIIYGNPHLIKPIPLKPAQETHIQGQMQQNTEMDTKQLSVVNLFGAQSKPDSVSPQPTST
VSRVGPARPAVARSLSYDDPSPAGGTVVSNTPMQHCPAIHKLMSGSLLQPLSESPESRLC
ENGAVQNQPDPIQKLLMNPLPVAGTPGMPSLQLNQGESGVGPQIHPKAKASGPVPTQHLL
YVPNKAPPAGVAGNVVSPHELLQRLTLVQQEQELLPHQELLQPSLTTSSSNLSKTNSTQV
SSPQRIPATVAPTLLLSPSVFTQTKTTRAEPEPVEIRALSRTQLQATLLHLIKNDASFLD
TIYEAYVSRLATDFSSKPF
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaagcacaggtggcggcgggagctgtttatccatgagtctgtctgccctaaag
agactcgacccctacatcagcagcatcacagacctggccagccaagtagcactttacacc
ttcaacaacaccactaatgaatgggaaaagacaaatgtggagggaactctgtttgtctat
aacaggtttgcctcccccaggcacggcttcaccatcctgaatcgtttgagcatggacaac
ctgaccgaacccatcactaaagacttagatttccagctgcagcatccatttctcctgtac
aggaacgctcgcttgtccatctatggcatctggttctacgataacaaagactgtcagcgt
atagcagagctcatgaagaagttggcagggcaggaacagcagttacagccgctaatggca
gttggctctgtctctccgcgatctgcagagcagggtgtggatataatgcagatgctcact
aaagcacgagatgactatgacaagggaaaactcagtgagccgaaagaaattggcagtggt
ggcatcatctatggaaacccccatctgatcaaacccattcccctcaaaccagcacaagag
acacacattcagggacaaatgcagcagaacacagagatggacacaaagcaactctcggtt
gtcaatttgttcggtgctcagtcaaaaccagactccgtctcgccacaacccacctcaact
gtcagtagggtgggtccagcgcgtcccgcggtggcccgttcgctgtcatatgatgaccct
tctcccgcaggtggcactgtggtgtccaacacccccatgcagcactgcccagccatccac
aagctcatgtctggttcactgctgcagcctctctctgaatccccagagagccgcctgtgt
gaaaacggggccgtccagaaccagcctgacccgatacaaaaactgctaatgaacccgctc
cctgtggcagggactccagggatgccttccttacagttaaatcagggagaaagtggggtg
gggccccaaatccaccctaaggctaaagcctcagggccagtcccaactcagcacttgctc
tatgtcccaaataaagcaccccctgctggagtggcagggaacgtggtgtcgccacatgag
cttctgcagaggctcacattggtgcagcaggagcaagagctcctccctcatcaggagctt
ctacagcccagtctcaccaccagcagctccaatctcagcaaaacgaattctacacaggtg
agctcacctcagcgcatcccagcgactgtagcccccaccctgcttctgtcacccagtgtg
ttcacccagactaaaaccacaagagcagaaccagaaccagttgagatcagagctcttagc
aggactcagctacaggccacgctgctccacctcatcaagaatgatgcctcattcctggac
accatctatgaagcatatgtctcccgtcttgctacagacttcagctcaaaacctttctga
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