Carassius auratus (goldfish): 113062362
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Entry
113062362 CDS
T07313
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua02010
ABC transporters
caua04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113062362
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113062362
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caua02000
]
113062362
Transporters [BR:
caua02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
113062362
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
113062362
NCBI-ProteinID:
XP_026087996
Ensembl:
ENSCARG00000004934
UniProt:
A0A6P6LWY6
LinkDB
All DBs
Position
1:complement(9586237..9619649)
Genome browser
AA seq
2269 aa
AA seq
DB search
MAVSTQLGLLLWKNFTSRRRQTVQLLIEIIWPLFIFFILISVRFHYPPHEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGETPGVVGNFNDSIISRLFIDAKKILLYSQHDK
SFEGFKVLVRALRKLQRNTEGFKLKDFLHDNETLSAFLEKNATLPKHAVRQIVEANVNLE
KVLINGFGVHLRDLCNTTSLEDFVTIADKDVSQLTQNIICQSSAEWLNNAESHFLSNLDF
LKPIRKDVKSDPKIIQDVSIATDSLLESLGALAVELVSMKSWRDMRNEIQYLTGNSTQSP
KHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNYGNDSDSEPVSVYDNSSTPYC
NSMMKGLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIQEVNKTFQEFGVLRDLGGM
WEEMRPKIWDFMENSEEMDLVRTLLQNNASARFFNAKLSGTDWRVEDVSSFLSKSPEDTR
PHGSAYTWREVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMRLLDDRKFWAGI
VFPDMQANTSDLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYL
QDVIEHGIIRALTGSKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIII
KGVVYEKEARLKETMRIMGLDNGTLWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPG
VVYLFLASFAVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYIGFGAK
VVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPMQEDSYSLTTSISLMLFDSVLYA
LMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKCGGISSMPTNKKENAEAVCIEEEPAHL
EPGVYIENLVKVYSNGKLAVDDLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIQGKDIRTNLNTIRQNLGMCPQHNVLFSMLTVEEHIWFYARLKGLSEEKVKSEMEQIV
MDLGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLK
YRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKDFDL
SASSCRTSSSTVSYSKGSLKKEDSVSESSSDAGLGSDHESETATIDVSLISNVIFKHVPT
ARLVEDLGHEITYVLPYESAKDGAFVELFHEIDDRLTDLGISSYGISDTTLEEIFLKVAE
DNGVDVEISDGIIPARRNRRHAFGDHQSCLKPFTEDDFDLNDSEGDPESRETDWLGGADG
KGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALGFSLIVPPFGK
YPSLALEPSMYGEQFSFVSNDAPEDRHTNKLLEALMDNPAYSEQCKDEQNTGSSKSCAVK
DGEWMVPEVPESVRDIFLKGNWSMENPSPVCECSCEERKKMLPECPPGAGGLPPPQIKVT
VNETLQNLTGKNISDYLVKTYAQIIGKSLKNKLWVNEFRYGGFSLGARSSQALPPGDEIT
DAISHIRKRFSLQAGTAADRFLASLSIFIRGLDTKNNVKIWFNNKGWHSIGGFLNVMNNA
VLRANVPPGLDRSKFGIKAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASF
VVFLIQERVNKAKHMQFISGVQPLLYWLANFVWDMCNYIVPATLVIIIFVCFQQEAYVSS
TNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFG
SNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMAEALERFGENRFRSPLAWDMVGKN
LFAMALEGAIFFCITVLIQYRFCIKARPFSTKLTAIGEEDEDVARERQRILSGGGHTDIL
ELKQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSVVTSGEAYL
AGKSVLTEIDEVHQNMGYCPQFDAISDLLTGREHLEFYAILRGIPEKEVCEVADWGIRKL
GLMKYVDKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKARRALWNCILSIIK
EGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNKFGDGYTIILRVAGADPQL
EPVMEFIEKELPGSTLKEKHRNMLQYQLPSSLTSLARIFNILSKNKEQLHIEDYSISQTT
LDQVFFNFAKDQSDEDHLKDIAINKNDAVVDISHLNTFLVDEKAKETVV
NT seq
6810 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctccactcagttgggtttgctgctgtggaagaacttcacttcccgacggaga
cagactgttcagctgctgatcgagatcatatggccacttttcatctttttcatcttgata
tctgtcagattccactatcctccacacgagcaacatgaatgccactttcccaataaagcc
atgccctctgcagggactttaccttgggtacagggtatcatctgcaacgccaacaaccct
tgctttcgctaccccacgcctggagagacccccggggtggtgggcaacttcaatgactcc
atcatctcccgactgttcatcgatgccaagaaaattctcctctacagccaacatgacaag
agcttcgaaggtttcaaagtactcgtccgggccttgcgaaaactgcagagaaacactgaa
gggttcaagctgaaggacttcctccatgataatgaaacgctgtctgcgtttcttgagaaa
aacgctaccctgcccaagcatgctgtgagacagatagtggaggctaacgtcaacttggag
aaggtgcttattaatggctttggcgttcatctcagagacctgtgcaataccacctctctg
gaggattttgtgaccattgcagataaggatgtgtctcagctgacgcaaaacatcatctgt
caatcgtctgctgaatggctgaacaatgcagagagccacttcctgtccaacttggacttc
ctgaagccaatacggaaggatgtcaagtccgacccaaagattatccaagatgtgtccata
gcaacagacagtctcctggagagtttgggagcattagcggtggagcttgtgagtatgaag
agctggcgggacatgcgcaacgagatccagtacctgacgggcaacagcacgcagtccccc
aagcacatgtatcaggccgtgtcccgcatcgtctgcggtcacccggagggcggaggcctg
aagatcaagtccctcaactggtacgaggacaacaactacaaggccctgttcgggaactac
ggcaatgacagcgacagcgagcccgtctccgtctacgacaactcctccacgccctactgc
aacagcatgatgaagggcctggagtcgagtcccatatcccgcatgatctggagggctctg
aagccgctgctcatggggaagatcctgtacaccccagacacccctgccacccagaggatc
atacaagaggttaataagacgtttcaggagttcggcgtgcttagggatctcggcggcatg
tgggaagagatgagacctaaaatctgggactttatggagaacagtgaggagatggacctc
gttcggacccttctccagaacaatgccagtgctcgcttctttaacgccaagctgagcggg
acagactggcgtgtggaggatgtgtccagctttctgtccaagtctccagaggacacgcgt
ccccatgggtcagcgtacacatggagggaagtgttcaatgagacggatcaggccatccaa
accatctctcggttcatggagtgtgtgaacttggataagttggagcctgtggctaatgag
gagcgactggttaacaagtccatgcgtctgctggatgaccgcaagttttgggctgggata
gtgtttcctgacatgcaggccaacacgtctgacctgccgcctaacgtcaactacaagatc
cgcatggacattgataatgtggagcgcaccaacaagatcaaggatgggtactgggatccc
ggtcctcgagcggacccgtttgaagacctgcgctatatttggggtggattctcctacctg
caggacgtgattgaacacgggatcatacgagctctgaccggcagcaaggagaaaaccgga
gtttacatccagcagatgccttatccctgctatgtggacgacattttcctgcgggtaatg
agccgctccatgcctctgttcatgactctggcctggatgtactcggtggccatcatcatt
aagggtgtggtgtacgagaaggaagcccggctcaaggagactatgaggattatgggtctg
gataatggcaccttgtggctgagctggttcatcagtagtctgatcccactgctcatcagc
gccgccctgctggtgctcatcctgaagatggggaatctcttgccgtacagtgatcctggt
gtagtctacttgttcctggcctcgtttgcggtggtgaccatcatgcagtgtttcttgatc
agcacgctcttctcccgcgctaacctcgccgcggcctgcgggggcatcatatatttcacc
ctctatcttccctatgtgctgtgcgtggcctggcaggattacatcggctttggcgccaaa
gtagtagtgagcctcttgtctccggtggcgttcggcttcggctgcgagtactttgctctg
ttcgaggagcagggagtgggcatccagtggagtaacctgctgtccagccccatgcaggag
gacagctacagtctcaccacatccatctcgctcatgctcttcgattctgtactgtacgcc
ctcatgacctggtacattgaagctgtgtttccaggtcaatatggcatcccacgaccctgg
tatttccctttcaccaagtcatactggtgcggagagaaatgtggggggatttcatcaatg
ccgaccaacaagaaagaaaatgctgaagctgtatgcattgaagaagaaccagcccatctg
gaaccaggtgtttacatcgagaacctggtgaaggtttacagcaacggcaaactagcggtg
gacgatttgacgctgggtttttatgagggtcagatcacctccttcctggggcacaacggt
gctgggaaaaccacaaccatgtctatcctcactggcctgtttcctcccacctcgggcacc
gcttacatccagggcaaagacatccgcaccaatctgaacactattcgtcaaaacctgggc
atgtgtccgcagcacaacgtcctgtttagcatgctcaccgtggaggagcacatctggttt
tacgcacgtctgaagggtttgtctgaggagaaggtgaaatcagagatggagcagatcgtg
atggacctcggcctgcctcataaacgcaaatctcgaaccagccagctctcaggaggaatg
cagaggaagttatcagtagcgctggcgtttgttggagggtcaaaggtcgtgatcctggat
gagcccacagctggagtcgatccttacgctcgccggggaatctgggacctactgctgaag
tatcgtcagggacgcaccatcatcctctccacccaccacatggatgaagctgatatcctg
ggcgatcgcattgctatcatctcccacgggaagctgtgctgtgtgggctcctctctgttc
ctcaagacccagctggggacgggatactacctgacgctggtgaagaaggacttcgatctc
tcggccagctcctgccgcacctccagcagcaccgtctcctactccaaaggaagtctcaag
aaggaggacagtgtatccgagagcagttctgatgctggattgggcagcgaccatgaaagc
gaaaccgccaccatagatgtctccctgatctccaatgtgattttcaagcacgttcctaca
gccagactggttgaagacctcgggcacgagatcacttacgttctgccttacgagtcggcc
aaagacggagcgtttgtggagctcttccatgagatcgacgaccgcctcactgacctcggc
atttctagctacggcatctctgacacaaccctggaggagattttcctcaaggtggcagag
gacaatggtgttgatgtggagatatcagatgggattatacccgcacgcaggaaccgcaga
catgctttcggtgaccatcagagctgcctgaagcctttcactgaagacgactttgacctc
aatgactctgaaggtgatccagaatctcgtgagacggactggctgggcggcgctgatggg
aaaggctcgtaccaggtgaagggctggagtctgaagagacagcagtttgtagctctgctc
tggaaacgcttcctgtacgcccgacgctcccggaaaggtttctttgctcagattgtgctt
cccgctgtgttcgtgtgcatcgctctggggttcagtctcattgtccctccattcggaaag
tatcccagtctcgctctggagcccagcatgtatggggagcagttctccttcgtcagcaat
gatgcgcctgaagacagacacacaaacaagttactcgaagctctgatggacaatccggct
tacagcgaacaatgcaaagatgagcaaaacactggcagtagcaaatcatgcgcggttaaa
gatggagagtggatggttccagaggttcctgagagcgttcgggacatattcctaaaaggg
aactggagtatggaaaacccatcgcctgtgtgtgagtgcagttgtgaagaaaggaaaaag
atgcttccggagtgtcctccaggagcaggtggtctgccacctcctcagatcaaagtcacc
gttaatgaaaccttgcagaatctgacaggcaaaaacatttcagactacttggtcaaaacc
tatgcacagattattgggaaaagcttgaagaacaagctctgggtcaacgaattcaggtat
ggtggattctcattgggtgcgagaagttcacaggccctcccccctggtgatgagatcacc
gatgccatctctcacattcgtaaacgcttcagtcttcaagcgggaaccgcagctgaccgc
tttctggccagcctgtcgatttttatccggggtctcgataccaagaacaacgtgaagatc
tggttcaataataagggctggcacagtatcggagggttcctcaatgtcatgaacaatgcc
gtcctgcgtgctaatgtgccccccggcctggatcggtccaaattcggcatcaaagcgttc
aaccatccgctcaacctcaccaaagagcagctctcacaggtggcactaatgacgacctca
gtcgacgtgctggtgtccatctgcgtcatcttcgccatgtcctttgtcccggccagcttt
gtggtgttcctcatccaggagagagtgaataaagccaaacacatgcagttcatcagtgga
gtgcagcccttactctactggctggccaactttgtgtgggacatgtgcaactacattgtc
ccagcgaccctggtcatcatcatcttcgtctgtttccagcaagaggcctacgtgtcctcc
accaatcttcctgttctcgccctcctgctgttgctctatgggtggtccataacacccctg
atgtacccagcatcattcttctttaagattcccagtacagcgtatgtggttttgaccagc
gtgaacatcctcattggaataaatggtagcgtgtccacatttgtcctggagcttttcggc
agcaacgagattggtggcatcaacgacatcttgaagaacgtgttcctgatcttccctcac
ttctgtctgggcagaggactcattgacatggtgaagaaccaagctatggctgaagctctg
gagagatttggtgagaaccgattccgctctcctctggcgtgggacatggtgggcaagaat
ctctttgccatggccttagagggtgcgatattcttctgcatcaccgtccttatccagtac
cgtttctgcatcaaggccaggccgttcagcactaagctgacagcgatcggagaggaggac
gaggatgtggccagagagagacagaggatcttaagcggaggaggacacactgatatcttg
gagctcaaacagctcaccaaggtttataagcgaaagcagaagccagctgtagacagactg
tgtgtgggcatcccaccgggagagtgttttgggctgctcggcgtgaacggagctggaaag
acaagcaccttcaaaatgctgacaggagattctgttgtcactagcggagaggcctacttg
gcaggaaagagcgtgctgacggagatcgatgaagtgcatcagaatatgggctactgtccg
cagtttgacgccatcagtgatctgctgactggtcgagaacatctggagttttacgccatt
ctgcggggcatcccagagaaggaagtgtgcgaggtggcagattggggcattcgtaaacta
ggcctgatgaagtacgtagacaaagcagcaggaagctacagcgggggaaacatgaggaag
ctctccaccgctatggcactcatcggaggaccgccagtggtgttcttggacgaacccacc
actgggatggaccccaaagcccggcgggccctgtggaactgcatcctcagcatcattaaa
gagggacgctcggtcgtcctgacctcacacagtatggaggagtgtgaggcgctctgcact
cgtatggccatcatggtgaacggcaggttccgctgtctgggcagtgtgcagcacttaaag
aacaagttcggtgacgggtacaccatcatcctgcgggtggcgggggctgatccgcagctg
gagccggtgatggagttcatcgagaaggagctgccgggcagcacgctgaaggagaagcac
aggaacatgctgcagtaccagctgccctcgtcgctgacatccctcgcccgcatcttcaac
atcctctccaagaacaaagagcagctccacatcgaggactactccatctcacagaccact
ttagaccaagtatttttcaattttgccaaggaccaaagtgacgaggaccacttaaaagac
attgccattaataaaaatgatgccgttgtggacatttctcacctgaacaccttcctcgta
gacgagaaggccaaagagacggtggtgtga
DBGET
integrated database retrieval system
