Carassius auratus (goldfish): 113062401
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Entry
113062401 CDS
T07313
Name
(RefSeq) ribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113062401
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
113062401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
113062401
NCBI-ProteinID:
XP_026088014
Ensembl:
ENSCARG00000027812
UniProt:
A0A6P6LU30
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All DBs
Position
44:9091208..9099870
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AA seq
635 aa
AA seq
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MSAEISTIPSLHLYLDSFWSSSVGSHSSDINATNAWVTAPTSLYNAPVSSSVRMDPAQSS
PTPDESSELSSEFQTQLDLFLKLGFSQTQVRAAFLKLGLNADTNRVLGELIQAAGESEER
EEPTASPVLVSRGDASSKVRSTRNAPAVSSTSEELVEDEDALKPIVIDGSNVAMSHGNKE
VFSCLGIQLAVNFFLERGHVDITVFVPSWRKEQPRADVPITDQHILRELERRKLLVFTPS
RRVAGKRVVCYDDRFIVKLAYESDGIIVSNDTYRDLQGERPEWKRFIEERLLMYSFVNDK
FMPPDDPLGRYGPTLDNFLRKTPRIPKKQPCPYGKKCTYGIKCKFHHPERTKQSQRALAD
ELRDKAKISSTPHKPQPVSSQSPSLEEVMEQKLSLDAGSLKKCHASENVLDIKAAPQPTQ
RKFPLKKERRHSPTNLDSFPNGSQERLDSGLGSYECHSSETSHCDHRKSKPSNSGRHRYV
LANSQPCSCCSYQSLSTSGASQQHSMGLPSSPNPTYAQPQYHSYGGGPVYPPVNLSQYSF
PHSRGPPPQQGYWSDHYGGYPPASHTPMQPERGHGHWTPSNHSPQWSEREQVRKKLLAIF
NVRLVDRAMDRFPFLLDPQRLAAEILTLQSQDGAF
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgaaatcagcaccatcccctcgttacacttgtatttggattccttttggtca
tccagtgtagggtcccacagctctgacataaacgccaccaacgcatgggtaacagcaccc
acatctttgtacaacgcacccgtttccagcagcgttagaatggacccggcccagtccagt
ccgactccagatgagtcctccgaactaagttctgagtttcagacccagctcgacctgttc
ctcaagctggggttttctcaaacgcaggtccgtgccgctttccttaaactcggcctcaac
gcagacaccaacagggttttgggtgagctgatacaggctgctggggaatcagaagagaga
gaggaaccgacagcttccccggtgctggtttcacgtggggatgcttcctctaaggttcga
agcacccggaatgctccggcagtgtcaagcacttcagaagagctggtagaggacgaggat
gcactcaaaccaatagttattgatgggtctaacgtagccatgagccacgggaacaaggaa
gttttttcctgtctgggaattcagttggcagtgaacttcttcctggagcgaggtcacgtc
gacatcacggtgtttgtgccttcctggagaaaagagcagccgcgagctgatgtacccatt
acagatcagcacattctgcgtgagttagagcggaggaagctcttggtgttcacgccatcc
agaagagtggcaggaaaacgtgtggtttgctacgatgaccgttttattgtgaagctggcg
tacgaatctgatggcattattgtatccaatgacacttaccgagatctgcaaggagaacgt
cccgagtggaagcgttttatagaggagaggcttctaatgtattcgttcgtcaatgacaag
tttatgcctccggatgaccctttgggaagatatggacccaccctagacaactttctcagg
aagactccacgtattccaaagaaacagccctgtccttatggaaagaagtgcacttatgga
atcaagtgcaagtttcatcatccagagcgaaccaagcaatcccagcgtgccctggccgat
gaactccgagacaaagccaaaatttcatccacaccgcacaaacctcaaccagtttccagt
cagagtccgtctctggaggaagtcatggaacagaaactgtccctggacgctggctctctc
aagaagtgtcacgccagtgaaaatgtccttgacattaaagcagccccccagccaactcaa
agaaagtttcctttgaagaaagaacgacgtcattcgccaacaaatctagattcctttccc
aatggatctcaggagcgtttggattctggcttgggttcctacgaatgccattcttctgaa
acttcccattgtgaccacaggaagtccaaaccatccaacagtgggcggcatcgttacgtt
ctggccaatagccaaccctgcagttgctgttcctaccaatccttaagcaccagtggagcc
agtcaacaacatagcatgggcctgcccagctcaccaaacccaacttatgctcaaccccag
tatcactcctatggaggaggtccagtttacccacctgttaacttgtcccagtattcattt
ccacacagcagagggcctcctccccaacagggctactggtctgaccattacggtggatat
cctccagcgtcccacactcccatgcagccagagagaggacatggacactggacgccttcc
aatcacagtcctcagtggtccgaacgggagcaagtgaggaagaaattacttgcaattttc
aatgtacgtttggtggaccgagccatggacagattcccatttctcctggacccacaaaga
ctggccgcagagattttgacccttcagtctcaggatggggctttttaa
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