KEGG   Carassius auratus (goldfish): 113062432
Entry
113062432         CDS       T07313                                 
Name
(RefSeq) syntaxin-1B
  KO
K08486  syntaxin 1B/2/3
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    113062432
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:caua04131]
    113062432
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:caua04147]
    113062432
Membrane trafficking [BR:caua04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    113062432
Exosome [BR:caua04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   113062432
  Exosomal proteins of other body fluids (saliva and urine)
   113062432
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 AAA_13 Lzipper-MIP1 Spectrin_Anc-1 Relaxase_C GNVR Baculo_PEP_C DUF4658 ARM_ECM29 TolA_bind_tri VBS_C3G9 CAP_N
Other DBs
NCBI-GeneID: 113062432
NCBI-ProteinID: XP_026088060
Ensembl: ENSCARG00000040639
UniProt: A0A6P6RH79
LinkDB
Position
44:9786684..9825413
AA seq 288 aa
MKDRTQELRSAKDSDDDEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQMTKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DYVERAVSDTKKAVKYQSQARKKKIMIIICCVILGVVLASTIGGTLGF
NT seq 867 nt   +upstreamnt  +downstreamnt
atgaaggatcgcacgcaggaactacgaagtgctaaggacagtgacgatgatgaggaagtc
gttcatgtcgaccgagaccactttatggatgaatttttcgaacaggtggaggagatccgt
ggctgtattgaaaagctgtcagaagatgtagaacaggtcaagaagcagcacagtgccatc
ctagcagcacccaaccctgatgaaaagaccaagcaggagttggaggacctcacagctgac
attaagaaaacagccaataaagtgcgctctaaattaaaagcaatcgaacaaagtatcgag
caagaggaggggttgaacagatcatctgcagatttgcggatccgcaagacacagcattcc
acgctgtcacgcaagtttgtagaggtgatgacagagtacaacaccacgcagtccaaatac
agagaccgctgcaaggaccgtattcagagacaactggaaattactggcagaacgactacc
aatgaggagctggaagacatgttggaaagtgggaagcttgccatcttcactgatgatatc
aaaatggactcccagatgaccaagcaggctctaaatgagattgagacccgacacactgag
atcattaagttggagaacagcatccgtgagctgcacgacatgtttgtggacatggcaatg
cttgtggagagtcagggagagatgattgacagaattgagtataatgtggaacactctgtg
gactatgtagagagagcagtttctgacaccaagaaggctgtcaaataccagagtcaggca
cgcaagaagaagatcatgatcatcatctgctgtgtaattttgggagtggttttggcgtcc
actatcggaggaaccctgggcttctaa

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