Carassius auratus (goldfish): 113062608
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Entry
113062608 CDS
T07313
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03320
PPAR signaling pathway
caua04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
113062608
03320 PPAR signaling pathway
113062608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113062608
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
caua03310
]
113062608
Transcription factors [BR:
caua03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
113062608
Nuclear receptors [BR:
caua03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
113062608
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
C1_2
Motif
Other DBs
NCBI-GeneID:
113062608
NCBI-ProteinID:
XP_026088359
Ensembl:
ENSCARG00000035079
UniProt:
A0A6P6LV21
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Position
44:complement(14079406..14101135)
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AA seq
480 aa
AA seq
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MGDSRDSRSPDSSSVSSPPSGQRSPPLAPSAAAMTSLPPMTSAVNSPISSMGSPFSVISS
SLGSPCLPGTPSVGYGPISSPQMNMFARNTEINSTVSMSGLHAVSSSDDVKPPFGLKPMS
AHSPGPMVSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDK
RQRNRCQYCRYQKCLAMGMKREVVQDERQRSVQEERQRNKEREGEVESTSAANEEMPVEK
ILEAEMAVEQKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELSLDD
QVILLRAGWNELLIASFSHRSITVKDGILLATGLHVHRNSAHSAGVGAIFDRESAHNAEV
GAIFDRVLTELVSKMRDMQMDKTELGCLRAIILFNPDAKGLSSPSEVELLREKVYASLEA
YCKQRYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacagcagagattctcgtagtccagacagctcatccgtttcctcaccaccatca
ggtcagcgttcgcccccgttggccccttcagctgccgccatgacttccctgccacccatg
acttcagccgtgaacagtcccatcagcagcatgggctcacccttctccgtcatcagttct
tctctgggttctccttgccttccaggaacaccctctgtaggctacggccccatcagcagc
ccacagatgaacatgtttgccagaaacacagagatcaactccaccgtgtccatgtcagga
ctgcacgccgtcagcagctctgatgatgtcaaaccgcccttcggattgaagccgatgtcc
gcccacagcccagggcccatggtctctcagaaacgcttgtgtgcaatctgtggagatcgc
tcctctggaaagcactacggcgtgtacagctgcgagggctgcaagggctttttcaagcgc
actgtgaggaaggacttgagctacacatgcagagacaataaggactgtctggtggacaaa
cgccagaggaaccgctgccagtactgccgctaccagaagtgcctggccatggggatgaag
agagaggtggtccaagatgaacgacaacgatccgttcaagaggagcgtcagaggaacaag
gagcgagagggagaggtggagtccaccagcgcagcgaatgaagagatgcccgtggagaag
attctggaagcagagatggccgtggagcagaagactgagctgcatgcggatggcagctca
gggggaagctctccgaacgacccagtcacaaatatctgccaggcggctgataagcagctg
ttcactttggtggagtgggcaaaacggatccctcacttcagtgagctgtctctggatgac
caggtcatcctgctgcgagctggctggaatgagctactgatcgcgtcattctcccatcgc
tccatcacggtgaaggatggcattctgctggccaccggcctccacgtgcacaggaacagt
gctcacagcgcaggggtgggagccatctttgacagggagagtgcgcacaatgcagaggtt
ggggccatattcgacagggttctgacggagctggtgagcaagatgagggacatgcagatg
gataaaacagagttgggctgcctgagagccatcatcctcttcaacccagatgcaaaggga
ttgtcaagcccgagtgaagtggagttactgagagagaaggtctatgcatcgctggaggct
tattgtaaacagagatatcctgaccagcagggcaggtttgccaaactgctcctccgactg
ccagcgctgcgctctattggcctaaagtgcctggagcacctgttcttcttcaagctgatt
ggagacacccctatcgacaccttcttaatggaaatgcttgaagctccacatcagctgacc
taa
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