Carassius auratus (goldfish): 113062668
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Entry
113062668 CDS
T07313
Name
(RefSeq) nucleoprotein TPR-like
KO
K09291
nucleoprotein TPR
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113062668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113062668
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113062668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
113062668
NCBI-ProteinID:
XP_026088438
UniProt:
A0A6P6LVD9
LinkDB
All DBs
Position
45:859599..870852
Genome browser
AA seq
1828 aa
AA seq
DB search
MGGLDQRPRVKSCCLFSRQKGNEILELQCNLNNKEDEIACLQDQATSLKASNENLQRQAE
DMITKIREAKEQQANLEEKFRNELNANIKLSNLYKGAAADAEAKSEELSRAVDELHKLLK
EAGEAHKALEVKIAELESCKDKEIAELKEKISSQEKELDNANELLSVTKHRAEHVTTVSF
TASAVGKIIKPGMKLTEIYTAYTETQEQLQWEKLENKRLHKYLDDIVQEMEAKAPILKRQ
REEYERMQKSVCSLSAQLEQAVTEIHRLQKEADEGNKRASVFERDNQRFEVQLGDMAQQV
RVLLIELEEARGNYVMREEDEVCSADVSSTSEVISQHLVTFRSVEELQQQNQRLLVALRD
LSEEKEKVELEGDTMKRSEVEKYLEELQRELEQLKEKRTQDLQKVDAVARQRDMFRMFLT
QATGVTFSQGTGNEELILSTTPSCSPAVTPTALTPAGLFATAMESTESIEAKAALKQLQE
VFVAYKKEKAESEKVWTEQSDKLQDRVTALRSENTKISTQLEFTTKRFEMLQDNVEGYRK
EIASLNEKTQKQAATIQQSEQTIHRLTQDLRAAAEKLSIVESEAENLRKERDMLKMVEIR
LTQEKESFQAQQLGQNMLLTNLKSIQATLERSETDTRRRLTSQIEKQEREITQLLKRLEN
EVEQKHLLARNQNMQLMDVKKKLETQTSQYHRTREQLSAAQIELNNLKLQRSSRESWLVS
TLVHTGLQSSESDMEALCAQLRQAESKGEELAERLKITTASMEQYKAMSLNLEESLNKEK
QVTEHVRTSVQTQVEAAQERCKHLEQKLLEANKEKQSLLEEKSRAVASVEQEEKSPQMLF
KLSKLRKSLSSLQADHQNALERASFAAAQEQRSILDGQEQAKMTAEAQDKYEREMLLHAA
DVEALQAAKAQAMQADHLRQQLEEKVQSTSAQLLEARISWEEQEKIIKEEQSKLESRCED
LQRQNTLLHEQIQILSGQMASQLQRTTSESPLNISLTEEDKSPEQLMEILRFVRREKEIA
ESRLEVVRSESLRHRLRVEHLERELKDVQESLNVERERMQVTAKTLSQHDELMKKTETMN
VLMETNKMLREEKEKLEQELQDTQTKVHKLESNILPMQQSNAELSEKSGMLQAEKKLLEE
DIKRWKARTQHLVSQQQDTDPEEYKRLHSEREAHLKRIQQLVEETNRLKADAARSSGSLS
MLQSQLQNLRENLGKVMVERDSLKKDQEAKNLDIQEKLKTIAQVKKIGRHYKSQYEELRV
EYDKLVAAAASAPVQDQESQQASAQELQTLKESLNQSENRTRELEGHLENLKRTVGEREA
EACSAQEQASHLQAELTRLRQELQEKSSQEERLKQQLTEKEERTKKAIVMAKQKISQLTG
VKGQLQKENEELKQQQEEMEVRLSALKSQYEGRLSRQERELRELREQQERPGEQRDEPPE
QGSSKIHEPQRTIEQQQISLKSTPVAERGSASTSEPPTANIKPTPMAATSSKPPAIPGNK
STPRASIKPMITPAPVPTPTPTATVMPTTQVESQESMQSSDGPLEHVTVYGSASGSVRST
SPNVQTTLAQPPLNVQQQSQATAFIQPTQQQTQPPAEPSNQEPPAAVMLPNPQLDRPLST
PTGMWSATASTSSASAVSVSPSSALSKRPHEEEQESMSADTQSQDEPNDTPICKRVRIHR
AGLEEEMLAEDSTEAESVVLGDSQEAPDARQEMDEEPGPSQSVPGDQLLPPSSETHRSLG
EPDHHVIVIVSDTDGKGGHEEESEEEEEQDYGEEEEDDDDEDDNEEEDGVIREEEESNEV
SSSRDGNEADEGDDTEVHTRDEHQSEYN
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtctcgatcaaaggccaagagtgaagagctgctgtctcttttcccggcaaaaa
ggcaatgagatcctggagctccaatgcaaccttaataacaaggaggatgaaatcgcctgc
ctccaagatcaggcgaccagtctaaaggcatccaatgagaaccttcagaggcaagctgag
gatatgatcaccaagataagagaggcaaaggaacagcaagccaatttggaggagaagttc
aggaatgagctcaatgccaacatcaaactctcaaatttgtataagggagctgcagctgat
gcagaggccaagagtgaggagctcagcagagctgttgatgaacttcacaagctgctcaaa
gaggctggagaggcgcacaaagctctggaagtgaagattgcagagctggagagttgtaaa
gacaaagaaattgctgaactgaaagagaaaataagcagccaggagaaagagctggacaat
gctaatgagctgttgtctgtcaccaaacaccgagcagagcatgtgaccacagtgtccttc
acagcatctgcagttgggaaaatcatcaaaccaggcatgaaacttacagagatatataca
gcttatactgagactcaagaacaactacaatgggagaaactcgagaataaacgactacac
aagtacctagatgatattgtgcaggagatggaagcaaaggcacccatcctgaagagacag
cgagaagagtacgagcgcatgcaaaagtctgtttgcagtctctctgctcaacttgagcaa
gccgtgacggagatccaccgcttgcagaaagaagcagatgaagggaacaaacgtgcatct
gtgtttgagagagataatcagaggtttgaggtgcagctgggtgacatggctcaacaggtg
cgggtcctcctcattgagctggaggaagcacgtggtaactatgtgatgcgtgaggaggat
gaggtgtgttcagcggatgtgagcagcacttcagaggttatttctcagcacctggtcacc
ttccgcagcgttgaagagctgcagcagcagaaccagcgtctcctagtggcactacgagac
ctcagtgaggaaaaggaaaaggttgagttggagggcgacaccatgaaacgcagtgaggtg
gagaaatatcttgaggagctccagcgtgagttggagcagctgaaggaaaagagaactcag
gatctacagaaggttgatgctgtggcacgacaaagggatatgttccgcatgtttctgacc
caggcaactggagtcaccttctcacagggtactggtaatgaggagcttattctgagcaca
acccccagctgttctccagccgtcacacccactgcactcacccctgcaggactgtttgcc
acggcaatggagtccacagagtccatagaggccaaggctgctctgaagcagcttcaggaa
gtctttgtggcctataaaaaggaaaaagctgagtctgaaaaagtctggactgagcaaagc
gacaaactgcaggatcgagtgactgcactgcgctctgaaaacaccaagatctccacacag
ctggagttcaccaccaaacggtttgagatgctccaggacaatgtggagggataccgcaag
gagatcgcctctctgaacgagaagactcagaaacaggctgcaacaatccagcagagtgaa
cagaccatacaccgcctcacccaggacctgcgagcagcagctgagaaactctcaatagtt
gagtctgaagcagagaaccttcgtaaagagagggacatgttaaagatggtggagatcaga
ctgacacaagagaaggagtccttccaggcccaacagcttggccagaacatgctgctgacc
aatctcaagtcaatacaagcaaccctggagcgctctgagacggataccagacggcggctg
acttctcagattgagaagcaggagcgagagatcactcagctcctgaagagacttgagaat
gaggtggaacagaagcacctgctggcacgcaatcaaaacatgcagctgatggatgtaaag
aagaagctggaaacacagacttcacaataccacaggacaagagaacagcttagtgctgcc
caaatcgagcttaacaacctaaagctgcagaggagtagcagggagagctggctggtgtcc
actttggtacatacaggcctgcagagcagtgaaagtgacatggaagctctgtgtgcccag
ctgaggcaggctgagagcaagggagaagagctggccgaacgattgaagatcactactgcc
agcatggagcagtacaaggccatgagtcttaacttagaggagtccttgaataaagagaaa
caggtaactgagcatgtgcgaacatctgtgcaaacccaagtggaggcagctcaggagcgg
tgtaaacatctggagcagaaacttctggaagcaaacaaggagaagcagagcttgctggaa
gagaaaagcagagccgttgcttctgtggagcaagaggaaaaaagtccacaaatgttattc
aagttgagcaagctgaggaaatctctaagcagcctgcaggcggatcaccagaatgccctg
gagagagcttcttttgctgctgcacaagagcagcggtccatcctggacggtcaggagcag
gctaagatgacagctgaggcgcaggataagtatgagagggagatgttgctgcatgcggcc
gacgtggaagcactgcaggctgccaaagcacaggctatgcaggcagatcatctcagacag
cagctggaggagaaagttcagagcaccagtgcacagctactagaggctcgtatctcttgg
gaggagcaagagaagataatcaaggaggagcagtccaagttggagtctcgctgtgaggat
ctgcagaggcagaacacactccttcacgagcagatacagattctgagtggacaaatggcc
agtcagctgcagcgaaccaccagtgagagtccactcaacatctctctgacagaggaggac
aagtctccggagcagctcatggagatcctaaggtttgtgcgacgggagaaggagattgca
gagtcacggttggaggtggtccggagtgagagtctgaggcacaggctaagagtggaacat
ctggagagagagctgaaggatgtgcaagagagtctgaatgtggagcgagagaggatgcag
gtgactgcaaagactctgtcccagcatgatgagctgatgaagaagaccgagaccatgaat
gtgctaatggagaccaataagatgctgagggaggagaaagagaaactggaacaggagctg
caggatactcaaaccaaggtgcataaactggagtcaaatatcttgcccatgcagcagtcc
aatgcagagctgagtgagaagagtggtatgctacaggcagagaaaaagcttctggaagaa
gatatcaaacgctggaaagctcgcactcagcacctggtgagccaacagcaagacactgac
cctgaggagtacaagcggctgcattctgagagggaagcacacctcaaacgcatccagcag
cttgtcgaggagactaatcgactcaaagctgatgctgccaggagcagtggcagtttgagt
atgctgcaatcccagttgcagaacctaagggagaacttggggaaggtgatggtggagagg
gatagcctgaagaaagaccaggaggccaaaaatctggacatccaagagaaactgaaaacc
atcgcacaagttaaaaagattggtcgacattacaaatcccaatacgaggaactcagggtt
gaatatgacaagttggtagctgcagcagcatctgcaccagtccaggatcaagagtcccaa
caggcatcagctcaagaacttcagaccctcaaggagtccctcaaccaatcagagaacagg
acaagagaactggaaggccatctggagaatctcaaaagaactgtaggtgagcgggaagca
gaggcatgcagtgcacaggaacaggcctctcatctacaggcagagctcacacgactcagg
caagagcttcaagagaaatcttcccaggaggagcgactcaaacagcagctgactgaaaag
gaggagaggaccaagaaggctatagtaatggccaagcagaagatcagccagcttactggt
gtaaaaggtcagctccagaaagaaaatgaggagctgaagcaacaacaagaggaaatggaa
gtgcgattgagtgcactaaagtcacagtatgaggggcgtctgagcagacaggaaagggag
ctgcgagaactccgtgagcagcaagagagacctggagaacagagagatgaacctccagaa
cagggctccagcaagatccatgaaccgcaaaggacaatagaacagcaacagatctctctg
aagtccaccccagtggcagaaagaggaagtgcaagcacttcagagcctccaactgctaat
ataaagcccacaccaatggcagcaacctccagcaagcctccagccattccaggaaacaaa
tccaccccaagggccagcatcaaacccatgatcactcctgccccagtgcccacccctaca
cccactgcaacagtcatgcccaccacacaggtggagagccaagagtccatgcagtcttcc
gacggcccgcttgaacatgtgactgtgtatggcagtgccagcggttcagtgcggtccacc
agccctaatgttcagactacccttgctcaacctccgctgaatgttcaacagcagagccag
gccactgcattcatacagcccacccagcaacaaacccaaccccctgcagaaccatccaac
caggaacctcccgctgctgtaatgctcccaaacccacagctagacaggcctctttctaca
cctacagggatgtggagtgccactgctagcacaagcagtgccagtgcagtgtctgtgtct
cctagtagtgccttgagcaaacgcccccatgaagaggaacaagagagcatgtctgctgac
acacagtcccaggatgagcccaatgacacccccatttgcaagagggttcgcattcataga
gcaggtctagaggaagagatgttggctgaagacagcactgaggctgagagtgttgtactg
ggcgatagccaggaggctcctgatgctcgacaggagatggatgaggaaccaggaccgtct
cagtctgtccctggagatcaacttcttccaccttcctctgagacccatcgaagcctgggg
gagcctgatcatcatgtcatagtcattgttagtgacaccgatggtaagggaggccacgaa
gaggaatctgaggaggaagaagagcaggattatggggaagaggaggaagatgacgatgat
gaggatgataatgaggaggaggatggtgttattagggaagaagaagagagcaatgaagtg
agcagcagcagagatggcaatgaggccgacgagggagacgacacagaggtacacaccaga
gatgagcaccaatcagaatacaattga
DBGET
integrated database retrieval system