KEGG   Carassius auratus (goldfish): 113062668
Entry
113062668         CDS       T07313                                 
Name
(RefSeq) nucleoprotein TPR-like
  KO
K09291  nucleoprotein TPR
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113062668
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caua03019]
    113062668
Messenger RNA biogenesis [BR:caua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     113062668
SSDB
Motif
Pfam: TPR_MLP1_2
Other DBs
NCBI-GeneID: 113062668
NCBI-ProteinID: XP_026088438
UniProt: A0A6P6LVD9
LinkDB
Position
45:859599..870852
AA seq 1828 aa
MGGLDQRPRVKSCCLFSRQKGNEILELQCNLNNKEDEIACLQDQATSLKASNENLQRQAE
DMITKIREAKEQQANLEEKFRNELNANIKLSNLYKGAAADAEAKSEELSRAVDELHKLLK
EAGEAHKALEVKIAELESCKDKEIAELKEKISSQEKELDNANELLSVTKHRAEHVTTVSF
TASAVGKIIKPGMKLTEIYTAYTETQEQLQWEKLENKRLHKYLDDIVQEMEAKAPILKRQ
REEYERMQKSVCSLSAQLEQAVTEIHRLQKEADEGNKRASVFERDNQRFEVQLGDMAQQV
RVLLIELEEARGNYVMREEDEVCSADVSSTSEVISQHLVTFRSVEELQQQNQRLLVALRD
LSEEKEKVELEGDTMKRSEVEKYLEELQRELEQLKEKRTQDLQKVDAVARQRDMFRMFLT
QATGVTFSQGTGNEELILSTTPSCSPAVTPTALTPAGLFATAMESTESIEAKAALKQLQE
VFVAYKKEKAESEKVWTEQSDKLQDRVTALRSENTKISTQLEFTTKRFEMLQDNVEGYRK
EIASLNEKTQKQAATIQQSEQTIHRLTQDLRAAAEKLSIVESEAENLRKERDMLKMVEIR
LTQEKESFQAQQLGQNMLLTNLKSIQATLERSETDTRRRLTSQIEKQEREITQLLKRLEN
EVEQKHLLARNQNMQLMDVKKKLETQTSQYHRTREQLSAAQIELNNLKLQRSSRESWLVS
TLVHTGLQSSESDMEALCAQLRQAESKGEELAERLKITTASMEQYKAMSLNLEESLNKEK
QVTEHVRTSVQTQVEAAQERCKHLEQKLLEANKEKQSLLEEKSRAVASVEQEEKSPQMLF
KLSKLRKSLSSLQADHQNALERASFAAAQEQRSILDGQEQAKMTAEAQDKYEREMLLHAA
DVEALQAAKAQAMQADHLRQQLEEKVQSTSAQLLEARISWEEQEKIIKEEQSKLESRCED
LQRQNTLLHEQIQILSGQMASQLQRTTSESPLNISLTEEDKSPEQLMEILRFVRREKEIA
ESRLEVVRSESLRHRLRVEHLERELKDVQESLNVERERMQVTAKTLSQHDELMKKTETMN
VLMETNKMLREEKEKLEQELQDTQTKVHKLESNILPMQQSNAELSEKSGMLQAEKKLLEE
DIKRWKARTQHLVSQQQDTDPEEYKRLHSEREAHLKRIQQLVEETNRLKADAARSSGSLS
MLQSQLQNLRENLGKVMVERDSLKKDQEAKNLDIQEKLKTIAQVKKIGRHYKSQYEELRV
EYDKLVAAAASAPVQDQESQQASAQELQTLKESLNQSENRTRELEGHLENLKRTVGEREA
EACSAQEQASHLQAELTRLRQELQEKSSQEERLKQQLTEKEERTKKAIVMAKQKISQLTG
VKGQLQKENEELKQQQEEMEVRLSALKSQYEGRLSRQERELRELREQQERPGEQRDEPPE
QGSSKIHEPQRTIEQQQISLKSTPVAERGSASTSEPPTANIKPTPMAATSSKPPAIPGNK
STPRASIKPMITPAPVPTPTPTATVMPTTQVESQESMQSSDGPLEHVTVYGSASGSVRST
SPNVQTTLAQPPLNVQQQSQATAFIQPTQQQTQPPAEPSNQEPPAAVMLPNPQLDRPLST
PTGMWSATASTSSASAVSVSPSSALSKRPHEEEQESMSADTQSQDEPNDTPICKRVRIHR
AGLEEEMLAEDSTEAESVVLGDSQEAPDARQEMDEEPGPSQSVPGDQLLPPSSETHRSLG
EPDHHVIVIVSDTDGKGGHEEESEEEEEQDYGEEEEDDDDEDDNEEEDGVIREEEESNEV
SSSRDGNEADEGDDTEVHTRDEHQSEYN
NT seq 5487 nt   +upstreamnt  +downstreamnt
atgggaggtctcgatcaaaggccaagagtgaagagctgctgtctcttttcccggcaaaaa
ggcaatgagatcctggagctccaatgcaaccttaataacaaggaggatgaaatcgcctgc
ctccaagatcaggcgaccagtctaaaggcatccaatgagaaccttcagaggcaagctgag
gatatgatcaccaagataagagaggcaaaggaacagcaagccaatttggaggagaagttc
aggaatgagctcaatgccaacatcaaactctcaaatttgtataagggagctgcagctgat
gcagaggccaagagtgaggagctcagcagagctgttgatgaacttcacaagctgctcaaa
gaggctggagaggcgcacaaagctctggaagtgaagattgcagagctggagagttgtaaa
gacaaagaaattgctgaactgaaagagaaaataagcagccaggagaaagagctggacaat
gctaatgagctgttgtctgtcaccaaacaccgagcagagcatgtgaccacagtgtccttc
acagcatctgcagttgggaaaatcatcaaaccaggcatgaaacttacagagatatataca
gcttatactgagactcaagaacaactacaatgggagaaactcgagaataaacgactacac
aagtacctagatgatattgtgcaggagatggaagcaaaggcacccatcctgaagagacag
cgagaagagtacgagcgcatgcaaaagtctgtttgcagtctctctgctcaacttgagcaa
gccgtgacggagatccaccgcttgcagaaagaagcagatgaagggaacaaacgtgcatct
gtgtttgagagagataatcagaggtttgaggtgcagctgggtgacatggctcaacaggtg
cgggtcctcctcattgagctggaggaagcacgtggtaactatgtgatgcgtgaggaggat
gaggtgtgttcagcggatgtgagcagcacttcagaggttatttctcagcacctggtcacc
ttccgcagcgttgaagagctgcagcagcagaaccagcgtctcctagtggcactacgagac
ctcagtgaggaaaaggaaaaggttgagttggagggcgacaccatgaaacgcagtgaggtg
gagaaatatcttgaggagctccagcgtgagttggagcagctgaaggaaaagagaactcag
gatctacagaaggttgatgctgtggcacgacaaagggatatgttccgcatgtttctgacc
caggcaactggagtcaccttctcacagggtactggtaatgaggagcttattctgagcaca
acccccagctgttctccagccgtcacacccactgcactcacccctgcaggactgtttgcc
acggcaatggagtccacagagtccatagaggccaaggctgctctgaagcagcttcaggaa
gtctttgtggcctataaaaaggaaaaagctgagtctgaaaaagtctggactgagcaaagc
gacaaactgcaggatcgagtgactgcactgcgctctgaaaacaccaagatctccacacag
ctggagttcaccaccaaacggtttgagatgctccaggacaatgtggagggataccgcaag
gagatcgcctctctgaacgagaagactcagaaacaggctgcaacaatccagcagagtgaa
cagaccatacaccgcctcacccaggacctgcgagcagcagctgagaaactctcaatagtt
gagtctgaagcagagaaccttcgtaaagagagggacatgttaaagatggtggagatcaga
ctgacacaagagaaggagtccttccaggcccaacagcttggccagaacatgctgctgacc
aatctcaagtcaatacaagcaaccctggagcgctctgagacggataccagacggcggctg
acttctcagattgagaagcaggagcgagagatcactcagctcctgaagagacttgagaat
gaggtggaacagaagcacctgctggcacgcaatcaaaacatgcagctgatggatgtaaag
aagaagctggaaacacagacttcacaataccacaggacaagagaacagcttagtgctgcc
caaatcgagcttaacaacctaaagctgcagaggagtagcagggagagctggctggtgtcc
actttggtacatacaggcctgcagagcagtgaaagtgacatggaagctctgtgtgcccag
ctgaggcaggctgagagcaagggagaagagctggccgaacgattgaagatcactactgcc
agcatggagcagtacaaggccatgagtcttaacttagaggagtccttgaataaagagaaa
caggtaactgagcatgtgcgaacatctgtgcaaacccaagtggaggcagctcaggagcgg
tgtaaacatctggagcagaaacttctggaagcaaacaaggagaagcagagcttgctggaa
gagaaaagcagagccgttgcttctgtggagcaagaggaaaaaagtccacaaatgttattc
aagttgagcaagctgaggaaatctctaagcagcctgcaggcggatcaccagaatgccctg
gagagagcttcttttgctgctgcacaagagcagcggtccatcctggacggtcaggagcag
gctaagatgacagctgaggcgcaggataagtatgagagggagatgttgctgcatgcggcc
gacgtggaagcactgcaggctgccaaagcacaggctatgcaggcagatcatctcagacag
cagctggaggagaaagttcagagcaccagtgcacagctactagaggctcgtatctcttgg
gaggagcaagagaagataatcaaggaggagcagtccaagttggagtctcgctgtgaggat
ctgcagaggcagaacacactccttcacgagcagatacagattctgagtggacaaatggcc
agtcagctgcagcgaaccaccagtgagagtccactcaacatctctctgacagaggaggac
aagtctccggagcagctcatggagatcctaaggtttgtgcgacgggagaaggagattgca
gagtcacggttggaggtggtccggagtgagagtctgaggcacaggctaagagtggaacat
ctggagagagagctgaaggatgtgcaagagagtctgaatgtggagcgagagaggatgcag
gtgactgcaaagactctgtcccagcatgatgagctgatgaagaagaccgagaccatgaat
gtgctaatggagaccaataagatgctgagggaggagaaagagaaactggaacaggagctg
caggatactcaaaccaaggtgcataaactggagtcaaatatcttgcccatgcagcagtcc
aatgcagagctgagtgagaagagtggtatgctacaggcagagaaaaagcttctggaagaa
gatatcaaacgctggaaagctcgcactcagcacctggtgagccaacagcaagacactgac
cctgaggagtacaagcggctgcattctgagagggaagcacacctcaaacgcatccagcag
cttgtcgaggagactaatcgactcaaagctgatgctgccaggagcagtggcagtttgagt
atgctgcaatcccagttgcagaacctaagggagaacttggggaaggtgatggtggagagg
gatagcctgaagaaagaccaggaggccaaaaatctggacatccaagagaaactgaaaacc
atcgcacaagttaaaaagattggtcgacattacaaatcccaatacgaggaactcagggtt
gaatatgacaagttggtagctgcagcagcatctgcaccagtccaggatcaagagtcccaa
caggcatcagctcaagaacttcagaccctcaaggagtccctcaaccaatcagagaacagg
acaagagaactggaaggccatctggagaatctcaaaagaactgtaggtgagcgggaagca
gaggcatgcagtgcacaggaacaggcctctcatctacaggcagagctcacacgactcagg
caagagcttcaagagaaatcttcccaggaggagcgactcaaacagcagctgactgaaaag
gaggagaggaccaagaaggctatagtaatggccaagcagaagatcagccagcttactggt
gtaaaaggtcagctccagaaagaaaatgaggagctgaagcaacaacaagaggaaatggaa
gtgcgattgagtgcactaaagtcacagtatgaggggcgtctgagcagacaggaaagggag
ctgcgagaactccgtgagcagcaagagagacctggagaacagagagatgaacctccagaa
cagggctccagcaagatccatgaaccgcaaaggacaatagaacagcaacagatctctctg
aagtccaccccagtggcagaaagaggaagtgcaagcacttcagagcctccaactgctaat
ataaagcccacaccaatggcagcaacctccagcaagcctccagccattccaggaaacaaa
tccaccccaagggccagcatcaaacccatgatcactcctgccccagtgcccacccctaca
cccactgcaacagtcatgcccaccacacaggtggagagccaagagtccatgcagtcttcc
gacggcccgcttgaacatgtgactgtgtatggcagtgccagcggttcagtgcggtccacc
agccctaatgttcagactacccttgctcaacctccgctgaatgttcaacagcagagccag
gccactgcattcatacagcccacccagcaacaaacccaaccccctgcagaaccatccaac
caggaacctcccgctgctgtaatgctcccaaacccacagctagacaggcctctttctaca
cctacagggatgtggagtgccactgctagcacaagcagtgccagtgcagtgtctgtgtct
cctagtagtgccttgagcaaacgcccccatgaagaggaacaagagagcatgtctgctgac
acacagtcccaggatgagcccaatgacacccccatttgcaagagggttcgcattcataga
gcaggtctagaggaagagatgttggctgaagacagcactgaggctgagagtgttgtactg
ggcgatagccaggaggctcctgatgctcgacaggagatggatgaggaaccaggaccgtct
cagtctgtccctggagatcaacttcttccaccttcctctgagacccatcgaagcctgggg
gagcctgatcatcatgtcatagtcattgttagtgacaccgatggtaagggaggccacgaa
gaggaatctgaggaggaagaagagcaggattatggggaagaggaggaagatgacgatgat
gaggatgataatgaggaggaggatggtgttattagggaagaagaagagagcaatgaagtg
agcagcagcagagatggcaatgaggccgacgagggagacgacacagaggtacacaccaga
gatgagcaccaatcagaatacaattga

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