Carassius auratus (goldfish): 113062776
Help
Entry
113062776 CDS
T07313
Name
(RefSeq) CASP8-associated protein 2-like isoform X1
KO
K25593
CASP8-associated protein 2
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113062776
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
113062776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding_7
Motif
Other DBs
NCBI-GeneID:
113062776
NCBI-ProteinID:
XP_026088527
Ensembl:
ENSCARG00000044635
UniProt:
A0A6P6LXF9
LinkDB
All DBs
Position
45:157076..172853
Genome browser
AA seq
1957 aa
AA seq
DB search
MDLMDELYGDLDDKPFGTLHLIEDSVDIYTGLENSPKIDGNRFKVNPLLSPHTMESMDIY
EDIFREEQEEKDATSNELKHKFDGAQKQVKELFSQLQLLQTKNSSLNSENILLKKNICSL
IKTARMEIVRKDGEISRLSNRSGQGIYGQNVCRSKMEIGPTNTRPSFNNSTCSVLISQGT
RKDNVLNEVNQHKGRNQLSDYFTYPPTTSTKTPQPFEVLQRCPRTDLDNPLQCQNKSAAK
SNSKTIHCSQTLTVQPEQEYIPVHPNRTSEIVKNPTTFTVAGVSNALKTNDSALRVPDIT
TDCSLKDNKNSPSELEDKLEKPQKCTSRDKQCNSNDANESQKSQRRENSKSGRTEKDLIK
DSSVSNENRNQQPEVPVNLKSSEQLKSPSSRSHKASPSVSSQSSKSLVKTAAEVETQSQR
QLNNQNADRISRETKPSGLSTTTCTVVDEASHSQSHKGKKRDSSGHERNKEKSFSAERRS
SRTERSRNHEQKRQKESDRSKRNEGNNSSSSSKERSNRSDSSKEYERRSVREKDNKDEDK
RSKKQVDACGQAFSSAICDFQHKDVYKEKSSKSKGSHIYDNKTRKMEDFKCPDKNGNSDE
NCFGAKGIDKDRKRKKGGHLEHRVHKHKASKNYLTKDNRNSSPKGHNVVGKGQDSKSEQD
RHLETASPSMVAVGSDPCKTTEDNSPNRKLSFMETLNLTLSPLKKQKQSSDPREAIGVTS
KDASPENSNLSDPGEEFFVIDELKDSQDNVEQEDVDPLPTAPSKTEDFTSSCKHSGQVVD
LFTAVVSEKPSVEQTDMDVQEENANKSQEAVDKVPAIDKSKEEKKTKISESNMLDKDSLS
KLTLTRESPNHVCNNGTEDSLRFVNNSVFSKNLPIKTSEVAVPDNIPDSRVEGYQQQDPF
TNVSEETKRSPPIKSQDLPPRSNGICQDDVSSSDKAQSIPKINSSRISDSSVNMEVSSST
ISADIVEPSKIICDFEEVDTSTTVGEETMSSSQPGFPEPDSTEKEEQSTKSSNPVLFCPD
EDSMMLTLKNIKVIPEPLSPLTSPVRQVKKLQPHSAEKQPHVKSLNKDLSSVTTGCNEDD
VNMDMNKENKSPDTSVTAPSYKGTKYALSASGTEKDELEDGEIVSESKEEGPLFIQTPRV
KDKSTLRTDPSPKLSAVWKRVSPKKSCIPAKYSERSKSSKSSASNVSPSLSKRRFKTVSP
PLKAAVYTIDGFMNMLRSIRVELRKKYMKLQKNVTKTAFCCIVDMSQASFIEFINAVDLE
KMCCQGNGIKVRLNKIISSIMSKVTKNGIVNRIFEQRAGDLKQKLWTFVDGQFEFLFKEL
NTTLKSGSETSKNGSFENKNAILKRKETESEVVEKKTFNTPGHLHRVKMSKVDTGSFVRA
APPNNLPCRGLGSRGKNIKAVMNEDDQPAKVATSHQPPTSSSERSVHEGTTGSETRISSN
VQHLSHNGSTQDFEILTEQQTTSLTFNLVSDSQMGEIFKCLLQGSDFLESSVPIGNNTSC
PLSTPRKEGLRGESLIGIMTPNKTTPSKFITSWPSISPYKFASNNKLLVDPAILDESCLL
EVPSNSEPCRLSLQSTVIPQKSYSILAEDLAVSLTIPSPLKSDSHLSFLHPGTGQPPSSS
NSVLSAHYSEDAVLDGEDATEQDIHLSLDTDNSSCGSSPSRTWEDSDSPGFQFQPNLPMQ
AVVMERSNDHFIVRIRRTSSGPFKSNRNEGKAGPVSAECQEPFLKPNLTLTHEDLGSTPG
ETSNKIPAIVDKSSNISDKAIEAQQSSQKSSSEGVCDEQTSLNNDEHVSKEACITAHEKS
SATESETSEVVSGKVKSAIQSSHAPESETERVSRKSKEHRSAPKAKHQKVKKSQDKHSKS
RHKKRSKSSTEKHSKIAVPQVSPSNLSAKNVIRKKGEVVVTWTRDEDRDILIEIKMRGTS
PKTFGALSKRLKKSTEQIEERFSQLMKLFKKKGKMEN
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atggatttaatggatgaactttatggagatcttgatgacaagccttttggtactctgcat
ctcattgaagactcggtggatatatacactggcctggaaaacagccctaagattgatggg
aacagatttaaagtcaaccctctcctttccccacacacaatggaatcaatggatatatat
gaggacattttcagggaagaacaagaagaaaaggatgcaacttctaatgagttaaagcac
aaatttgatggagctcaaaagcaagttaaggaactgttctcacagttacagctactgcag
acaaagaattccagtttgaacagtgaaaacatactcctgaagaagaacatttgttctctc
atcaagacggctagaatggagattgtgcgtaaggatggggaaattagcagactcagtaac
aggtctggtcaaggaatttatggtcaaaatgtttgtcgatctaaaatggaaattggtccg
acaaacacaaggcctagtttcaacaattctacatgttctgttttgatatcacaaggtact
agaaaagataatgttctgaatgaagtaaatcagcacaaaggtagaaaccaactgtcggat
tacttcacatatccaccaacaacatcaactaaaacaccacaaccatttgaggtgctccag
agatgccctagaactgatcttgacaatcctctgcagtgtcagaataaatctgctgctaaa
tctaacagtaagactattcactgttctcagaccctcactgttcaaccagagcaggagtac
atacctgttcatcctaacagaacatcagagattgtaaaaaatcctaccacatttacagtg
gcaggtgtttcaaatgctctcaaaacgaatgactctgcactgagagttcccgatataact
actgattgtagtttgaaagacaataagaacagtccatcagaactagaagacaagttagaa
aaacctcaaaaatgcacaagccgagacaaacagtgtaactcgaacgatgcgaatgagtca
caaaagtctcaaagaagagagaacagcaagtcaggaagaactgaaaaggatctcataaaa
gatagttctgtgtccaatgaaaacaggaatcagcagcctgaggttccagttaatcttaaa
agttcagaacagttgaaaagcccttcctcgcggtcacacaaagcctcaccatctgtctct
tcccagtcatccaaaagtttagttaagaccgctgcagaagtagagacacagagtcaaagg
caattgaataatcaaaatgcagacagaattagcagagaaacaaaaccctctggattgagc
accacaacttgtactgtggtggatgaagcaagccattcccaaagccacaaagggaagaaa
agagattcaagtggccatgaaaggaacaaggagaaaagtttcagtgcagaaaggaggagc
agcagaactgaaagaagcagaaaccatgagcagaagaggcagaaggagagtgacaggagt
aaaagaaatgagggtaacaacagcagtagtagtagcaaagaaagaagcaacagatcagac
agtagcaaagagtatgagcgaaggagtgtgcgggaaaaggataataaagatgaagataaa
agatctaagaaacaagttgatgcttgtgggcaagctttttcttctgccatatgtgatttt
caacacaaggatgtttataaggagaaatcatcgaaaagcaaagggtctcacatctatgat
aacaaaactagaaagatggaggatttcaaatgccctgacaaaaatggaaattctgatgag
aattgttttggagccaagggtatagacaaggacaggaaaagaaaaaaaggtggacatttg
gagcatagggtacataagcacaaagcatcaaaaaattatcttaccaaagataatagaaat
agctctcctaaagggcacaatgttgttggaaaaggtcaagatagtaagagcgagcaagac
agacaccttgaaactgcgtcaccatcaatggtagctgtcggcagtgatccctgcaaaaca
actgaggataatagtccaaacagaaaactgagtttcatggaaacactgaatcttacccta
tcacctcttaaaaaacaaaagcagtcctctgatccaagagaagccattggagtaacatct
aaagatgcctcacctgaaaatagcaacttatctgatcctggggaggagttctttgtcata
gatgaattaaaggacagccaggacaatgttgagcaagaggatgtggaccctctgcccaca
gctccaagtaaaacagaagactttaccagttcttgcaaacattctggacaagttgttgat
cttttcaccgctgtagtctccgagaagccctcagttgaacaaacagatatggatgtacaa
gaagagaatgccaacaaaagtcaagaggctgtggacaaagtgccagcgattgataaaagc
aaagaggagaaaaagaccaagatttcagaatccaatatgttagacaaagattcattatca
aaattaacccttacaagagaatctccaaatcatgtatgtaataacggcactgaagactcc
ctgagatttgtaaataattctgtgttctctaaaaatttgcctattaaaacgtcagaagtg
gcagttccagataatattcctgattcaagagttgaaggttatcagcagcaagatcctttt
accaatgtatctgaggaaacaaaaaggagtcctccgatcaagtctcaggatttaccacca
agatcaaatgggatatgtcaagatgatgtgtcatcctcagacaaggcacaaagtattcct
aaaattaattcttctaggatttctgatagttctgtcaacatggaagtttcctctagcaca
attagtgcagatattgttgagccaagcaaaattatttgtgattttgaagaagtggatact
tccaccactgttggagaggagaccatgtcatcttcacaacctggtttcccagagccagat
tccacagagaaagaggaacagagcacaaagtcatcaaaccctgttttgttttgccctgat
gaagactccatgatgcttactcttaagaacatcaaagttattccagagcccctcagccct
cttacaagcccagtccgtcaggtgaagaaactacagcctcacagtgctgagaagcaacca
catgttaaaagtcttaacaaagatctctcatctgttacaactggctgtaatgaggatgat
gtaaatatggacatgaacaaggagaataaatcacctgacacatctgtcacagctccctcc
tacaaagggacaaaatatgccctctccgctagtggaactgagaaagatgagctagaggac
ggtgaaatagtgagtgaaagtaaagaagagggtcctctgtttatccagactccaagagta
aaggacaaatcaactttaaggactgatccaagtccaaagctatctgcagtttggaaaaga
gtgtccccaaagaaatcttgcatccctgctaaatattcagagcgaagcaagagttcaaag
tcatctgcttctaatgtcagtcccagcttaagtaaaagacgctttaaaactgtcagccca
ccattgaaagcagccgtctacaccatagacggattcatgaacatgttaagatctattcga
gttgagttgaggaaaaagtacatgaagcttcaaaaaaatgtcactaaaacggctttctgc
tgtatcgtggatatgtctcaagcttcttttatagaattcattaatgctgttgacttggaa
aaaatgtgctgccaaggcaatggcatcaaagtaagacttaataaaataatttcatctatc
atgagcaaggtcaccaagaatggcattgtcaatcgtatctttgagcaaagagctggagac
ctcaaacagaagttgtggacatttgtggatgggcagtttgaattcttgttcaaggaactg
aacacaacactcaaaagtggatctgagacatcgaagaatggatcatttgaaaataaaaat
gcaattcttaaaagaaaagagactgaaagtgaggtagtggaaaaaaaaacttttaacaca
ccagggcatcttcacagggtcaagatgtcaaaagttgacacaggaagttttgtcagagcg
gcccctccgaacaatctcccttgccggggccttgggagcaggggtaaaaacatcaaagct
gtcatgaatgaagatgatcagccggcaaaggtggcaacatcacatcagcctcctacttca
tcctctgaaaggtctgtccatgaaggtaccactggatctgagactagaatatcttccaat
gtccaacatctctcccataatggatcgactcaggactttgaaattctcaccgagcagcaa
acaacaagcttaaccttcaacttggtctccgactctcaaatgggagagatattcaagtgt
cttttgcaagggtctgatttccttgaatccagtgttcccataggcaacaacacaagttgt
ccactcagcacacctcgaaaggaaggacttcgaggggagagtttgattgggataatgacc
cccaataagacaaccccatctaaattcatcacatcctggccttctatttccccctacaag
tttgcttcgaataacaaactgctagtagacccagccattcttgatgagagctgcttgtta
gaagttccttctaattctgaaccatgccggctttcacttcagtcaaccgtaatccctcag
aaatcatactctatcttggcggaagatctagccgtgtcccttaccattccctcaccacta
aagtcagatagtcatttgagtttcttgcaccctggaactggacagccaccgtcttcctca
aacagtgtcctgagtgcccattatagtgaagacgctgttcttgatggagaagatgccact
gagcaggacatacacctttctctggacactgacaactctagttgtgggtcgagtcccagc
agaacatgggaggactctgattcacctggtttccaattccagcccaatttaccaatgcag
gctgtggtaatggagaggtcaaatgatcatttcattgtgcgaataagacgaacatcatct
ggcccatttaaaagtaatcgaaatgaagggaaagcaggaccagtatcagctgaatgtcaa
gagccgtttctcaaacctaatctcactctgacccatgaagacctgggttccacacctgga
gagacatcgaataaaatcccagctatagtagataagtccagtaacatttcagataaagca
atagaagctcaacagtcaagccaaaaatcctcatctgaaggtgtttgtgatgaacaaaca
tccctcaacaatgatgagcatgtttccaaagaagcatgcattactgcgcatgagaaaagt
agtgcaacagagagtgaaacatcagaggtggtgtcaggaaaagtaaagagcgccattcag
agctcacatgcaccagagtctgaaaccgagagggtgtcaaggaaaagcaaggaacacagg
tcagcaccaaaggcaaagcaccaaaaagtcaagaaatctcaagataaacattccaagtct
aggcataagaaaaggtcaaaatcctccacagaaaaacactccaaaattgcagtacctcag
gtgtcccctagcaacctgtctgctaaaaatgtaattaggaagaaaggggaggtagtggtg
acgtggaccagggatgaagatcgggacatactcattgagattaaaatgaggggcacttca
cccaagacatttggtgctctgtcaaaaaggttaaagaagtcaacagagcagatcgaggag
cgattctctcaactgatgaagctgttcaagaagaaagggaaaatggagaattga
DBGET
integrated database retrieval system
