Carassius auratus (goldfish): 113063374
Help
Entry
113063374 CDS
T07313
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04137
Mitophagy - animal
caua04140
Autophagy - animal
caua04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113063374
04137 Mitophagy - animal
113063374
04148 Efferocytosis
113063374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113063374
Transcription factors [BR:
caua03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113063374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
113063374
NCBI-ProteinID:
XP_026089492
Ensembl:
ENSCARG00000023893
UniProt:
A0A6P6M070
LinkDB
All DBs
Position
45:14667655..14675715
Genome browser
AA seq
716 aa
AA seq
DB search
MRLTISYLRMRKLLSSDEEEKENEEESQLNSFYLKALEGFLMVLSEDGDMVYLSENVTKS
MGLTQFDLTGHSIFEFSHPCDHEELREMLVHKTGSKKTKEQNTERSFFLRMKCTLTSRGR
TVNIKSATWKVLHCAGHVRVQERSEDSGDSGFKEPPLTYLVLICEPIPHPSNIEVPLDSK
TFLSRHTLDMKFSYCDERITELMGYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQA
TTGQYRMLAKKGGFVWVETQATVIYNPKNSQPQCIVCVNFVLSGIVEGDVVLSLQQTVTE
PEAEEKENKEIEDEASEVDILKLFKPESLKCPIKSSELYEKLKGKPEALTVLAPAAGDSI
ITLDFNNSDSDMQLLKEVPLYNDVMLPSSSEKLPISLSPLTPLDSTPVLTKLETGAEDFP
FCSASDRGPDSTNSSSTSGLGSSGPNSPMEYCFQVDSDISSEFKLDLVEKLFAIDTEAKT
PFSSQAMEDLDLEMLAPYIPMDDDFQLHIPSSLDPLPSGPHSVSAMSSLFQPLPSPASPA
SSSSSVMKQEPSSQAPSPLHLLQEVCSAPVSPFSGSRDVSPARSPTPQNSNQLNNRELSP
KMLAIQNAQRKRKLEEVTSLCEAVGLGALLQSVDSVVEPGKRAKVLEVKGSSVLGGNKTI
LILPSDVASRLLCSSLESSHGLPQLTRYDCEVNAPVQDRHHLLQGEELLRALDQVN
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgaccatcagctacctgcgcatgaggaagctgctgagctctgatgaagaagag
aaggagaatgaggaggagagtcagctgaacagcttttatctgaaggccttggagggtttc
ctcatggtcctgtctgaagatggagacatggtttatctctctgagaatgtcaccaaaagc
atgggcctcacacagtttgatctgactggtcacagcatctttgaattttcacacccatgt
gaccatgaggagctacgagagatgctggtccataagaccggatccaaaaagaccaaggaa
caaaatactgagcgcagcttcttcctgcgtatgaagtgcacgctcactagcagagggcgg
actgtcaatatcaagtctgctacatggaaggttcttcactgcgctggtcacgtccgtgtg
caggagcgcagcgaggattcaggagactctggctttaaagagcctcctctgacctacctt
gtgctcatctgtgagcccattcctcatccctcgaacattgaggtgcctctggacagcaag
acctttcttagccgccacactctggacatgaagttctcgtactgtgatgaaaggatcaca
gagctgatgggatatgagccagatgatctcctgaacagatctgtgtacgaatactatcat
gccctggattcagatcacctcaccaagacacatcacaacttgttcgccaagggccaggcc
accacaggccagtaccgcatgctggctaagaaaggtggttttgtgtgggtggagactcag
gccactgttatctacaaccccaagaattctcagccgcagtgcattgtgtgcgtcaacttc
gttctcagtggcattgtggagggggatgttgtcctgtccttgcagcagactgtgacagaa
cctgaggctgaggagaaagagaacaaggagatagaagatgaggcctctgaggtggacata
ctcaaactcttcaagccagaaagcctcaagtgtcccataaagagctctgaactttatgag
aagctgaaagggaagcctgaagctcttactgtgttggcgcctgctgcaggagactccatc
atcactctggacttcaacaactcggattctgacatgcagctgctgaaggaggtgcccctc
tacaatgatgtcatgctgccctccagcagcgagaagctgcccatcagtctgtctcctctg
accccccttgactccaccccagtcctgaccaaactagagaccggagcggaggacttccct
ttctgctctgcttctgatcgtggtccagactccacaaactcatcttccacatctggactg
ggctcctcggggcccaacagccccatggaatactgtttccaagtagactcagacatcagt
tctgaattcaaactggacctggttgagaaactgtttgctattgataccgaggcaaagacc
ccttttagctcccaggccatggaggatctcgacctagagatgctggctccatacatccca
atggatgatgacttccagctgcatatcccctcttcgctggatccgctcccctctggccct
cactctgtgtccgccatgagctccctgttccaacccttaccctcccctgcatctccagcc
tcttcctccagcagcgtaatgaagcaggagccgtcatcccaggccccttcacccctgcac
ctgctacaggaggtgtgcagtgcccctgtgtcacccttcagcggcagtcgcgatgtttcc
cctgctcggtctcccaccccacagaacagcaatcagctcaacaacagagagctgtcacca
aagatgctagccatccagaatgctcaacgtaagaggaagttggaggaagtgacatcactt
tgtgaggctgttggactgggtgctttgcttcagagtgtggacagtgttgtcgaacctgga
aagagggcaaaggttttagaggttaaaggatcgagtgtgcttggaggaaataaaaccatt
ctcatactgccctctgatgtggccagtcgcctgttgtgcagttctttagagagcagccat
gggctgcctcagctaacacgttacgactgcgaagtcaacgctcccgtgcaggaccgccat
catctcctgcagggagaggagctcctgcgtgctctggaccaagtcaactga
DBGET
integrated database retrieval system
