Carassius auratus (goldfish): 113063460
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Entry
113063460 CDS
T07313
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113063460
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113063460
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
113063460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
113063460
NCBI-ProteinID:
XP_026089671
Ensembl:
ENSCARG00000011492
UniProt:
A0A6P6M1J0
LinkDB
All DBs
Position
4:24135112..24164683
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AA seq
799 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGREFSKSAHEGTVEAMQKDPIVVQVLRRGPSARNQ
GSLQEVCVVDVCTQTDITFEHIMALAKMRPTTPPVPDICPFLLSDSCHSIQTMEHEYFEC
PEYVASTQAEVDRAVEFECEEIELCRMNSQEKLGLTLCYRTDDEEDTGIFVGQVELNSIA
ARDGRIREGDRILQINGHDVQNREEAVALLSNENSRSIVLLVTRPEGQMDGSWLDEDHQD
FLEELKMEILEEQKKEGILQTAGCVMRSKRHDDASASKDSATCSSTIMEKERGVKCSFEE
SSEHEMLSRPQTWTQKQLRDRWEAGSHLVPMDTVSLTRQEKGMEGKLSENGVECDHFQQL
LELKCQIRNSGECGLVYRRSSTIECSLTEQGGSGVARELHMLNEELRSIELECQSIMQAH
QLRRSKHDSPRTDKESRLHRGKLADINEHPERIQSEKLKDKDSSSAYNSAESSRSTPLGT
EGSPDHSLHRRVHLTNQRNLRSTQNLQSPYNSPILSLPSQSSPNCSPAYMCTSFTPPLQT
PITSPGSQGPSQAFSSSLEQSPSNPSESDPALPADDERCEKERNRNRVATARHYQSPYHS
NTTATQPPSTRHYQSYLQFLQQHSSSSLEYSQSQLSLLSLRGRPGPSPPGRLEWKVKVRA
DGTRYVARRPTRDRILRERALRIREERSGGMTTDDDAVSELKMGRYWSKEERKQQLARAR
EQRRRREFMQRSRLECLRETMGTASGEVSILELSHKKMMKKRNKKILDNWMTIQELMSHG
ARAPEGTKVHNAFLSVTTV
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtaacctgtgcacgctgcagaagagagaagagcactacaagctgctgtatgag
atcgcacaggtgaatgggcgtgaattttccaagtctgcacatgagggaacggtggaggcc
atgcagaaggatcccatcgtggtgcaggtgttgaggcgggggccctcggcccggaaccag
ggcagtctgcaggaagtgtgtgtggtggatgtgtgcactcagacggacatcacctttgag
cacatcatggctctggctaagatgagacccaccaccccacctgtgccagacatctgcccc
ttcctgctgtcggacagttgtcattccattcagactatggagcatgagtattttgaatgt
ccggaatatgtggccagcactcaggcagaggtggacagggcagttgaattcgagtgtgag
gagattgaactctgtcgaatgaacagccaggagaagctgggtctcacactctgttaccgc
actgatgatgaggaagatacaggcatttttgttggtcaggtcgagctcaacagcatagct
gcaagggatggacgcatcagagagggagacagaattttacagataaatggtcatgacgtg
cagaacagggaagaggctgtcgctctcctctcaaatgaaaattccagatccatagtttta
ctcgtcaccagacctgaaggacagatggatggaagctggcttgatgaagaccatcaagat
ttcctagaggagctgaagatggagattttagaagaacagaaaaaggagggaattcttcaa
accgctggttgtgtaatgcggtctaaaagacatgatgatgcctcagcaagtaaagattca
gcaacatgttcctctaccattatggagaaggaaagaggcgtgaaatgcagctttgaggag
agctctgaacatgaaatgctgtctcgtccccaaacatggactcaaaaacaacttcgggac
aggtgggaagcaggctcgcatttggttcctatggacaccgtaagcttgaccaggcaggaa
aagggtatggagggcaagttgagcgagaatggagtggagtgtgaccatttccagcaactc
ctggagctcaagtgccagatccgtaatagtggagaatgcgggttggtctacaggcgaagc
agtactattgagtgcagcctgacggagcagggtggaagcggagtggcacgggagctgcac
atgctcaacgaagagctgcgcagcattgaacttgagtgccagagcatcatgcaagctcac
caactgcgcaggagcaagcacgattctcctcgaacggataaggaaagtcgactgcatcgt
ggcaagcttgcagatatcaacgagcatcctgagagaatacaaagtgagaagctcaaagat
aaagacagctccagtgcctacaattcagccgaaagttcccgctcgaccccactgggcact
gaaggttcaccagatcactccctacatcgtcgagtccacctgaccaatcagaggaacctt
cggagtacccaaaacttgcagagtccctacaatagtcccattttgtctttacccagccaa
agtagccctaattgtagtcctgcctatatgtgcaccagcttcacaccacccttacagacg
cccatcaccagtcctggttcacaaggacccagccaggccttctccagcagcttggagcaa
agccccagcaatccctcagagtcagacccagcgcttccagctgatgatgagcgctgtgag
aaagaaagaaaccggaatagggttgcaaccgctcggcactaccaatcaccctaccacagc
aacaccacagcaacccagcctcccagcacacgacactaccagagttacctacagttccta
caacaacattcctcttcctctctggagtactcccagagccagcttagcctcctcagcctt
cgtggacggccgggaccctcgccacctggccgacttgaatggaaggtcaaagtacgagct
gacggaaccagatatgtggcacgtcggcccacacgggaccgcatcctgcgtgaacgagcc
ttacggatccgggaggaacgcagcggtgggatgacaacagatgatgacgcagtcagcgag
ttgaagatgggccggtactggagtaaagaagaacgcaagcagcagttagcacgggccagg
gagcagaggcgcaggagggaattcatgcagaggagccggcttgagtgcctcagggagacc
atggggacggcaagcggagaggtcagcatcctggagctcagccataagaagatgatgaag
aaacgaaacaagaagatccttgacaactggatgaccattcaagagctcatgagccatgga
gcacgagcacctgagggcaccaaagttcacaacgccttcctgtcagtcaccacagtttag
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integrated database retrieval system
