Carassius auratus (goldfish): 113063487
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Entry
113063487 CDS
T07313
Name
(RefSeq) interphotoreceptor matrix proteoglycan 1-like isoform X1
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113063487
Glycosaminoglycan binding proteins [BR:
caua00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
113063487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
EGF
DUF4214
Motif
Other DBs
NCBI-GeneID:
113063487
NCBI-ProteinID:
XP_026089715
Ensembl:
ENSCARG00000054766
UniProt:
A0A6P6LYZ9
LinkDB
All DBs
Position
45:complement(18669159..18698963)
Genome browser
AA seq
1448 aa
AA seq
DB search
MSLKCGHLVTLFFLIVSVAGIQDRSSLNPSETLHTISLPNPPKQNSGMRTRFEMEKHRIK
RSDFFHSEVKVCPQETVREVIASHQTYYTLRVCQEAVWEAFRIFLDRIPSSSEYQQWVHK
CQHDSMCISDLAMNFSRSQEHIDMVYRRVNMNSDKLKRNITEEPTDDGAQGMKGSEEVQT
EDTVEVFVPPDQSTTVSTTPDVSTASQELDLHNVVPEQPVHQVIEFSITLMDYGYQEILR
DTDSPLYHDLSHHLQDQMQHAFADLPGFMDVIVLRISEAEAPKGAGGLSAVYAAVFETTV
PTIADVNLDIDTVVSSTGQSLKDMIVQALSKKASLLDLNSLTFETGKDQSSTRMPVPEVS
EDIITESFDEDVYGDLSFPTKGPKVEVHISSGSDENVLETIIDPTLDTDSTTTTKSEPET
IEPESDAVIIHQIETIKGETGELITENLQVPPVEEDRKPVVVADKENSLSSTSSSETSIL
PSEEQQRNLQKPTENPTADSDLKLNTIPEDEIIFKPVTTVNILFTTATTVSPRSEQPKLA
VTTDFSITLQPSTEPIGPITEVTDSNEIPEVPQPVDPGIVGKEEDKVVTAEPDEETKTEV
NLSNVKFVTTETVEVAGPENDTDVTEDTVSLEDQVLRPEEVTIVTETAEYGTVEPVGTVV
LPEPEDETGKLTKQDEVAEPEEKVLEQESEDIIESKDVREHKSDEEIKVKHEDDVQATKK
PGTETVQPKDEEGEVVEPEREADESEPADVVEYEGSVKTEQPTVEITSQVPKTTEGSDKP
PAEMIKIKPPEISVTETYLVENIDYYQPEEGHNLPFVPVDIVQLGIDIGNPEHVEDFGVE
DQLSKPEVIEGVLKIPDLVTEDTTTEPDVDIVFPAISTASESLPEKITESASDGDKDLPS
VVGDTVEPQLTQMEEDTLTEEQEETASQSMETLATDLPLTTTPADLDLIEVVLTDVSVVT
PTTLEKDYDSTTQKVQSTVVQDFPSTIGHTEEPQLTEMEDTLTEGALLKQEEATTTLPMK
TPAPKTTTPADLELLVLTDASVITPTFLEKDYDSPTETIQWTVGQDVNFTKTEMDKVLNL
GTEEVVQTNVSVITPTSLEKDYASTTQKVQSTVVPDIVFESENDKVPNLETENPFIHLKD
LDHIDVVSTETIDLLSYDNGYSFPNEGYPLETTKAPALKYFTTPSMTTASKGKELVVFFS
LRVTNMMFSEDLFNKSSAEYRSLENKFVELLLPYLQSNLTGFKKLEILNFRNGSVVVNSK
AKFAKSVPYNITQAVQDVLEEFCDAAAQHLDIKIDSHSLDIEPADQGDPCKFLACNEFSK
CVVNLRTKEAQCLCEPGYVTVDGLPCQSLCVVQPDFCLHGGECEIVPGHGAACRCPVGKF
WHFIGERCAELVSVTLDPFLSLVCLVGVLSSLYAIISLMLSMCRKCVRSRKTLTLVGRAQ
TTIPGLTS
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgaaatgtgggcatctcgtcacactcttcttccttattgtgtccgtcgcagga
attcaagaccgaagcagtctaaatccatcagagacccttcacactatcagcctgccaaac
cccccaaagcagaattcagggatgaggactagatttgaaatggaaaagcatcgcatcaag
aggtcagatttcttccactcagaggtgaaagtatgtccacaggagaccgtgagggaagtc
atagcaagccaccaaacatactacacactgagagtttgccaggaagctgtttgggaggct
ttccgaatctttctggacagaattcccagcagctcagagtaccagcaatgggtccacaaa
tgccagcatgactctatgtgcatctcagatctcgccatgaatttcagcagatcacaagaa
cacatagacatggtctacaggagggtgaatatgaatagtgacaaattaaaacgaaacata
actgaagagccaacagatgatggagcacaaggaatgaaaggttcagaggaagtccagact
gaagacacagtagaagtatttgttcccccagatcaatctactactgtcagcactacgcca
gacgtctctactgcctcacaggagttggatcttcacaatgtggttcctgagcagccagta
catcaggtcatcgagttcagcattacactgatggactatgggtatcaggagatactgaga
gacactgattcacctctgtatcatgacctgtcacaccatcttcaagatcagatgcaacac
gcttttgctgatctacctggattcatggatgtcatagtgttaagaattagtgaggcagaa
gcacctaaaggagctggaggactatctgcagtctacgcagctgtttttgagactactgta
cctaccattgctgatgtaaatctggacatcgacacggttgtttcatctacaggacaaagt
ctaaaggatatgatagttcaagcactgagcaaaaaggcatcacttcttgatcttaattca
ctgacatttgagacaggcaaagaccagtcttcaaccagaatgcctgtccctgaggtttct
gaagacattataactgagtcctttgatgaagatgtatatggtgacctcagttttccaaca
aaaggaccaaaggttgaagttcatatttcatctggtagcgatgagaatgttttggagacc
attatagacccaactttggacacagacagcaccacaacaacaaaatcagaaccagaaaca
attgaacctgagagtgatgcagttattatacaccagatcgaaactattaaaggggaaact
ggtgaactcataacagaaaatcttcaagttccaccagtagaggaagaccgtaaaccagtt
gttgttgctgataaagaaaacagtttgtcttcaacatcttcatctgaaacttcaatatta
ccaagtgaagaacagcagagaaacctacagaaacctacagagaatcctacagcagatagt
gacttaaaattaaacactataccagaagatgaaatcatatttaaaccagtaaccactgtc
aacattttgttcaccactgcaacaaccgttagtcctaggtctgaacaaccgaagttggct
gtcacaaccgactttagcatcaccctgcaaccttcaactgaaccaattggtccaataact
gaagtgacagattctaacgaaattccagaggtgcctcaaccagtggatcctggaatagta
ggaaaggaagaagacaaagtggtgacggctgaaccagacgaagagactaagactgaagtt
aatttatccaatgtaaagtttgtgacaacagagactgtagaagtagctggacctgaaaat
gatacagacgtaactgaagatactgtttcattagaagatcaggtattacgacctgaagaa
gtgacaatagtaacagaaactgctgagtatggcacagtagagcctgtgggaacggttgtg
ctaccagaaccagaggatgagactggaaaattaactaaacaggatgaagtagcagaacct
gaggaaaaggttttagagcaagaatcagaggacattatagaatcaaaagatgttcgggaa
cataaatctgatgaggagattaaagtgaaacatgaggatgatgttcaggcaaccaagaag
ccaggaactgagacagtacaacctaaggatgaagagggtgaggtggtggaacctgaaaga
gaagctgatgaatcagaaccagctgatgttgtagaatatgaaggcagcgtcaaaactgaa
cagcccactgtggagatcacaagtcaagttcccaaaactactgaaggttcagacaaacct
cctgcagagatgattaagattaaaccaccagagatttctgtaacagaaacttaccttgtg
gagaatattgactattaccagccagaagaaggtcataatttgccttttgtgccagttgac
attgttcaactaggcatagacattggtaaccctgaacatgtggaagactttggggttgag
gaccaactctccaaacctgaggttatcgaaggagtcctcaagataccagatctggttaca
gaggacaccaccacagaaccagatgtggatattgttttccctgctatatcaacggcctca
gaatctctacctgaaaagatcacagaatcagcttctgatggagataaggacctaccatcg
gttgtgggagatactgtggagccacagctcacacagatggaggaagacactctgacagaa
gaacaagaagagactgcttcacaatccatggagacacttgcaactgatctacctttgaca
actacacctgcagaccttgacctaattgaagtagtcctaacagatgtatcagtcgttaca
ccaacaaccttggaaaaggattatgattcaacaacacaaaaagtacaatcaactgttgtc
caggacttcccatctactattggacatacagaggaaccacagctcacagagatggaagac
actctgacagaaggtgcccttttaaaacaagaagaagcgactacaacactacccatgaag
acacctgcacctaagacaactacacctgcagatcttgaactgttagtcctaacagatgca
tcagtcattacaccaacatttttggaaaaggattatgattcgccaactgaaaccatacaa
tggactgttggccaggatgtaaattttacaaagacagaaatggacaaagtgctgaatctg
gggactgaggaagtagtccaaacaaatgtatcagtcattactccaacatctttggaaaag
gattatgcttcaacaactcaaaaagtacaatcgactgttgtcccggacattgtatttgag
tcagaaaatgacaaagtgccgaatctggaaactgaaaacccatttattcatttaaaagac
ttagaccatatagatgtagtaagtactgagaccattgatctcttgagttatgataatgga
tactcttttccaaatgaaggatatcccttagaaacaacaaaagcgccagcactgaagtat
ttcacaactccttcaatgactacagctagcaaaggcaaagaattagttgtgtttttcagt
ttgcgtgtcacaaacatgatgttttctgaagatcttttcaataagagctctgcagaatac
agatcactggaaaacaaatttgttgaactgctactcccatatctacagtctaacctaaca
ggctttaagaagttagagatcctaaacttcagaaacggaagtgtggtggtcaatagcaag
gcaaaatttgccaagtctgtgccgtacaacattactcaggctgtccaggatgtcttagaa
gagttttgtgatgctgcagcccaacatttggacataaagattgacagccattccctagac
atagaaccagctgatcaaggtgacccttgcaagtttcttgcctgcaacgagttttccaag
tgtgtggtgaacctcaggacaaaggaagcacaatgtttatgtgagccaggctacgtgaca
gtggatggactgccatgtcagagcctctgtgtggtccagccggacttctgtctccatgga
ggagagtgtgagattgtaccagggcatggtgctgcttgcagatgccctgtaggtaaattc
tggcattttatcggggagagatgtgcagagctggtctccgtgacactagacccctttctt
tccctagtgtgcctcgtgggggtgctcagctctctttatgccatcatttctctcatgtta
tctatgtgcaggaaatgtgtacggagcagaaagacactaactctagtaggcagagctcag
accaccataccaggcctgacgagttaa
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integrated database retrieval system
