Carassius auratus (goldfish): 113063787
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Entry
113063787 CDS
T07313
Name
(RefSeq) interferon regulatory factor 1-like isoform X1
KO
K09444
interferon regulatory factor 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
113063787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113063787
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
113063787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
113063787
NCBI-ProteinID:
XP_026089892
Ensembl:
ENSCARG00000065822
UniProt:
A0A6P6M1D7
LinkDB
All DBs
Position
46:156974..159461
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AA seq
284 aa
AA seq
DB search
MPVSRMRMRPWLEVKIDSNTIAGLRWVNKEEKMFSIPWKHAARHGWEVDKDACLFKQWAI
HTGKYKEGETQPDPKTWKANFRCAMNSLPDIEEVKDKSVNKGCGAVRVYRMLPAITKKKV
KRCKGLRKRKVKLEEMDAEEMQSEMTQENTIDSTVNLSTISTSNDTPAYEMEIPNCPEDL
YKFQVSPVHSTDLEENEAIFELTRQLERESTQWMQSNFVGKGFLGNEVATTESLSPESQW
SESSGEELEFRLYTELTPDLREDSLCTYTELWNSNSVPQTMCPL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtccagaatgcgcatgcgaccctggctggaggtgaagatcgactccaacacc
atcgctggactccgctgggtcaacaaggaggagaagatgttctccatcccgtggaagcac
gctgctcgccacggctgggaggtggacaaagacgcctgtctgttcaagcagtgggccatt
cacacaggtaaatacaaggagggagagacccagcccgaccccaagacctggaaagccaac
ttccgctgtgccatgaactctctccccgacatcgaagaggtgaaggacaagagcgtgaac
aaaggctgcggtgcggtgagagtctaccgcatgctgcccgccatcaccaagaagaaggtg
aagagatgcaagggcctacgcaaacgcaaggtcaagctggaggagatggacgctgaggag
atgcagtcagaaatgacccaggagaacaccatcgacagcactgtgaatctaagcaccatc
agcacctccaatgacacccccgcgtacgagatggagatcccaaactgtccagaagatctg
tacaagttccaggtgtctccggtgcactccacagacctggaggagaacgaagcaatcttt
gagctaacacggcaattggaacgtgaaagtacgcagtggatgcagagcaatttcgttgga
aaggggttcctgggcaatgaagtagccacaacagaatctctgagtccagagagccagtgg
agcgaaagctcaggagaagagctggagtttcggctctacactgaactgaccccagacctg
cgtgaagactctctctgcacctacacagagctgtggaacagcaacagcgtgccacagacc
atgtgtcctctctga
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