Carassius auratus (goldfish): 113063874
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Entry
113063874 CDS
T07313
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03440
Homologous recombination
caua03450
Non-homologous end-joining
caua04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113063874
03450 Non-homologous end-joining
113063874
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
113063874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caua03032
]
113063874
03400 DNA repair and recombination proteins [BR:
caua03400
]
113063874
DNA replication proteins [BR:
caua03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
113063874
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
113063874
BRCA1-C complex
113063874
NHEJ (non-homologous end-joining)
MRX complex
113063874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad50_zn_hook
SbcC_Walker_B
AAA_21
Motif
Other DBs
NCBI-GeneID:
113063874
NCBI-ProteinID:
XP_026090062
Ensembl:
ENSCARG00000035313
UniProt:
A0A6P6M1T8
LinkDB
All DBs
Position
46:complement(3455992..3479737)
Genome browser
AA seq
1066 aa
AA seq
DB search
MDSLENELESIESSLSKLMKLDNDIKALDSRKKQMEDDNRELEEKMERVFQGSDDQLQDM
YQNHQRTVKEKEHKLMECEREHEQACQECQRMNPIKSKLLFEQGCLQSEANIHTQNIEKR
DTQVKSLASSLELEGYDRTPLNERHLESFHRQVKERLDQDTEALNQTMHDMQQKEEQKQQ
SIDDLQDKKTGLERTIELKTDIQAKKQQELENIKSDLQRLEGSSSRLQELDTELQKAERE
LDNAVQSCMVDSLKAEVIELQKEKTKLDQAQRKLDQEMELLNIHTVARTQMEMLTKTKME
KEEQVKKIESTHNEELVSLLGHFPSKKELQDWIYSKTKEISSTRELLSETNKELASVEQK
KTNFTAEIKHKEEQLVSYEERLFNVCGSQDFESDLNKLKDELEKCSKQRAMLVGETAIYS
QFISQLTEEGEPCCPVCQREFPSEAELQDVINDMQSKLRLISDKLKNTEHDLKRKEHRRE
EMVALKPIRQSIVKLQEKDLPELRNELQGVNRDIEKLKGDTEEQKTLLCTMMSEEETAKA
CLQDLLLMDRYQLDLKDVERKIAQHAAKLQGVDLSRTMQQVSQEKQETQHRLDTTCSKME
TKRKLIQDKQDQIQALRSSVNEIRGGKLQISSNMQKRQQLEEQCVAFTTEIQTLHRDIQD
AEEQASPLAAALEKLQHEKQDLAERKRQKQEEGQKKISAIKEKVQNLTLLENVITKYIED
GKDSNKEQKKNELQEVEKRLHEAEKQRDKISKDIGNIRQDIDTQKVQERWLQDNLTLRKR
VEELKEVSRKHEDLLKEKGNMQDLQMYNEEQEVKKQKLEDLKENHNVALGRQKGYEGEIL
CFHKELSEDQYCRADDLYRDKMIVMRTTELANKDLDIYYKALDQTIMKFHSMKMKEINKI
IRDLWRSTYRGQDIEYVEIHSDVDENASAGLKRRTYNYRVVMVKGDTAFDMRGRCSAGQK
VLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQRNFQLLV
ITHDEDFVELLGRSNYVEYFYRIRKNRDQCSEITKCSINTLNSYLH
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggactcattggagaatgaattggaaagcatagagagcagcctcagcaaattgatgaag
ttggataatgacatcaaagctctggacagcaggaagaaacagatggaggatgataaccgg
gaactagaggaaaagatggagcgggtgtttcagggctcagatgatcagctgcaggacatg
tatcagaaccaccagaggactgtgaaggagaaggaacataaactaatggagtgcgagcgt
gagcatgaacaggcttgccaagagtgccagaggatgaatcccatcaaatctaaactacta
tttgagcaaggctgtctgcagtcggaggcgaatattcacacacaaaacattgaaaagagg
gacacccaggtcaagagtttagcatcttccctggagttggagggttatgaccggactcct
cttaatgagcgacacctcgagagcttccacagacaagtcaaagaaagactggaccaagac
acggaggcccttaaccaaactatgcatgatatgcagcagaaagaggaacagaagcagcaa
agcatcgatgatctccaagataagaagacaggtctagagagaaccattgagctgaagaca
gacatacaagccaagaaacaacaggaactggaaaacatcaagtctgacctccaaagactg
gagggctcttcaagcagactacaagagctagacactgaacttcagaaagcggagcgtgag
cttgataatgccgtgcagtcctgtatggtggacagtctaaaggcagaggtcattgaacta
cagaaggagaaaactaaactggatcaggcccagcgcaagttagaccaggagatggaattg
ctcaacatacacaccgtggcacgcacacagatggagatgctcacaaagaccaagatggaa
aaagaggagcaagtgaagaagatcgagtcgacacataatgaagagctggtgtctctgctg
ggacacttcccaagcaagaaagagctacaagactggatctactccaaaaccaaagagatc
agctccaccagagaactgctcagcgaaacgaataaggaacttgcatcagtagaacagaag
aagacaaactttactgcagaaatcaaacacaaggaagagcagttggtcagttatgaagag
agactttttaatgtgtgtggcagtcaggactttgaatcggacttgaacaagctgaaggat
gagttggagaagtgttcaaaacagagagccatgctggtgggggagacagccatctacagt
cagttcatcagtcagctgacggaggaaggcgagccctgctgtcccgtatgtcagcgtgag
ttcccatcagaggcagagctccaggacgtcattaatgacatgcagtccaagctgcggctc
atctcggacaaactaaagaacactgagcatgacctgaagaggaaggagcataggcgtgaa
gaaatggtcgcactgaagccaatcaggcagtctatagtgaagctccaggagaaagatctg
ccagagctcagaaatgaactccagggtgtgaatcgagacattgagaagctgaaaggtgac
actgaggagcagaaaacattgctctgcacaatgatgtctgaggaagaaacagccaaagcc
tgtctgcaggacctattactcatggatcgctatcagcttgacctgaaggatgtagagagg
aagatcgctcagcatgcagccaagttgcagggagttgacctcagtcgtacaatgcagcag
gtcagccaggagaaacaagagacccaacaccgcctggacacaacctgcagtaagatggag
acgaagaggaaactgatccaggacaaacaggatcagatccaggccttgaggagcagcgta
aatgagattcgtggaggaaagctccagatctccagcaatatgcagaaacgtcaacagttg
gaggagcagtgtgtggcgttcaccactgagatccaaacactccacagagacattcaagat
gcagaggagcaggcgtctcctctagctgctgctctggagaagctccagcatgaaaaacag
gaccttgctgagcgcaagaggcagaaacaggaggaaggacagaaaaagatcagtgcaatc
aaggaaaaagtacaaaatctgacccttcttgaaaatgtgattaccaagtacatagaagac
ggcaaagacagcaacaaagagcaaaaaaaaaatgagctacaagaggtagaaaaacgacta
catgaggctgagaaacagcgagacaagatcagtaaagacatcggcaacattcgccaagat
attgacactcagaaggttcaagagcgctggctacaggacaacttgaccttacggaagcgt
gtggaggagctaaaagaagtgtccaggaaacatgaagacttacttaaagagaaaggcaac
atgcaagatctgcaaatgtacaatgaggagcaagaagtaaaaaagcaaaagttggaggac
ctgaaagagaaccacaatgtggcacttggtcgtcagaaaggctacgagggcgagatcctc
tgttttcataaagagctcagtgaggaccagtattgccgggccgatgatctctacagagac
aaaatgattgtgatgagaacaacagagttggccaataaggacctggacatctactataaa
gccctagaccaaacgataatgaagtttcacagcatgaagatgaaggaaattaataaaatc
atcagagatttatggcggagcacgtacagaggacaagacatcgagtatgtggagatacac
tctgatgtggatgaaaacgcctccgctggcctgaaaagaaggacctataactatagagtg
gtaatggtcaaaggagacaccgcttttgacatgcgtggacgttgcagtgctggacaaaag
gttctggcctctctcatcatacggttggctctggctgagacgttctgtctgaactgtggg
attctggcactggatgagccaactaccaacctagacagagagaatatagagtctttggca
cacgcactggtggagataattaagagtcgttctcagcagcgtaacttccagcttcttgtt
atcacccacgatgaggatttcgtggagctcctgggacgatccaactatgtggagtatttc
tacaggatccggaagaaccgggaccagtgttcagagatcacaaagtgtagcatcaacact
ctcaactcctacctgcactga
DBGET
integrated database retrieval system
