Carassius auratus (goldfish): 113063999
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Entry
113063999 CDS
T07313
Name
(RefSeq) CCR4-NOT transcription complex subunit 6
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113063999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113063999
Enzymes [BR:
caua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
113063999
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113063999
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113063999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
113063999
NCBI-ProteinID:
XP_026090265
Ensembl:
ENSCARG00000061491
UniProt:
A0A6P6M0K5
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All DBs
Position
46:6458057..6471530
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AA seq
554 aa
AA seq
DB search
MPKEKYDPPDPRRMYTIMSSEEAANGKKSYWAELEIVGRVRSLSSALWSLTHLTALHISD
NSLSRIPPDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELLLNNNQLRVLPFELGKLF
QLQTLGLKGNPLAQEILNLYQEPDGTRRLLSYLLDNLAGTKREQPPPRSWIPLQEPDRTR
PAALFSVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKSIMQEILSCSADIISLQEVETE
QYYSYFLVELKEHGYEGFFSPKSRARTMSESDRKHVDGCAIFYKTEKFSLVQKHTVEFNQ
LAMANSEGSEAMLNRVMTKDNIGVAVLLELRKEIMEQSAGKPLHGMEKQLLLVANAHMHW
DPEYSDVKLVQTMMFLSEVKNIVDKATRSLKLSSISGETNAIPLVLCADLNSLPDSGVVE
YLSTGGVDSTHKDFKDLRYIDSLTNFNCNGKNGTSSTRITHGFKLKSAYENGLMPFTNYT
YDFKGIIDYIFYSQPLLNVLGILGPLDLHWLHENNIDGCPHPHVPSDHFSLFAQLELLLP
YPPAVNGIHLPGRR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggaaaaatatgatccgcctgacccaagaaggatgtacacaataatgtccagt
gaggaggcggccaacgggaagaagtcatactgggcagagctggagattgttggaagagtg
aggagtttgagttcagcattatggtcccttacccatctcactgctcttcatatcagtgat
aactcactttcgcgaatcccgcccgacattgccaaactacacaacttggtgtacctggac
ctctcgtccaataaaatcaggagcctgcccgccgagctaggcaacatggtatctctcagg
gaactgcttttaaataacaaccagttacgagttctgccttttgagcttggaaaactcttt
cagttacaaacgttgggtttgaaagggaacccacttgcacaagaaatcttgaacctctac
caagagcctgatgggacacgtcggctcctcagctacctgctggacaatctcgcaggcacc
aaacgtgaacagccaccacctcgctcatggataccattgcaggagcctgaccggacacgg
ccagcagcacttttctctgtaatgtgctacaacgtgctgtgtgataagtacgccacacgt
cagctctacggctactgtccctcctgggccctcaactgggaatacaggaagaagtccatc
atgcaggagatcctcagctgcagcgcagacatcatcagcctgcaggaagtggagacggag
cagtactatagctatttcctggtggagctgaaggaacatggttacgaaggattcttcagc
ccgaagtcccgggccaggactatgtcagaatcggaccgcaaacatgttgacggctgcgcc
attttctataaaacggagaagttcagtctggtgcagaagcacacagtggagttcaaccag
ctggctatggcaaattctgaaggttcagaggccatgttgaacagggtgatgaccaaggac
aacatcggagtggctgtactactagagctgcggaaagagatcatggagcagtctgctgga
aagcctctgcatggcatggagaaacagctcctccttgtggccaatgctcacatgcactgg
gaccccgagtactcggatgtgaagcttgtccagaccatgatgtttctgtctgaagtgaag
aacattgtggacaaagccactcgcagtctcaagctctcctccatctcaggagaaaccaat
gctatccctctcgtcctgtgtgctgacctcaactctctgcctgactcgggtgtggtggag
tacctgagcacaggtggtgtggacagcacccacaaggacttcaaagacctgcgatatatt
gacagcttgaccaactttaactgcaacggcaagaacggcacctccagcaccaggatcaca
cacggcttcaagctgaagagtgcttacgagaacggcctgatgcctttcaccaactacacc
tatgactttaagggcatcattgactacatcttctactctcaacctttgcttaatgtgctg
ggcattttgggtcccttggacctccactggctccacgagaacaatatcgatggctgcccc
catccccacgtcccctctgatcacttctctctgtttgcacaactggagctgctcctgccc
tatccgcctgctgtcaatggcattcatctgccgggtcgcaggtag
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