Carassius auratus (goldfish): 113064008
Help
Entry
113064008 CDS
T07313
Name
(RefSeq) collagen alpha-1(XXIII) chain-like isoform X1
KO
K24355
collagen type XXIII alpha
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113064008
Glycosaminoglycan binding proteins [BR:
caua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113064008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
113064008
NCBI-ProteinID:
XP_026090280
UniProt:
A0A6P6M0M0
LinkDB
All DBs
Position
46:6690878..6792249
Genome browser
AA seq
585 aa
AA seq
DB search
MPKMVSSGDSKDVSKSSQSNGHHTSHIFHCFTTLVCFMLSASSVAVCLFMNVKTSHLERK
MEILEMERLSVMEPVHATLDANATLRDAIEKLVQERLKEGVSKIRTAREAAQECSCPPGP
PGKRGRKGNPGIPGTPGRDGYPGPMGMDGKPGPPGPNGSQGMPGPKGEKGDQGDMGPRGP
PAYTASAGLLSNQILTVKGDQGQAGPPGPPGPPGTPGPRGPPGNTGRDGPQGHPGEPGAP
GKDGNEGPRGPPGMQGMNGVNGIPGPQGPVGQKGDKGTPGTEGKRGIDGSPGMKGEKGDV
GDPGPQGLSGEKGATGFIENADLAVRLKSLQGPPGPPGEQGPKGEMGLPGAPGPEGKQGH
KGERGDAGEPGAAGARGEKGEIGLTGPSGEAGRKGDKGDSRLEDSLAQIISMPGPPGPPG
PPGPAGYHGLPGPKGDPGESVKGEKGDAGERGPLGQRGLQGFPGSNGLVGLPGAKGDKGK
QGEPGLDGFPGFQGEKGDRGDKGEKGERGSIGKKGLKGQKGEQGPPGLDQPCPVDTSWFR
EHGGEARAPSDAPCPLVQYFFSCVPSSFRYFHPGAWGSLVHTHEI
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaatggtttcatctggggattcaaaagacgtgtcaaagtcatcacagagcaat
ggacatcacacatcacacatatttcattgttttacgaccctcgtatgtttcatgttgtct
gcgtcttcggtggcagtttgtctgtttatgaacgtcaaaacatctcatcttgagcgtaaa
atggagattctggagatggagcgactgtctgtgatggaacctgtgcacgcgaccctggat
gcgaacgcgacccttcgggatgcgatagagaaacttgtgcaagagagactcaaagagggg
gtgtcgaaaattcgcacagctcgagaagcagcgcaagagtgctcgtgtcctccaggtcct
ccgggaaaacggggaagaaaaggcaaccctggaattccaggcactccaggacgagatggc
tacccgggtccaatgggtatggatggtaaacctggacctccaggtccaaatggcagccag
ggaatgccgggaccgaaaggagagaagggtgaccagggagacatgggtcccaggggacca
ccggcctacactgcctctgcaggcctgctcagtaatcagattctcacggttaagggtgat
caaggtcaggctggacccccaggtcccccaggacctccaggaacacctggtcccagaggg
cctccaggaaacaccggcagagatgggccgcagggccacccaggagaaccaggtgctcct
ggaaaagatggaaatgagggaccaagagggccaccaggcatgcagggtatgaatggtgtc
aatggaatacctggcccacaaggccctgtagggcaaaagggggataagggcaccccaggt
actgaagggaagagagggattgatggatcccctggcatgaagggtgaaaagggagatgtt
ggagatccaggaccccagggtttgtctggagagaaaggagctactggcttcatagagaat
gctgatctggctgttagactaaaatctctacaggggcctccaggccctccaggggagcaa
gggccaaaaggagaaatgggcttacctggagcaccaggacctgaaggaaagcagggccat
aagggagagagaggtgatgcaggagagcctggagcagcaggagccagaggggaaaagggt
gaaattgggctaacagggccttcaggggaagcagggcgaaagggagataaaggagactct
aggcttgaggacagtctggcccaaattatctctatgcctggcccaccagggccacctgga
ccccctgggcctgccggatatcatggattgcctggacccaagggagatcctggtgagtca
gttaaaggagaaaagggtgatgctggagagagaggtccacttgggcagcggggtcttcaa
ggctttccagggtctaatggcttggtaggcctgccaggtgcaaaaggtgataaggggaag
caaggtgaaccaggtttagatggtttcccagggtttcaaggagaaaagggcgacagagga
gacaaaggggagaagggtgaaagaggctcaataggaaaaaagggtctgaaaggacagaag
ggagagcagggacctccagggcttgatcagccttgtcctgtggacaccagttggtttaga
gaacatggtggggaggcaagggctccatcagatgccccctgccctttggtacagtatttt
ttttcatgtgtgccctcatcatttcgatatttccatcctggtgcttggggttcccttgtc
cacacccatgagatctga
DBGET
integrated database retrieval system
