Carassius auratus (goldfish): 113064033
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Entry
113064033 CDS
T07313
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113064033
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113064033
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
HFX_2341_N
Motif
Other DBs
NCBI-GeneID:
113064033
NCBI-ProteinID:
XP_026090333
UniProt:
A0A6P6M0U3
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All DBs
Position
46:complement(7968837..7976645)
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AA seq
1041 aa
AA seq
DB search
MMENLTPEQWREIVNKKFRFPPELLGAIREGNVNMVYSLLRTGDGIIRQLDDSEDRLWRE
ALNLSIRLGNEDTMDTLLQGVKFDFRKIHEALLVAVDTNQPRVVKRLLDQLDLEKGNKMD
VRSFSMAIFDHSIDDSQFAPGVTPLTLACQKDLYDIVTMLNQKGHEIPWPHKISCICLEC
TNGRQYDLLKFSLSRINTYRGIASRAYLSITADDAMLSAFRLSRDLRKLSKKEPEFKPQY
LALEQLCQEFAVELLGMCRNQSEVTTILNSLVDQDGDSEDEFDQQAFEEGIPNLARLRLA
VNYNQKQFVAHPICQQVLSSIWCGKLSGWRGSRTAWKLLVSFGIFLTMPVLCLIYWIAPK
SKLGKILKIPVIKFLLHSASYMWFLITLLGESIAMEVYRDSFASREQTILHNSFHMIWVV
GFFWFECKEIWIEGLRSYFLDWWNCLDVMVLSMYLASFALRVVIMLKVHFLCQTPDKQDE
CVYFTETLRDEWHQEDPQFIAEVLFAVTSMLSFTRLAYILPADESLGTLQISIGKMIDDM
MRFMFILVIIGTAFLCGINNIYVPYMITPNLGRLNETFSFLFWTMFGMADQTYVDMPEFV
LAEFVGRILYGIYTLIIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGL
TMPVPFNIIPSPKALFYLLRGIFRRICCCCFNCNSAPDYPPLTSMDDVGPAENRIPYRQQ
VIRALVQRYIESARREFEETKRKDVGNRITELSKVIGQLHAEMKQIQTNVFDYSDNTKGD
PSGGSSFLGKYILGAKNNFRGFNSNERKTVPLHEPLHHEQPALGTAEEKEEETADMQESP
AADTESDRKSNEEQNGEGETDNAVEHMNETDGGGDEGDMETGNNDVTDISMEAGAEKNTE
NTSETVIDIEANTDAESEARAKREDEMMVEEETSDNEEELNEEATGGKDLDEAETEKNIE
VEESNEMTEDVVEVINENAGEGIKINLSQTSLVSFLAKRIEEKLERNFTFIGNQVSSPTG
SDDSQDTGFGSQVFDLSTSSP
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaacctcacgccagaacaatggcgcgagatcgtgaacaagaagtttcgcttc
cctccggagctcctgggggccatccgagagggcaacgtgaacatggtctattctctgctg
aggacgggtgacgggatcatccgccagctggacgactctgaggacaggctatggagagaa
gcgctgaacctgtccatccgactgggcaacgaggacaccatggacacccttctccaagga
gtcaagtttgacttccggaagatccacgaagctcttcttgtggctgtggacaccaaccag
cctcgtgtggtcaagcgcctcctggaccagcttgatctggagaagggaaacaagatggat
gtgcgctcattctcaatggccatttttgaccactccattgacgattctcagtttgcccct
ggagtgacacctttgacactggcctgtcagaaggatctgtatgacattgtgacgatgctc
aatcagaaaggtcacgaaattccttggccgcataaaatctcatgcatatgtctggagtgc
acaaatggacgccaatatgatttgctcaagttctcgctgtctcgtatcaacacctaccga
ggtatcgccagccgtgcctacctgtccatcaccgcagatgatgccatgctcagtgccttt
cgactcagccgggatctccgcaagctgtcaaaaaaggaacctgaattcaagcctcagtat
ctcgccctggagcagctgtgccaggagtttgccgtggagctgcttggaatgtgccggaac
caaagtgaggtcaccaccatcctaaacagtcttgtggatcaggatggagacagcgaggac
gagtttgaccagcaggcgttcgaggagggcattccaaacctagctcgcctaaggcttgcc
gtcaactataatcaaaaacaatttgtagcccacccgatctgccagcaggtgctttcctcc
atctggtgtgggaaactatcaggctggaggggcagcagaacagcctggaagctcttggtg
tcgtttgggatcttcctgaccatgcccgtcctttgcctcatctactggatcgcaccaaag
tcaaagttggggaagattctgaagatcccagtgattaaattccttctccattcggcatca
tatatgtggttcctgatcacgcttctgggggaatctattgccatggaggtgtaccgggac
agctttgcctctcgtgagcagaccatcctgcacaactccttccacatgatctgggtggtt
ggttttttctggttcgagtgtaaggaaatttggatcgagggcttgaggagttatttccta
gactggtggaactgtctggatgtgatggttctcagcatgtacctggcgtcattcgccctg
agagtggtcatcatgctcaaggtccatttcctctgccagacacctgacaaacaggatgag
tgtgtctacttcaccgagactttgcgtgatgagtggcatcaggaggatccccagttcatc
gctgaggtgctgtttgcagtgaccagcatgctgagtttcactcgcctggcctacatcctt
ccagcagacgagtctcttggcaccctgcagatctccattggaaagatgattgacgacatg
atgagatttatgttcattttggtgatcattggaactgccttcctgtgtggcatcaacaat
atctatgtcccatatatgattacgccaaatcttggaaggttaaatgaaaccttcagcttc
ctcttctggaccatgtttgggatggccgaccagacctatgtggacatgccggagtttgtt
ttggcagagtttgttggcagaatcctttatggcatctacacgctgatcattgtcattgta
cttctaaacatgctcatcgctatgatcaccaactcttttcagaagattgaggatgatgct
gatgtagagtggaaatttgcccgttcaaagctctacctgagttatttcagagaaggactg
actatgcctgtccctttcaacatcatcccctctccaaaggcccttttctatcttttaaga
ggaattttcagacggatctgctgttgctgcttcaactgtaactctgctccagactaccct
ccacttacatctatggatgacgtgggtccagcggagaaccgtattccctatagacagcag
gtcatccgcgcgctggttcagcgctacatcgaatctgccaggagagagtttgaagagacg
aagcgcaaagacgttgggaaccggatcacagagctgagcaaagtgattggccagctacat
gctgaaatgaaacagattcaaacgaacgtgtttgactactcggacaacaccaagggagat
ccgtcaggaggatcttctttcctggggaagtacatccttggagccaaaaacaacttcagg
ggcttcaacagcaacgagagaaagactgttccattacatgagcctttacaccatgaacaa
ccagcactggggactgcagaagagaaggaggaagagactgcagacatgcaggagtcaccg
gccgctgatacggagtcagacaggaaatcaaatgaagagcaaaacggcgagggagaaaca
gataatgctgtggaacacatgaatgagacagatgggggaggagatgagggggacatggag
acggggaataatgatgtcactgatattagcatggaggctggtgctgaaaagaatacagag
aatacaagtgagacagtcatagatatagaggccaatacagatgctgaaagtgaagctaga
gcaaaaagagaagatgagatgatggtggaggaggaaaccagtgataatgaggaggaatta
aatgaagaggccacaggaggaaaagatctagatgaagcagagacggagaaaaacatagag
gttgaggaaagtaatgaaatgacagaagatgtagttgaagtcatcaatgaaaatgcagga
gagggcatcaagataaacctgagtcagacgagcctagtgagtttcttagcaaagaggata
gaggaaaagctagagaggaattttactttcattggaaaccaagtatcatcaccaactggc
agcgatgactcccaagacaccggttttggttctcaagtatttgacctctcaactagcagt
ccttaa
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