Carassius auratus (goldfish): 113064120
Help
Entry
113064120 CDS
T07313
Name
(RefSeq) whirlin-like
KO
K21879
whirlin
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
caua03037
]
113064120
Cilium and associated proteins [BR:
caua03037
]
Primary cilia and associated proteins
USH complex and associated proteins
113064120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
USH1C_N
PAH_ZNF598
C2H2_ASCIZ
Motif
Other DBs
NCBI-GeneID:
113064120
NCBI-ProteinID:
XP_026090490
Ensembl:
ENSCARG00000067320
UniProt:
A0A6P6M167
LinkDB
All DBs
Position
46:10146940..10217460
Genome browser
AA seq
939 aa
AA seq
DB search
MSTDLELLSLNSSSGNSVASSAYTLSANVKKLHNALNLLLSDIEREQFIHCLNVYHSKRN
VYDLVQTLKVILNVPSKRQLLPMLRLVIPRSDQLLFDQYTSEGLYMKSDVLARNGDPDGF
YEAVNSSPTHGAHFSASSASQAAMRGSPDNISTSSDGTATLIPLLGRNFLPEPPGEIRQV
TLKRHKSNEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRIGDQIMKVNDKVFDRVTH
AEAVKVLKGSKKLSMSVRSVGRIPGGYVTNHVYTWVDPQGRSVSPPPELLVEHQSATLRR
SNSQGRSHMQFLQDGDEKKVNLVLDDGRSLGLMIRGGAEYSLGIYITGVDRGSAAECGGL
KVGDQILEVNGRSFLSIPHDEAVQVLKSTQHLMMTVKDVGRLPHARTVVGETKWITSSQI
TDSSASSSVTGLSLDQGASASGKSGFYKGVAGSQVTLSSLVNQSRAMLEEQARHLLTEPE
RQTMGYYIQEYRDGHIGVDQLVMALFELFNTHAKFSLLSEVRGLVAPHDVERFDGLVLRR
EIEALKARQGGGAGFQDSFSMVSYPDTLASSSASFMTNTTLSSARNDDVAENNGEQSLGR
SNALPDISLDEVHSTSDSPPSFKPPPPPGLQRRPGRKATLSKRPSSSSSQSGLYFTAPSC
SQSKEPKHPKAPKPQTSPLETLKIDVPAPQLSVVSQHTIGPFPRVQSPSKAKPAAVQSSS
PIPPPAPNVPAPPGPPPPPLPAPVPDKPAPSSPASNQHFVMVEVHRPNAEPDVNEVRPLP
QARGGTLSQLSDSGQTLSEDSGVDIAESGRLSKDSSPRPARTRAPRDGHGGGETSAKPPG
LLEPTSTLVRVAKSASTLGIAIEGGANTRQPLPRIVTVQRGGSAHNCGQLKVGQVILEVN
GVSLRGKEHREAARLIAEAFKTKEKDYIDFLITEFNVAL
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagacctggagctcctgtcgcttaactcttcctcgggaaactctgtggcgtct
agcgcgtataccctttccgccaacgtgaaaaagcttcacaacgcgctcaacctgctgctc
agcgacatagagagagagcagttcatccactgcctcaacgtgtaccactccaagcgcaat
gtgtacgatctggtccagacgcttaaagtcatactaaatgtcccgagtaagcgtcaactc
cttcccatgctgcgcctggttatcccgcgctcggatcagcttctgttcgatcagtacaca
tcagaggggctgtacatgaaatccgacgttcttgcgcgcaatggtgacccagacggcttc
tacgaggctgttaattcgagtccaacacacggggctcacttctcggcttcgtccgcgtct
caagccgctatgcgcgggtctcctgataatatcagcaccagcagcgatgggacagcgact
cttattcctttacttggaaggaatttcttaccggagccgccaggagagatccgacaggtg
accctcaagcgtcacaagagcaacgagggtttgggatttagcatccgcggaggatccgag
catggagttgggatatatgtgtcactggtggaaccgggatcactggctgaaaaggagggt
ttgagaataggagatcagataatgaaagttaatgacaaagtgttcgaccgagtcacgcat
gcagaggcagttaaggtgctgaagggcagcaaaaagctctccatgtctgtgcgttctgtg
ggccgtattccaggcggttatgtcacaaatcatgtctacacctgggtggatccgcagggg
cgcagcgtgtccccaccccctgaactactggtggagcatcaaagcgccaccctgcgcagg
tccaacagtcagggccgcagccacatgcagtttctgcaggacggcgatgagaagaaggta
aatttggttctggatgacggccgttctctgggtctcatgatccgtggaggggctgaatac
tctttaggtatctacatcacaggtgtggaccgagggtctgcagcagagtgtggaggactg
aaggtcggggatcagattctggaggtcaatggacgaagtttcctcagcatcccacacgat
gaggctgtacaagtgctgaagtctacacagcacctgatgatgacggtgaaggatgtcggg
cgactgccacatgcccgcaccgtagtgggcgagacaaagtggatcacaagctcacagatt
acagacagctcggccagcagcagtgtcacaggactctctctggaccagggagcatcagca
tcaggaaagagtggcttttataaaggtgtggcgggatctcaggtgactctgtccagtttg
gtgaaccagagcagggccatgctggaggagcaggccagacatctgctgaccgaaccggag
aggcagaccatgggttactacatccaagagtaccgtgatggtcacatcggtgttgaccag
ctggtcatggccctctttgagctgttcaatacacatgccaagttttctctgctgtcagag
gtgagggggctcgtggcccctcatgatgtggagagatttgacggcctggttctgagacga
gagatcgaggccctgaaagcgaggcaaggtggcggagctgggtttcaagactccttctct
atggtttcttaccctgacacactggcctcctcctcagccagcttcatgaccaacaccacc
ctcagctccgcacggaatgatgatgttgcagagaacaatggggaacagtctctcgggcgt
agcaatgcccttccagacatctctctggatgaggttcattccacctcagattcccctcct
tcctttaaacctcctcctcccccagggcttcagcgccggcccggtcgaaaagccacgctt
agcaaacgtccctcttctagctcctcccaatcaggcttgtacttcaccgccccttcttgt
tcccagagcaaagaacccaaacacccaaaagcacccaaacctcaaacatctcctcttgag
accctcaaaatagatgtccctgcacctcaactttcagtcgtgagtcagcatactatcgga
ccgttcccccgggtccagtctcctagtaaggcgaagcctgctgctgtccaatcctcatct
ccgattcctccacccgcccctaatgtacctgcgccacctgggccgccgcctcctcctctt
ccggcccccgtcccagataagcccgccccttcttccccagcatccaatcagcattttgtc
atggtggaggtgcacagacccaacgcagagcctgatgtgaacgaggtgcggccgctgcca
caagctcgaggagggacattatctcagctgtcagacagcggacaaaccctcagcgaggac
agtggtgtggacattgccgaatctggacgtctcagtaaggatagcagcccacgtcctgcc
cgcaccagagccccacgggatgggcacggaggaggagaaacatctgccaaaccgccgggt
ctgttggagcctacatccactctagtgagagtggcaaaaagcgccagtactctgggcatc
gcaatagaaggaggggcaaacacacgtcagcccctcccacgcatcgttaccgtacagaga
ggtggttcggctcataactgtggacagttgaaggtgggtcaagtgatccttgaggtaaat
ggagtgtctctcagaggaaaggagcatcgggaagccgcacgtctcatcgcagaggccttt
aaaaccaaagagaaggactacattgacttcttgatcacagagttcaatgttgctctataa
DBGET
integrated database retrieval system