KEGG   Carassius auratus (goldfish): 113064137
Entry
113064137         CDS       T07313                                 
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113064137
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caua03019]
    113064137
   03041 Spliceosome [BR:caua03041]
    113064137
   03032 DNA replication proteins [BR:caua03032]
    113064137
Messenger RNA biogenesis [BR:caua03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     113064137
Spliceosome [BR:caua03041]
 Complex A
  U1 snRNP components
   Sm proteins
    113064137
  U2 snRNP components
    113064137
 Complex B
  U1 snRNP components
    113064137
  U4/U6.U5 tri-snRNP components
    113064137
 Complex C
  U2 snRNP components
    113064137
DNA replication proteins [BR:caua03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     113064137
SSDB
Motif
Pfam: LSM TSP9 ATP-grasp_2
Other DBs
NCBI-GeneID: 113064137
NCBI-ProteinID: XP_026090512
Ensembl: ENSCARG00000069191
UniProt: A0A6P6J023
LinkDB
Position
46:complement(10479171..10480942)
AA seq 128 aa
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVSQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGAGAGRGKAAILKAQVAARGRGRGGPGGR
GNIFQKRR
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtctattggtgttcccatcaaagtcctgcatgaagcagagggtcacatcgtgacctgt
gagacaaacacaggcgaggtgtacagaggcaagctgatcgaagcagaggataacatgaac
tgccagatgtccaacattacagtgacctatagagacggcagagtgtcacagctggagcag
gtgtacattcgcggcagcaaaatacgcttcctcattctgccagacatgttgaaaaacgcc
cctatgttgaagagcatgaaaaacaaaaaccaaggtgcaggagctggaagaggcaaagct
gctattctcaaagctcaagtcgcagcgaggggcagaggtcgaggaggaccaggaggaagg
ggaaatattttccagaaaagacgataa

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