KEGG   Carassius auratus (goldfish): 113064153
Entry
113064153         CDS       T07313                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1-like
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113064153
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:caua03041]
    113064153
   04121 Ubiquitin system [BR:caua04121]
    113064153
Spliceosome [BR:caua03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    113064153
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    113064153
Ubiquitin system [BR:caua04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    113064153
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 113064153
NCBI-ProteinID: XP_026090549
Ensembl: ENSCARG00000069480
UniProt: A0A6P6M1L9
LinkDB
Position
46:10807522..10814678
AA seq 772 aa
MGSSKKHKEKEKDRDPEDRHREHKKHRHKEKDREREKRKRSRSRERSSRGTERDRSGRAE
RSHAEPRVKKEKPDTAFEDNSEPGPKSASGDASLSIEETNKLRAKLGLKPLELNENKKET
GTKEEPLLAEAINPVHIKQQAEMREKLAALKEKRLLNQKLGKVKVLGDEEPWLDDTVAWV
ERSRKLAKEKEMAEKRAKLLEEMDEEFGVSNLVEEEFAQEKRHAYSSRDLKGLKVQHKME
SFKEGETIILTIEDKGVLEEEEDVLVNVGLVDKEKAEKNVELKKKKPDYKPYEEEESVDD
MVTFKPKSVLSKYDEEIEGEKKKSFRLSAGGFVGGERERELQAIRENLRSQAQSLDMPVL
TIASEYYTPHEMVGFKKTKCKVKKIRKKEKVLKIDELIVDDTRSTDFGSRSRGRGRKQAD
EEGVEHGGVAKETSSKVSDVLQQSDDIRMADMDISDDDDFTPPEPSALEEDEAEQELQKQ
LEKQRKLRQKQMLKDSGEKVAEQMTQLVNLQDDENDPDRKNNIVFNATSEFCRTLGDIPT
YGLSGNREDQEDIMDFEKDAEKEGGGQSDSDMDDNVGWSTVNLDEEKGQADISMASTTIL
DEEPIVNSGLAAALLLCKNKGLLDTQMLKVARVKAPKGALPNDNYAIEDKMNIDDKYSRR
EEYRGFTQDFKEKDNYKPDIKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMK
KLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANNITK
NT seq 2319 nt   +upstreamnt  +downstreamnt
atgggttcatcgaagaaacacaaagagaaggagaaagatcgggatccagaggacaggcac
cgtgagcacaagaaacaccgtcacaaggagaaggaccgcgagcgagagaagagaaagaga
tcccgctccagagagaggagcagccggggaacagagagagacaggagcggtagagcagag
aggagccatgcggagccaagagtcaagaaagagaagcctgacactgctttcgaggacaac
agcgagccagggcccaaatctgcaagcggtgatgcttcgctcagcattgaagagaccaat
aaactgagagccaaactaggtttgaaaccacttgaactcaatgaaaacaagaaagagact
ggaacgaaggaggagcccctcctggccgaggccatcaatcctgtccacatcaaacaacaa
gccgagatgagagagaaactggctgcgctcaaagagaagcgtctgctcaatcagaaactg
gggaaggttaaggtgcttggagatgaagaaccatggctggacgacacagttgcttgggtg
gagaggagtcgcaaacttgccaaagagaaggagatggcagagaagagggccaagctccta
gaagagatggatgaagagtttggtgtgagcaatctggtagaggaggagtttgcacaagaa
aaaaggcacgcatatagctcacgggatctcaaaggactaaaggttcaacacaagatggag
tctttcaaagagggggaaacaattatcttaactattgaagacaaaggcgttctggaggag
gaagaggacgtgctggtgaatgtgggtctggtggacaaagagaaagcagagaaaaacgtg
gagctaaagaagaagaagcccgattataaaccttatgaagaagaagagagtgtggatgac
atggtcactttcaagccaaagtctgtgctgtccaagtacgatgaggagatcgagggggag
aagaagaagagtttcaggctcagtgctggaggttttgtggggggtgagagagagcgggag
ctgcaggccatcagagagaacctgcgcagtcaggcccagtctctggacatgcctgttctg
accatcgccagtgaatactacacgccacacgagatggtgggctttaagaagaccaaatgc
aaagtcaagaaaatcagaaagaaagagaaagtactcaagattgatgaactcattgtggat
gacactcgaagcacagattttggttccaggtctcgaggccgaggtagaaagcaagccgat
gaggagggggtggagcatggaggtgttgctaaagaaaccagcagcaaggtcagtgatgtc
ctccagcagtcagatgacatcagaatggccgacatggacattagtgatgatgatgatttc
acccctccagagccttctgcattagaagaggatgaagctgagcaggagctccagaaacag
cttgagaaacagaggaaactcagacaaaaacagatgctgaaagactcaggagaaaaggtg
gctgagcaaatgactcagttggtgaatttgcaagatgatgaaaatgacccagacagaaag
aataacattgtctttaatgcaacctctgaattttgccgcactcttggagacatcccgacc
tacgggctgtcaggaaaccgagaggaccaagaggatattatggactttgaaaaggatgct
gagaaagaaggaggcggacagtcagactctgatatggatgacaacgtgggctggagcacc
gtcaacctggatgaagagaaaggccaggcagatatctcaatggcttccactactattctg
gatgaagagcccattgtgaactctggtcttgctgccgctttacttctgtgcaaaaacaaa
ggactgctggacacacagatgctgaaggtggctcgtgtcaaagccccaaaaggagctctc
ccaaatgataactacgccatcgaagacaagatgaatattgatgataagtacagcaggagg
gaggaatacagaggcttcactcaggatttcaaagaaaaggataactacaagccagacatc
aagattgagtacgttgatgagtctggtcgcaagctcacccctaaagaggctttcagacag
ctgtcccatcgcttccatgggaagggctctggcaagatgaagaccgagcggaggatgaaa
aagcttgaggaagaagcgctgctgaagaagatgagcagcagtgacactcctctgggcacc
gtcgctcttctgcaggaaaagcagaagtcccagaaaactccttacatagtgctgagtggc
agtgggaagagcatgaatgcgaataacattacaaaataa

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