Carassius auratus (goldfish): 113064340
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Entry
113064340 CDS
T07313
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04120
Ubiquitin mediated proteolysis
caua04144
Endocytosis
caua04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113064340
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113064340
09144 Cellular community - eukaryotes
04530 Tight junction
113064340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113064340
04121 Ubiquitin system [BR:
caua04121
]
113064340
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
113064340
Membrane trafficking [BR:
caua04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
113064340
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
HECT type E3
113064340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
113064340
NCBI-ProteinID:
XP_026090869
Ensembl:
ENSCARG00000069244
UniProt:
A0A6P6M2J0
LinkDB
All DBs
Position
46:15823114..15867746
Genome browser
AA seq
1258 aa
AA seq
DB search
MSHRFRLYFGSGRGNTELEQLNGTVEDGDDSGYCGAGATMCHTQTQIEGLSESPELSACS
DASLKRSSSMFIPQLQGQTEPRTTKSTSVQISLQRTTAPQEDALPFDPPPDYPRDPAPPY
TEPGESWALPPPPAYYRGETPSCQNVEQSQPGTEPIQPKRQVFYVRPCDGQNGNASAPSN
QGITIGGFCIQRRSADGSDVQRFRIMPYSENDQNGHRWAVQQSSDRGPGTQRLVFQLQKD
QGRHPSPTSQADDLGITGIKGSPLVRYPRIQLERSTSQTMQPRGAPSRLGSMPNLHSPIS
EMETESEILESSTQVCTFKIRKEQNSRQSKFKICFSHGGEHSPILARDISFGKVPNCSNQ
QTRDDFLGQVDVPLTHLPTEDPAMERPYTFKDFLLRPRSPKSRVKGYLRLKMAYLPKNGG
HEEESSEMREETEGWEVTDSTDPGSPRPQQLLPPLPQGWEEKVDNLGRTYYVNHNNRTTQ
WKRPSSVDVVSETENDNNLRHINQEARRVFRSRRHISEDLENEHLDIRDIDDSWEPISEE
DPTLIADDLSHSPSGPSSLAMPLSSTPEFSDEISLRLPLTPDMNGEIPGPSSAVQSPLSS
RLRSSSMTDGVSDQAQAPTPTSSQTRRTRAQTVTGVEDTMSPSASYALTTPGLPPGWEER
RDPKGRTYYVNHNNRSTTWTRPILQQHPEDGASTSAAAAGGATAATPPASTPPSSSGHLN
EPQVRRARSLSSPTVTLSSSLEGANNGQIRRAVKDTLSNPQSPQPSPYSSPKSQHKVNQS
FLPPGWEMRLAPNGRPFFIDHNSRTTTWEDPRLKYPVHMRTKASLDPGDLGPLPPGWEER
VHADGRTFYIDHNTKKTQWEDPRLQSPAITGPAVPYSREFKQKYDYFRKKLKKPADIPNR
FEMKLHRNNILEESYRRIMSLKKPDNLKARLWIEFESEKGLDYGGVAREWFFLLSKEMFN
PYYGLFEYSATDNYTLQINSNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYK
MMLGKQITLNDMESVDSEYYNSLKWILENDPTELDLRFAIDEDNFGQTYQVDLKPSGSEM
VITNDNKKEYIDLVIQWRFVNRVQKQMNAFLEGFTELITIDLIKIFDENELELLMCGLGD
VDVNDWRQHTVYKNGFCPNHPVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELY
GSNGPQLFTIEQWGTPDKLPRAHTCFNRLDLPTYETFEDLREKLLMAVENAQGFEGVD
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaccggtttcggttgtattttggatctggtcgaggtaacactgagttggagcag
ctaaatgggacagtggaggatggagatgatagtggctactgtggcgcaggggccacaatg
tgccatacacagacacaaattgaaggactttctgagagcccagaattgagtgcttgttca
gatgcctctctaaagcgaagctcttccatgttcatcccacagctccagggtcaaactgaa
ccacggacaaccaagagcacctctgtccagatttctctccaacgcacaactgcacctcaa
gaagacgcattgccctttgatccacctccagattaccctcgggatccagctcccccatac
actgagcccggtgaaagctgggccttacctccacctccagcttactacagaggagaaacc
ccatcttgccaaaatgtggaacaatctcaaccaggtactgagcccattcagcctaagagg
caagtcttttacgtccgaccatgtgatggacaaaatggtaatgctagtgcacccagtaat
caagggattaccattggaggtttttgtattcaaagaagatccgcagatggctcggatgtc
cagcggttcaggatcatgccctacagtgagaatgaccagaatggccaccgttgggctgtt
cagcaaagctcagacagaggtcctggaacacaaagacttgtattccagcttcaaaaggac
caaggacggcaccctagccctacttctcaggctgatgatttgggcatcacgggtattaaa
ggcagccccttggtgcggtaccctcggatccaacttgagaggagcacctcacagacaatg
cagcccagaggagctccttcacggcttggatctatgccaaatcttcattccccgatctca
gaaatggagaccgagagtgagattcttgagagcagtactcaagtttgcacattcaaaatt
aggaaggaacagaactcccgacagtccaagtttaagatctgtttcagccatggaggtgag
cacagccccatccttgcacgggatattagctttggaaaggtgcctaactgcagcaatcaa
cagaccagagatgacttcctcgggcaggttgatgtgcctcttacccatttaccgacggag
gaccctgcaatggagcggccatacacgtttaaagactttctcctgcgtccaagaagtcct
aagtctcgggtgaaaggctacctgaggctgaagatggcctacctgccaaagaatggagga
catgaagaggaaagtagcgagatgagggaagaaactgagggttgggaagtcacagactcc
actgatccaggttcaccaagacctcagcagctcctgcctccgctgcctcagggctgggaa
gagaaggtcgataacctgggacggacatactatgtcaaccacaacaaccgcaccacacag
tggaagaggcccagtagtgtagatgtggtttcagaaacggaaaatgataataacttacgg
catattaaccaagaagcccgcagagttttccgctctcgacggcacattagcgaagatctg
gaaaatgagcatctggacatcagggacatagacgattcatgggaacccatatcagaggag
gacccaactttaattgcagacgatctaagccattctccgtccggaccctcctctttggcg
atgcccctctccagcactccagaattttcagatgaaatcagccttagattgcctctcact
ccagacatgaacggagaaatcccaggacccagctctgctgtgcagagtcctctttcctct
cgtctacgctcctctagtatgactgatggagtcagtgatcaagctcaagctcccacacca
acgagctcccagacccgacgaacaagagcacaaacggtcacaggcgttgaggacaccatg
tctccatcggcctcctacgccttgaccacaccaggccttccgccaggctgggaggaacgc
agagaccccaagggacgaacatactacgtcaaccacaacaaccgcagcaccacctggacg
cggcccattctacagcagcaccctgaagatggagccagtacctcagctgcggcagcaggg
ggcgctacagctgccacaccccccgcttccacccctccctcctccagcggccatctaaac
gaaccacaagtgcgcagagcccgtagcctcagttcccccaccgtcactctctcttcctca
ctagagggagccaataacggccagatacggcgagccgtaaaggacacgttatccaaccct
cagtccccgcagccgtctccctacagctcacccaaatcccaacataaagtaaaccagagc
ttcctgccccctggatgggaaatgagacttgcaccgaatggacggccgttcttcatcgac
cacaacagcagaaccaccacatgggaagatcctcgcttaaagtatcctgttcacatgaga
acaaaagcatccctggaccctggcgacctcggcccacttcctcctgggtgggaggaacga
gtgcacgcagacggaagaaccttttacatcgaccataacaccaaaaaaacgcagtgggaa
gaccctcgcctccagagtcctgccataactggacctgcggtgccatattccagagaattc
aagcagaagtatgactacttcagaaagaagttaaagaagccggcagatattccaaaccgt
tttgagatgaagctgcacaggaataacatcttggaggagtcgtacagacgcatcatgtcc
ctgaagaaacccgacaatctgaaggcccgtctgtggatcgagtttgaatcggagaaaggc
ctggactatgggggcgtggccagagaatggttcttcctgctctccaaggagatgtttaac
ccttattatgggctgtttgagtactcggccacagataactacacccttcagatcaattca
aactctggcctctgtaatgaggatcacctctcatacttcaagttcatcggtcgggtggct
ggcatggctgtttatcacggaaagctgttagacggtttcttcatcagaccgttctataaa
atgatgctgggcaaacagatcacactgaatgatatggagtcagtggacagtgaatactac
aactctctcaagtggattctggaaaacgaccccacagaactggacttgcggttcgcaatt
gatgaggacaactttggacagacatatcaggtggatttaaagccgagcggatcagagatg
gttataaccaatgacaacaaaaaagaatacatagacctggtgattcagtggcgatttgtg
aaccgggtccagaaacagatgaatgcctttttggagggcttcaccgaacttattactatc
gacttgataaagatttttgatgagaacgaactggagctgctgatgtgtggtctgggtgac
gtggatgtcaatgactggaggcagcacaccgtctataagaatggcttctgtcctaatcac
cctgtaatccagtggttctggaaggccgtgttgttaatggatgcagaaaaacggatccga
cttttgcagtttgtcactggaacatccagagtgccaatgaacggctttgctgaactctac
ggctccaatgggccgcagttgtttactatcgagcagtgggggacacctgacaaactccct
cgtgctcacacatgctttaatcgtctggacctcccgacgtacgagacgtttgaagacctg
cgagagaagcttctgatggcggtggaaaacgctcaaggcttcgagggggtcgactaa
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integrated database retrieval system
