Carassius auratus (goldfish): 113064343
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Entry
113064343 CDS
T07313
Name
(RefSeq) nuclear RNA export factor 1-like isoform X1
KO
K14284
nuclear RNA export factor
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03008
Ribosome biogenesis in eukaryotes
caua03013
Nucleocytoplasmic transport
caua03015
mRNA surveillance pathway
caua05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113064343
03015 mRNA surveillance pathway
113064343
03008 Ribosome biogenesis in eukaryotes
113064343
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113064343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113064343
03009 Ribosome biogenesis [BR:
caua03009
]
113064343
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113064343
mRNA cycle factors
Stress granule specific factors
113064343
Ribosome biogenesis [BR:
caua03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
113064343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_8
UBA_8
LRR_4
LRR_9
Motif
Other DBs
NCBI-GeneID:
113064343
NCBI-ProteinID:
XP_026090885
Ensembl:
ENSCARG00000069126
UniProt:
A0A6P6M2B4
LinkDB
All DBs
Position
46:15763308..15774346
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AA seq
640 aa
AA seq
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MAAADDSRYYSEHDDRVGGPKHRNRKGRGPFRAPLYSDQFSRPRHRGGRGGGGGGGAPGP
WSRLQDDDGDVTMSDGPQDMGSQRRFNPYGRPQNRREERNRKGRGGGNGNGGGNEDRGGN
RYGGRNGGGGSDGSRKNWFKMTIPFGKKYEKDWLLSSLQSASSTTFHAVHYHTDGNKAQF
YVDDSTTANALFKASRKITDKDGYKVTVLMNSCPPPTLIYTDLKAADLEHLKQCMAKRFD
GSQQALDLNNIRVDPDLVSQNIEVTLNRRNSMLAVIKIIEENIPELVCLNLSNNRLHRLD
DLADIINKVPNLKILNLSHNELKTERELDKLKGLKLVELSLEGNPLCGHYKNQADFVSAI
RERFPKLLRLDGHDLPPPIVFDLEVAPATLPPCKASYFCSEEIKNIILCFLQQYYSIYDS
GDRQPLLDAYHDGAAFSLSIPFTLQNPSKSSLGDYQKDSRNIRRMKDDPTTRFRLMKHTR
LNVVAFLNELPKTQHDIASLIVDVNTYTATLLAFTVSGVFKEIDGKSRDSFRAFSRVFIA
VPAGNTGLCIVNDQLFVRNATTEEIRRAFVAPAPTPSSSPVPTLSAPQQEMLAAFSLKSG
MNLEWSQKCLQDNDWDFERAAQIFTGLKAQGKIPDVAFVK
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcggacgactcgcgctactatagtgagcatgatgatcgtgttggtggacca
aagcaccgtaatcgtaaaggcagaggccctttccgagcccccctgtacagcgatcagttt
tctcgaccgaggcatcgaggtggtcgtggtggtggtggaggaggaggagcccctggtcct
tggtccagacttcaggatgatgatggagatgtgaccatgtcagatggtcctcaagacatg
ggatcccagcgcagattcaatccatatggccggccacagaatcgccgcgaggaacgcaat
cgcaaaggacgtggcggaggcaatggcaacggaggtggaaatgaagatagaggtggcaat
cgatatggaggcagaaatggtggaggtggttctgatggaagccgcaagaactggtttaaa
atgactattcctttcgggaagaaatatgaaaaagattggcttttgtcttcacttcagagc
gccagttccacaacatttcatgccgttcattatcacactgatggcaataaggcccagttt
tatgttgatgactccacaactgctaatgctttgtttaaagcgtcacgaaaaataacagac
aaagatggatataaggtgactgttctaatgaacagctgcccacctcctactttgatctac
actgatctgaaggccgcagatctggagcatttgaagcaatgcatggccaagcgctttgat
gggtcgcagcaggctctggatctgaacaacatcagagtcgatccagatttggtttctcaa
aatattgaagtcactttgaatcggaggaactccatgttggcagttatcaaaataattgag
gagaacattcctgagctggtttgtctgaacctgagcaacaaccggttgcacaggctcgat
gacttggcagatattatcaacaaagtccccaacttgaagattctcaatctgtcacataat
gagctgaagacggagagagaacttgataaactgaagggtctgaagctggtcgaactctca
ttggaaggaaatccattatgtggacactacaagaaccaggctgactttgtcagtgccatt
cgggaacgattccccaagctgctcagactggatggacacgaccttccacctcccattgtt
tttgatttggaagttgctcctgcgactctccccccctgcaaggccagctacttctgctct
gaagaaatcaagaacatcatcctttgcttcctgcaacagtattacagcatatatgactcc
ggagacagacagcccctactggacgcctatcatgacggggcagctttctccctcagcatt
cccttcaccctgcagaacccttcaaaaagtagtttaggcgattatcagaaagacagtcgc
aatatcagacgtatgaaagatgaccccactacacggtttcgtctgatgaaacacacaagg
ttaaatgtggtggctttcctgaacgaactccccaaaactcaacatgacatcgcctccttg
atcgtcgacgtcaacacctacacagctacattgttggcatttacagtcagtggagttttc
aaagagatagatggcaaatcccgagactcgttcagagccttctcccgggtgttcatcgct
gttcctgctggaaatactggcctgtgcattgtaaatgatcagctctttgttcgaaatgcc
actacggaggaaattcggcgtgcgtttgttgctccagcccccacaccgtccagcagccct
gtgcccactctgtctgccccccaacaggaaatgcttgctgccttctccctcaagtctggc
atgaacctagaatggtctcagaaatgcctacaagacaacgattgggattttgaaagggct
gctcagatcttcactggccttaaggcacaaggaaagatcccagatgtcgcattcgtcaaa
tga
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