Carassius auratus (goldfish): 113064704
Help
Entry
113064704 CDS
T07313
Name
(RefSeq) stabilin-1-like isoform X1
KO
K19020
stabilin-1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113064704
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113064704
Glycosaminoglycan binding proteins [BR:
caua00536
]
Hyaluronan
Cell surface receptors
113064704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
cEGF
FXa_inhibition
EGF_2
EGF_Teneurin
EGF
EGF_MSP1_1
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
113064704
NCBI-ProteinID:
XP_026091369
Ensembl:
ENSCARG00000068815
UniProt:
A0A6P6M458
LinkDB
All DBs
Position
47:complement(1442317..1475088)
Genome browser
AA seq
2551 aa
AA seq
DB search
MSYLLILGLMVLWTSHIQAVSNRCNASVDVLHKTPCTSCAASAAVVCPRGFRKINQNPEI
CKYVVEIGSRQVELSGCSHSCQGVTTVQHCCPGFWGSLCLPCPSWSGKICNGYGTCESEN
GTCVCNEGYTGFACQNCVNENAYGDHCRSECSCVNGKCNSGPNGDGECYCQPPFSGPKCD
KVSSSCSNCPAHSYCKGDHTNAVCECLPGFKKKGNACTGSWCSPAICDTNAKCVLSGGKF
QCECEEGFRGDGKHCIPINPCDANNGGCPVESTACEFTSPGNSKCVCLPGMESSDPSKGC
MQKSACTSGSCHVSARCETNSDGTPSCRCNAQQIGDGRRCYANLMERVLELDRDGSQAGN
LTGSLRFFEQACEFTLSQHGPFTAFIPVGQNPFQTLTGSSSSSVLNEVCKNHLILGQKLY
RDLEGKDMWMYGGEKIRFKTKKHFILMRDPDVLFTILESDIPASNGIIHIIDKPFTLAHI
ESSNNNMEFSSKTIREIFREDERFNRFLSLIDNCGALLPVGGSGPLTVFVPSNTAIDRFR
DGSLVYMLNDAKPKLQSLLKHHMFSLAAVTVDQLASMSEITTMANEVLRINASEDGRVFL
GDKGIYLETKDIVASNGIIHMIDGVLVPSFIVPIMPHRCDINGSRISFGTCVRCSHIHET
QCPPGSVELENYLRGCEPIPDQRWSYSIYEEGCAKYCNITQTMPQCCSGFYGPDCKPCIG
GFQHPCYDKGTCFDGINGNGSCKCEPAFTGVGCHLCSDPNKHGENCDEDCHCVHGICDNR
PGSMGVCRRGSCRDGFSGKLCDQTATPCNSDGVLEHCHIHAKCVYNNQQTMCVCLPGYEG
DGYTCIKTDPCLQPQRGGCDVNARCMYSAGMVNCACMEGWTGDGRLCVGINNCLSESRGG
CHENAECRVTGPGQNECSCRKGYMGDGIVCKTVNPCMSNNGGCHSLATCKLKSPGVRECV
CPSEYKGDGITCYGNMLMELDGNSEFYNFNRFLQRHRVIDSDSRVTALVPSIAAFRNLSD
SESSIWFDYYMLPHLLQVHFLDGIYTSEDLQKLVGKTVQTLGKTKWEVKSNGRQLMIGNA
TILAPDLKAINGCIHIIDTVLRPPLSDFPPPPPSLTTLLNDTPDFSLFRQTALLYNLENR
IPTRDYTIFIPNDSAIQEYLKKTNSTQLSQDIVKYHVIVGEQLFPEHLGNGLFKNTFLGN
GTQIMFFVDTDNQTMANDVPIDGRFIETRHGTVFRIPRVLDLHKNHCSKDVVLKVAGRCG
DCTAEPKCALNEKPLQPKFPQNMKSNCIYRTRVGKKRLNVPGCHMECLRTTKDHSCCPGY
FGHDCSKCPGTVNNWCSNNGQCKDGLYGSGECLCNEGFHGTACEMCEPGRYGKDCKSECH
CEHGKCLDGMEGNGQCICYKGWKGVNCSVAVVNDACGGVCDVNANCISGGSGAHPTCSCI
AGFKGNGTFCKEFDPCTTNNGGCSINANCTKTSPGERSCTCKAGYIGDGVVCLEMDACLV
DNGGCDRNALCMKTGPNRVACACKPGFISQGHKCLAVNPCRKDNGGCSVNAVCRYLGDGE
RNCTCYFGYKGDGFKCAGTVSREILRMPEAAWMRRNIGVTRVRDLYSKGPFTVFVPHADY
VANVSVEMWTNTSRSSDLLRYHVVSCEELRESNLKSVKEVVTSSGYKLRFSVRDGVVYIN
GNTKIITSDVECFDGVIHFIDKVLFPYDLTRKADVATDLNITAAAEQYGFNIFSKLLQDA
ELMHVVRHQPFYPFTMFWPTDDVFNKLPEDRKKWLYSEDHRDKLQAYLKAHIVRDQRVVA
VALTAEKKMETLFGSELTFSCNKDLIGDILINGNNGRITVRNMLFNSGIAHGIDQLLEPP
SIGARCDDFKSVEVKGLCGSCSLLPRCPLGSEDTNRTSICRRPYSPYMYRRPSYYGLYSY
GYGYNSYRDWLGCNRICTRMTWSVKCCKNHFGRDCQVCPGGLEAPCGEHGDCDDDHTGTG
TCRCHKGFRGTACELCESNHFGPNCTACNCTSKGTCDSGQDSDGSCFCQEGWTGKYCESK
IEVKPICSPACDINAVCLPANQCECVPPYGGNGINCTAPDLCSEYNGGCHEAADCSQTGV
NVTCSCQTGYSGDGHVCSPINRCVEEANGGCSDFAECIFTGPNERRCECLEGYVGNGIQC
LEKVVPPVDRCLEDNGGCDPKATCKDLHFHIKTAGVFHLRSSEGKYKLNFSQAQEACEAE
GATLASFKQLSDAQQLGMHLCVVGWMDGKKAGYPIRFPSAKCGDNHVGIVLYKEPVNASW
SYDAYCYRINEVSCECKPGYVGSGEFCNGDLASVVATTFNFSVFYTTLLKYAEDSEEGKN
LLKSLSDKSLNITLFVPHNDGFSANKTLSWRDLLYHISSINSLHYFEDLKHNTVIPSRLG
SDLVVTIPSNSTGQAEDSQPQKLVNKKVILAWNIPAINGLIHVIDGPFRAPPLPVPPILP
ISQSSSVAVTTVLIVFAIVAIVAGLAYYVLKHKNDAFRFQYFKNDDEDGASTKGGGNPAL
VSIPNPLYSGYRAFTEPFGDSAATDTSNLMD
NT seq
7656 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcttctcattttgggactcatggtactgtggacttcacacattcaggccgtt
tctaaccgctgcaatgcatccgttgatgtccttcacaagactccctgcacttcctgtgcc
gcttccgccgccgtcgtctgcccgcgagggttcaggaagatcaaccagaaccccgaaatc
tgcaaatacgttgtggaaatcggcagtcgtcaagtggagctgtcagggtgttctcacagc
tgtcagggcgtcacgacagtccagcactgctgtccgggcttctggggctccctgtgcttg
ccttgccctagctggtctggaaagatttgtaacggttatggtacatgtgaatctgaaaat
ggcacctgtgtttgtaatgagggatatacaggttttgcgtgtcagaattgtgtgaatgag
aatgcctatggagaccactgccgttcagagtgcagctgtgtgaatggaaagtgtaactcc
ggtccgaatggagatggtgaatgttactgccagccgccattttcaggcccaaagtgtgat
aaagtttcttcatcttgttcaaactgcccagcccattcatactgtaagggagaccacaca
aatgctgtgtgcgaatgtctgcctggattcaagaagaaaggaaatgcatgtacaggttcc
tggtgttcaccggcgatttgtgacacaaatgctaaatgtgtattaagcggtggaaagttt
cagtgcgagtgtgaagagggattcagaggagacggcaaacactgcattcccatcaacccc
tgcgacgctaataacggaggctgtcctgtggagtccaccgcctgtgaattcacaagccca
ggaaattcgaaatgtgtgtgtttgcctggaatggaatcgtccgacccgtccaagggctgc
atgcagaagtcggcctgcacatcgggttcatgccatgtcagcgcccgctgcgagaccaac
tcagacggcacgcccagctgccgctgcaacgctcaacagatcggcgatggcagacgctgc
tatgctaacctcatggaaagggttctggagctggacagagacggcagtcaggcaggaaac
ctcactggaagccttcggttctttgagcaagcgtgtgagttcacactcagccagcacggc
ccgttcacggcgttcattcctgtgggacagaatcctttccaaactcttacaggaagctcc
tcgagcagtgtcctgaatgaagtgtgcaaaaatcacctcatcctcggacagaaactctac
agagatctggaggggaaagacatgtggatgtacggaggagaaaagatccgattcaaaaca
aaaaagcattttatcctgatgagggatccagacgtgttgtttactatacttgagagcgat
atcccagcatccaatggaataattcatattattgacaagccctttacgcttgctcatatc
gagtcttcaaacaacaacatggagttctcctcaaagaccatcagggagattttcagagag
gatgaaaggttcaatcgattcctgtctctgattgataattgtggagccctgttgcctgtc
ggaggttcaggtccgcttacagtgtttgttccttccaacacagccatagacagattcaga
gatggaagtcttgtgtacatgctgaatgacgccaaaccaaagcttcagtcacttctgaaa
caccatatgttctccctggctgctgtcactgtggaccagcttgctagcatgtctgagatt
acaacaatggccaatgaggtcttaaggatcaatgcctctgaggatggaagagtctttttg
ggcgataaaggaatatatctcgaaacgaaagacattgtcgcatccaatggaatcattcac
atgattgatggagttcttgtgccttccttcatagttcccataatgccccatcggtgtgat
ataaatgggagcaggatctcttttggtacctgtgtccgatgcagccatatccatgagaca
caatgtccgcctggaagtgttgagctggaaaattatttaagaggctgtgagccaattcct
gatcaacgatggtcgtactctatctatgaggaaggctgtgccaaatactgcaacattact
cagacgatgccacagtgttgtagtggtttctatgggccggactgtaaaccgtgcattggg
ggtttccagcacccatgttatgacaaagggacttgttttgatggcatcaatgggaacggc
tcctgtaagtgtgaaccagcgtttacaggtgtaggctgccacctctgctcagaccccaac
aaacatggagagaactgtgatgaagattgccactgtgtccatggcatttgtgataacagg
cctggcagtatgggggtgtgtagaagaggatcctgtcgggatgggttttcagggaagctt
tgtgaccagacagccaccccctgcaattcagacggcgtcctcgagcactgccacattcac
gccaaatgtgtctacaacaaccagcaaaccatgtgtgtttgtctgcctggatatgaagga
gacggctacacctgcattaaaaccgatccctgcctccaaccgcagagaggaggctgcgat
gtcaatgccagatgcatgtacagtgcaggaatggtgaattgtgcttgtatggaaggatgg
acaggtgatggacgtttgtgtgtgggaatcaataactgcttgagcgagagtcgtggtgga
tgtcatgaaaatgcagaatgcagagtcaccggaccaggacagaatgaatgtagctgcagg
aaaggctacatgggagatggcatcgtctgcaaaactgtcaacccctgcatgtcaaataac
ggaggctgccattctctggccacatgtaaattaaagagcccaggagtacgtgaatgtgtg
tgcccaagcgaatacaaaggcgatggaatcacgtgttatggaaacatgcttatggagcta
gatggaaactcagagttttataatttcaaccgcttccttcaaaggcacagggtgattgac
agcgacagcagagtcacggctttggttccatctatagctgctttcagaaacctcagcgat
tcggagtcgtcgatttggttcgattattacatgcttcctcaccttctgcaggttcatttt
ttagatggcatatacacctctgaagacttacagaagctggttggtaaaacagtccagacc
ctaggaaagactaaatgggaggtcaaaagcaacggcaggcagcttatgatcggcaatgct
accatcctcgctccagatctcaaggcgataaatgggtgcattcacatcattgacacggtt
cttcgacctcctctatctgatttccctccaccgcctcccagtttgacgacgctcctgaac
gacacgccagatttcagccttttcaggcagacagcgctgctctacaacttggaaaacagg
atcccaactagagattacaccatttttatcccaaatgacagcgccatacaggagtacctg
aaaaaaacgaactcgacacaactgagccaggacatcgtgaaatatcacgtaattgtaggc
gagcaactctttcctgaacacttgggcaatggactttttaaaaacacgtttttgggaaat
ggcactcagatcatgttttttgtggacactgataatcagacaatggctaatgacgtacct
atagacggacgcttcattgagacgaggcatggcacagtgttcaggatcccacgtgtctta
gatctccacaagaaccactgcagtaaagatgtggttttaaaagttgctggtcgctgtgga
gattgtacagctgaaccgaaatgcgctttaaatgagaaacctctacaaccaaagttccct
caaaatatgaagtcaaattgtatatacaggacaagagttggaaagaagagattgaatgtg
ccgggttgtcacatggaatgtttgagaacaactaaggaccattcttgctgtccgggatac
tttgggcatgattgctccaaatgccctgggactgtgaataactggtgctccaacaacggt
caatgcaaggatgggctttatggcagtggggagtgtctctgtaatgagggcttccacggg
acggcctgcgagatgtgtgaacctgggagatatggaaaagactgcaagtccgaatgccat
tgtgagcatggcaaatgtttggacggtatggaggggaacgggcagtgcatttgttacaaa
ggatggaagggagtgaactgctctgttgcggtagtcaatgatgcctgtggtggagtttgc
gatgtcaatgctaattgtatctcaggaggttcaggagctcatccaacttgttcctgcata
gctggttttaagggtaacgggacattttgcaaagaatttgacccatgtaccacaaataat
ggaggatgttccataaatgcaaactgcacaaaaacatcgcctggtgaaaggagctgcaca
tgtaaagctggctacattggtgatggggttgtgtgtctcgaaatggatgcctgtttagtg
gacaatggaggatgtgacagaaatgctttatgtatgaaaactggaccaaacagggttgca
tgtgcatgcaagcctggttttatttctcaaggccataaatgtctggcagttaatccttgt
cggaaggataatggcggctgcagtgttaatgctgtttgcagataccttggggatggggaa
cgtaattgcacatgctatttcggctacaaaggagatggttttaagtgtgcagggacagtt
agtagagagattcttcgtatgcctgaggcagcatggatgagaagaaatattggtgtaaca
agagtccgagatctgtacagtaaaggccctttcactgtatttgttcctcatgctgattat
gtggcaaatgtctcggttgaaatgtggacaaatacaagtcgcagttcagacctgctgcgg
taccacgttgtcagttgtgaagaactgcgtgaatcaaacctcaaatctgttaaagaagtg
gtcacgagtagcggatataaattacgcttcagtgttagagatggtgttgtgtacatcaat
ggcaatacaaagatcatcaccagtgatgttgagtgcttcgatggagtcatacatttcata
gacaaggtcctgtttccatacgatctaacgcgcaaggcagatgtcgccactgatttgaac
attaccgcagctgctgaacaatatggcttcaatatcttcagcaagctcctacaggacgca
gaattgatgcatgtggtgcgacatcaacccttttatccattcaccatgttctggccaaca
gatgacgtttttaacaaactccctgaggacagaaagaaatggctgtacagcgaagaccat
cgtgataagctacaagcctacctcaaagctcacatagtccgcgaccagagggtagttgcg
gttgctcttactgctgagaaaaaaatggaaacattgtttggatcagagctcaccttcagt
tgcaacaaagatttaattggcgacatcttaatcaatggaaacaatggcagaatcacagtg
cggaacatgttgtttaattcaggaatcgctcatgggattgatcagcttctggagccgccg
agcattggcgctcgctgcgacgacttcaaaagcgtggaggttaagggactctgtggctcc
tgcagtttgctgccccgttgtcccctcgggtcagaggacacaaacagaactagcatatgt
agacggccgtattcaccttacatgtacagacggcccagttattatgggttgtactcgtat
ggttatggatacaactcatacagagattggcttggctgtaatcggatttgcacgagaatg
acgtggtctgttaagtgctgtaaaaaccactttggaagagactgtcaagtgtgtcctggt
ggactcgaggcgccctgtggagaacatggagactgcgatgacgaccacaccggcacaggg
acgtgtagatgtcacaagggttttagaggcacagcctgtgagctgtgtgaaagcaatcac
tttgggccgaactgcacagcatgtaactgcaccagcaaaggcacgtgtgacagcggccag
gacagtgatggcagctgtttctgtcaagaggggtggacggggaaatactgcgaatccaaa
atcgaagtcaagccgatctgctctcctgcatgtgatatcaatgcagtttgtctccctgca
aaccaatgcgagtgtgtgccgccctatggaggaaatggcatcaactgcacagctccggat
ctttgcagtgaatataacggaggctgccatgaggcagcagactgttcgcagactggtgtc
aatgttacctgttcctgtcagacgggatactctggagatggacatgtctgctcgcccatc
aaccgatgtgtagaggaggcgaacggtggttgcagcgatttcgcagaatgcattttcact
ggacctaatgagaggcgctgtgaatgtctcgagggatatgtgggaaacggaatccagtgt
ttggagaaagtggtgccccctgttgaccgctgcctggaggacaacggcggctgcgacccc
aaagccacatgcaaagatcttcatttccacataaaaacggcgggtgttttccatctgcgc
tcatctgaggggaagtataaactgaacttcagccaagcacaggaagcttgcgaggccgag
ggagccactcttgcttcattcaagcagctctctgacgcccaacagttgggaatgcatcta
tgtgtggtaggatggatggacggtaagaaagctggctatccgatccggtttccttcagct
aaatgcggcgataatcatgttggtattgtgctgtacaaagagccagtcaatgccagttgg
tcatatgatgcgtactgctaccggattaatgaggtatcttgtgaatgtaaacctggatac
gttggaagcggggaattctgtaatggagacctggcctcagttgttgccaccactttcaac
ttttctgtgttttacacaactttactgaagtatgcagaagatagcgaggagggcaagaac
ctgctgaagtccctgtccgacaaatcattgaacatcacactttttgtacctcataacgac
ggtttctctgcaaacaagaccttatcatggagggatttgctgtatcatatatccagcatc
aatagtctgcactactttgaagacctgaagcacaacactgtgatcccgtcccgtctgggc
tctgatctagttgtgacgattccgtccaattccaccggtcaggctgaggactctcaaccc
caaaaactggtgaataagaaggtcatattggcctggaacattccagcaatcaatggtctg
atccacgtcattgatgggcctttcagagctcctcctcttccagtgccgccaattcttcca
atctcgcagtccagcagtgtcgcagtcacgactgtgctgattgtcttcgcaattgttgcc
attgtcgcagggctcgcatactatgtcctcaagcacaagaacgacgcctttcgtttccag
tattttaagaatgatgatgaagatggtgcttccacaaaaggtggtggaaaccctgcttta
gtatccatcccaaaccctttatacagcggctacagggcgtttacagagccatttggggat
tcagctgctacagacacatccaacctcatggactag
DBGET
integrated database retrieval system
