KEGG   Carassius auratus (goldfish): 113064885
Entry
113064885         CDS       T07313                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03020  RNA polymerase
caua03420  Nucleotide excision repair
caua04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113064885
  09124 Replication and repair
   03420 Nucleotide excision repair
    113064885
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    113064885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:caua03021]
    113064885
   03400 DNA repair and recombination proteins [BR:caua03400]
    113064885
Transcription machinery [BR:caua03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     113064885
  RNA polymerase III system
   RNA polymerase III
     113064885
  RNA polymerase I system
   RNA polymerase I
     113064885
DNA repair and recombination proteins [BR:caua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113064885
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NYD-SP12_N
Other DBs
NCBI-GeneID: 113064885
NCBI-ProteinID: XP_026091661
Ensembl: ENSCARG00000041231
UniProt: A0A6P6M6X2
LinkDB
Position
47:5268290..5271713
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFRSQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHIVMTKEEVTELLARYKLKESQLPRIQAGDPVA
RYFGLKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgatgaggaagagacttacagactatggaaaattagaaaaactatcatgcagctt
tgccacgatcgtggttatttggtgacgcaggacgagctggaccagactctagatgagttc
agaagccagtttggagacaaacccagcgaaggtcgaccacgacgaaccgatctcacggtc
ctggtggcccacaacgacgatcccaccgaccagatgttcgtgttcttccctgaggaacca
aaggttggcatcaaaaccataaagatgtattgccagcgtatgcaagaagaaaacatcacc
cgggccatcattgtagtccagatgggcatgacgccctccgccaaacagtctctggtagac
atggctccaaagtacatacttgagcaatttcttcagcaggaacttctgatcaacattacc
gaacacgagcttgttccagagcacatagtgatgactaaagaggaagtgacagagttgctg
gcgcggtataaactaaaggaaagccagcttcccaggattcaagctggggatcctgttgcc
cgttacttcggcttgaagagaggccaggttgttaagatcatcagaccgagtgaaactgcg
ggacggtacatcacatacagactggtccagtga

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