Carassius auratus (goldfish): 113065056
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Entry
113065056 CDS
T07313
Name
(RefSeq) transcription factor Sox-1b-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113065056
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113065056
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113065056
NCBI-ProteinID:
XP_026092001
UniProt:
A0A6P6M7Z2
LinkDB
All DBs
Position
1:12447381..12449456
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AA seq
342 aa
AA seq
DB search
MYSMMMETDLHSPGPHTNTNTGHTGPNGGSKVNQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMTEPEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLAGSGGGGGVGLGMGMGAPGVGQRLDSPVGHGVNTAASYAHMNGWTNGAYSGQ
VAAAAAAAAMMQEAQLAYSQHPGSAAHHHHGHHHHPHNPQPMHRYEMTALQYSPLSNSQS
YMSASPSGYGGISYTQHQNSSMASSGAIGALGSLVKSEPSVSPPVTAHSRAPCPGDLREM
ISMYLPAAEAGDPSAQSRLHAVPQHYQSSATSVNGTVPLTHI
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaacggacttgcattccccgggaccccatactaacacaaac
acgggccacacgggacccaacggcggcagcaaagttaaccaagaccgtgtcaagagacct
atgaacgcgtttatggtgtggtctcggggtcagcgcagaaaaatggctcaggagaaccca
aagatgcacaactcggagatcagcaagcgcctcggagcggagtggaaagtcatgaccgag
ccggaaaagcgacccttcattgacgaggcgaaaagactgcgtgccatgcacatgaaggag
cacccggattacaagtaccgaccccggaggaagaccaagacgctgctcaagaaggacaag
tactctttggcaggtggcctgctcgctggatcaggtggcggaggcggcgtggggctgggg
atgggaatgggtgcaccgggggtcgggcagaggttagacagtccggtgggtcacggtgtc
aacaccgcggcgagctacgcgcacatgaacggctggaccaacggggcgtactcggggcag
gtagcggccgccgcggctgcagccgcgatgatgcaggaggcgcagctcgcctacagtcag
catccgggcagcgcagcgcatcaccaccacggacaccatcaccatcctcataacccccag
cctatgcaccgctacgaaatgacggctctccagtacagcccactctcaaactctcagagc
tacatgagcgcctcgccgtcaggttatgggggaatatcctacacacaacaccaaaactcc
agcatggcttcctctggggccatcggcgcgctgggctcgctggtgaaatcggagcccagc
gtaagtcctcccgttacagctcactctcgagccccttgtcccggagacttgcgagagatg
ataagcatgtatttaccagcggcggaggcaggggacccgtccgctcagagcagacttcac
gctgtaccgcagcactatcaaagttccgcgacgagcgtaaacggaaccgttcctctgaca
cacatatga
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