Carassius auratus (goldfish): 113065441
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Entry
113065441 CDS
T07313
Name
(RefSeq) ubiquitin conjugation factor E4 B-like isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04120
Ubiquitin mediated proteolysis
caua04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113065441
04120 Ubiquitin mediated proteolysis
113065441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113065441
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113065441
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
U-box type E3
113065441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
113065441
NCBI-ProteinID:
XP_026092459
Ensembl:
ENSCARG00000057511
UniProt:
A0A6P6M792
LinkDB
All DBs
Position
48:1039268..1057792
Genome browser
AA seq
1269 aa
AA seq
DB search
MGASGVACRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDTASCEKSMSQVDVDSGI
ENMEVEDSDRREKRNLAEKDSSSSSDVSEEQALHLICKILRVSWKEQDRDVIFLPSLAAE
FQKNPRDVYSDFRDLIGQILMEALMMSTRSRDCNPFASLTATSQPITAARSPDRHLTLVP
PSSQSGSPMMPCAGSFGASSLSSLYGCSPNPLALSSARMSAPSVPLAPAAAHPGPPSPPA
SRPPASLLLPSPSTPLPISQRYRPYSLSSSIPISPSQRASQSGMLTPPTTSGIPSSPSPR
HHSTDSSMPYPGSPSTVPRRTRLATRMPSSPFSLFFGLSDLPQDSSDEEPEEEEDEDFSG
VPFGSSLGASGGGMAGDSCSDRFTIESCKETEMLNYLIERFDSVGMEERKALKMCSQPAV
SQLLSNIRSQCISHAALVLQGTLTQPRAPLQPSLLVPYMLCRNLPYGFIQELVRMTHQEE
DVFKQIFVPILQGLTLAVKECSFDSDNFKFPLMALVELCEIKFGKTHPVCNLITSLPLWC
PDPLSPGTGREIQRLSFLGAFFSLSVFAEDDTKVGDKFFSGPAITVENTRVVSQSLQHYL
ESARGDLFKILHNILLNGETREAALSYMAALVNRNVKKAQIQTDDKLVSTDGFMMNFLWV
LQQLSMKIKLDTVDPLYIFHPKCRLNVSTEETRLKATMEDLKSWLSELHEDPSKFSEPKF
PTECFFLTLHAHHLSILPCCRRYIRRLRAIRDLNRTVEELKNSENQWKDSPLASRHREML
KRCKTQLKKLVRSKACADAGLLDENLLRRCLQFFSMVIQLILRMVEPDYPGVTLPLNPEI
PKSFAALPEFYIEDVAEFLLFIVQYFPQVLYEPCTGDIVTFLVVFISSQNYIKNPYLIAK
LVEVLFVTNPAVQPRTQRFFEMMENHPLSINQLVPALMKFYTDVEHTGATSEFYDKFTIR
YHISTIFKSLWQNINHQGTFLEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEIQE
EMKNKEQWDQLPREQQQSRQSQLTQDERVSRSYLALATETVDMFHILTKQVQKPFLRPEL
GPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIAD
DQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLLEKVEEIVARNSQSEMDYGDAPDEFK
DPLMDTLMTDPVQLPSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLEPVPELKERIQAW
MRGKQSGRA
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgggggcctcgggggttgcttgccgcagccagagcagcgagggggtcagctctctctcc
agctctccatccaacagtctggagacacagtcccaatccctgtcccgctcccagagcatg
gacattgacacagcctcctgcgagaagagcatgtcccaagtagatgtggactcaggaatt
gagaatatggaggtggaagacagcgatcgcagagagaaaaggaacctggctgaaaaggat
tcctcatccagttctgacgtctctgaagagcaggctttgcaccttatctgtaagatcttg
cgtgtttcctggaaggagcaggaccgtgatgtcatcttcctcccctcacttgctgctgaa
ttccagaagaaccctagggatgtttactctgacttcagagacctgattggacagatttta
atggaggctctcatgatgtccacccgttcgcgtgactgtaacccattcgccagcttgact
gccacatctcagccaatcactgctgccaggtccccggaccgtcacctgactctcgtccca
ccctccagccagagcggcagtcccatgatgccctgcgctggttcattcggtgccagctct
ctttccagtctttacggttgtagcccaaacccactcgctctgagctctgccagaatgagt
gctccatctgtcccgctggctcctgcggccgcccacccgggtccccccagtcctcccgcc
tctcgccctcccgccagccttctacttccctctccatccacccctctgcccatctcccag
agatacaggccctactcccttagctcgtccatccccataagcccaagccaaagagcttct
caatctggtatgcttacgccccctacaacttcaggtataccctccagcccttccccaaga
caccatagcaccgactcctccatgccttaccccggctcccccagcactgtgcccagaagg
actaggctagccacccggatgccgtctagccctttctccctctttttcggcctgtccgac
ttgcctcaggacagcagtgatgaagagccggaggaagaggaagatgaggatttttcaggg
gttccgtttgggtccagcctgggtgcgtccggaggggggatggctggtgactcatgtagc
gaccgctttaccatagagtcctgtaaagagacggagatgctcaactacctcatcgagcgt
tttgacagtgtgggaatggaagagaggaaggccctgaagatgtgcagccagccagcagtc
agtcagctgcttagcaacattcgttcccagtgcatttcccatgctgcactagtgcttcaa
ggtaccctcacacagcccagggcccctctacagccctcactgctggttccctacatgctg
tgccggaaccttccgtacggcttcatccaggagttggtgcgcatgactcatcaggaggag
gatgtgtttaaacagatcttcgttcccattcttcaagggctcactttagctgtgaaagaa
tgttcttttgacagtgacaacttcaagttccctctaatggctttggttgagctctgtgaa
atcaagtttgggaagactcaccctgtatgcaatttgatcacctctctgccattgtggtgt
cctgaccctctcagtcccgggacaggaagagaaattcaaagactctcctttctcggcgca
ttcttcagtctttctgtgtttgctgaggatgatactaaagtgggagacaagttcttctcg
ggccctgccatcactgtggagaacacccgtgtggtcagccagtcactgcagcattatctg
gagtctgcgaggggagatctgtttaaaatcctgcacaatatcttgttgaacggagagaca
agggaagcagctctgagctacatggcagctctggtgaatcgtaatgtgaagaaggctcaa
atccagaccgatgataagctggtgtccacagacggcttcatgatgaacttcctgtgggtg
ctgcagcagctcagtatgaagatcaagctggacacagtggatcctctctacatcttccac
cccaagtgtcggctgaatgtcagcacggaagagacccggctcaaagccacgatggaggac
ctgaagagctggctctctgagctgcatgaagacccatccaagttctccgagcccaagttc
cctacagagtgcttcttcttaacgctacacgcacatcatctgtccatcctcccgtgctgt
cggcgctatatacggaggctgagggccatcagggatctaaacagaactgtggaagagctg
aaaaacagcgagaaccagtggaaggattccccgttggcaagtcgtcatcgggagatgctg
aagagatgtaaaacacagctgaagaaactggtgcgctctaaagcctgcgcagacgcaggg
ctgctggacgagaacctgctgcgcagatgtctgcagttcttcagtatggtcatccagctc
atcttgcgtatggtggaacctgactacccaggcgtaaccctgcctctgaacccagaaatc
cctaaaagctttgcagcactgccagagttttacattgaagatgtggccgagttcttgcta
tttattgtgcagtactttccacaggttctctatgagccatgcactggtgacattgtgacc
ttcctggtggtcttcattagcagtcagaattacataaagaacccatacttgatcgccaag
ctggtggaggtgctgtttgtcaccaatcctgcagtgcagccgcgcactcagcgattcttt
gagatgatggagaaccacccactgtctataaatcagcttgtgccggctctcatgaagttt
tacaccgatgtggagcacactggagccacaagcgagttctatgacaagttcaccatccgt
taccacatcagcaccatattcaaaagcctatggcaaaacattaaccaccaaggcaccttc
ctggaggagttcaactctggcaaacagtttgtgcgctacatcaacatgctaattaatgat
acaacttttctgctggacgagagtttggaatctctgaaacgcatccatgagatccaggag
gagatgaagaataaagagcaatgggaccagctgcccagggagcagcagcagagccgccag
tcccagctgactcaggatgagagagtatcacgatcgtacctggctttggccacagagacc
gtggatatgttccatatcctcaccaaacaggtccagaagcccttcctcaggcctgaactg
ggtcctcgtctggctgccatgttgaattataacctgcagcagctgtgtgggcctaaatgt
cgagacttgaaggtggaaaacccagaaaaatatggttttgagccaaagaagctcctggat
cagctgactgacatttatctgcagctggactgtgctcggtttgccaaagccattgcagat
gaccagcggtcatacagcagggagctgtttgaggaggtcatttcaaaaatgagaaaagcg
ggcataaaatccaccattgctattgagaaattcaagcttctgttggaaaaggtggaggag
atagtagcccgcaattctcagtctgagatggattacggcgatgccccggatgagtttaaa
gacccgctgatggacactctcatgactgatcccgtgcaactcccgtctggcaacatcatg
gatcgatccatcattctgcgtcacctcctgaactctcccacagaccccttcaacagacag
cctctcaccgagagcatgctggaaccagtcccagagctgaaggagcgcatccaggcctgg
atgagagggaagcagagtggccgtgcttga
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