Carassius auratus (goldfish): 113065539
Help
Entry
113065539 CDS
T07313
Name
(RefSeq) calsyntenin-1-like isoform X1
KO
K22659
calsyntenin 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113065539
Cell adhesion molecules [BR:
caua04515
]
Cadherins
Cadherin related
113065539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
TylF
FAM176
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
113065539
NCBI-ProteinID:
XP_026092649
Ensembl:
ENSCARG00000052199
UniProt:
A0A6P6M7U0
LinkDB
All DBs
Position
48:complement(3471291..3506631)
Genome browser
AA seq
977 aa
AA seq
DB search
MRIRGVKPSASAVALLLGLLCAVEAAKVNKHKPWIENTYHGIVTENDDKVLLDPPLIALD
KDAPLRYAESFEVTFTKEGEICGFRIHGQNVPFEAVVLDKSTGEGVIRAKDKLDCELQKE
HTFTIQAYDCGEGPDGGNMKKSHKATVHIQVNDMNEYSPVFKDKSYKATVIEGKKYDSIL
KVEAVDADCSFQFSQICSYEIVTPDVPFTIDKDGNIKNTEKLNYSKERMYKLTVTAYDCG
KNRASEDVLVKINIKPTCKPSWQGFNKRIEYEPGTGSLALFPSMHLETCEEPITSIQASI
MLETNHIGKGCDRDTYSEKSLHKLCGASAGTVDLLPAPSNSANWTVGLPTDNGHDSDQVF
EFNGTQAIKVPEGVVSTTLKEPFTISVWMRHGPGGREKETILCNSDKTEMNRHHYSLYVH
NCRLVLLLRQEPTESENYKPAEFHWKLDQVCDKEWHHYVLNIEFPAVTLFVDGATFEPFL
VTEDYPLHASKIETQLTIGACWQDLSGHDNDTETLSEPLTGGSALMTQYFRGNLAGLMIR
SGKLENKKVIDCLYTCKEGLDVQLPEEVASAVKVEFNPNQSSLTLEGDDIESFEKVMQHI
SYLNSRQFPTPGIRHLRVTTTVKCFNEETCISVPDSEGYVMVLQPEEPKISLSGIDHFAR
GAVEFESTEGITLFPELRIVSTITREVEVEAETETDGEDDPTVQETVVSEEIMHNLDTCE
VTVVGDELNGDHESLEVDLAQIQQRALEMSSSNVGMVITGVNSMANYEQVLHLIRYRNWH
TEALFDRKFKLVCSELNGRYISNEFKVEVNVIHTANPMDHANNAMVQPQFINQVQHASVD
LSGHNLANTHQASVVPSAATIVIVVCVSFLVFMIILGVFRIRAAHQGTMRDQEHGKENEM
DWDDSALTITVNPMETYEDQHSSEEEGDEEEEESEDGEEEDDITSAESDSSEDEGGEQED
QQGSSRQQQLEWDDSTY
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgcggatccgcggggtgaaaccttccgcttctgcggtagctctgcttttaggactatta
tgcgcggtggaggcagccaaagtaaataagcacaagccatggattgagaacacgtatcat
ggtatcgtaacggaaaatgatgacaaagttctcctggaccctccgctgatagccttggat
aaagatgccccgctgcgctatgcagagagttttgaggtgaccttcaccaaagaaggggag
atctgcggcttcaggatccacgggcagaacgtaccgttcgaagcggtggtgttggataag
tctactggcgagggtgtgatccgggccaaagataaactggattgtgagctgcaaaaggag
catactttcaccatccaggcctatgactgtggagaaggacctgatggcggcaacatgaag
aaatctcacaaggctaccgtccacatccaagtgaatgacatgaatgagtattcaccggtg
ttcaaagacaagtcctacaaagccacagtgatcgagggcaaaaagtatgacagcatcctg
aaggtggaggctgtggacgctgactgctctttccagttcagtcagatctgcagctatgag
attgtcaccccggatgtgccctttaccattgacaaggatggcaacatcaagaacacagag
aagctgaactacagcaaggaacgcatgtacaaactcactgtgaccgcatatgactgcggt
aaaaaccgggcatctgaggacgttcttgtgaaaatcaacatcaagccgacctgcaaacca
agctggcaaggatttaataaaaggattgaatatgagcctggtacaggaagtctagccctg
ttccccagcatgcacctggagacctgcgaggagccaatcacctccattcaggccagcatc
atgctggagactaatcacatcggcaagggttgtgaccgcgacacatactccgaaaaatcc
ctgcacaagctgtgcggtgccagcgctggcactgtggatctgttgcctgctcccagcaac
tctgccaactggactgttggcttgcccactgacaacgggcatgacagcgaccaggtgttt
gagtttaatggcacccaggccatcaaggtccctgagggtgtggtgagcaccaccctgaaa
gagcccttcaccatctccgtgtggatgagacacggacctggaggcagggagaaggagacc
atcctctgcaactctgacaagaccgagatgaacagacaccactattccctgtacgtacac
aactgtcgtcttgtgctgctgctgcgtcaggaacccaccgaatcagagaactacaaacct
gctgaattccactggaaactcgatcaagtgtgtgataaagaatggcatcactacgtgttg
aacattgagttcccagcagtgactttgtttgtggatggtgccacctttgagcccttcctg
gtcacggaggattaccctctgcatgcctctaagatcgaaacccagctcaccatcggcgcc
tgctggcaagacctctcaggacatgacaatgatactgagactctctcagagcctttgaca
ggtggcagcgctctcatgactcagtacttcaggggaaacctggctggactcatgatcaga
tctggcaaactggagaacaagaaagttatcgactgcctctacacctgcaaggaaggtctt
gatgtgcagcttccagaggaagtagcctctgctgtgaaggtggagtttaaccccaaccag
tcctcgctgacgctggagggagatgacattgagagttttgagaaggtcatgcagcacatc
tcctacctaaattcccggcagttccccaccccaggaatccgccatctgcgtgtcaccacc
actgtcaaatgcttcaatgaggagacgtgcatctctgtgcctgactctgaaggctacgtg
atggtcctccagccagaggagccaaagatcagcctcagtggaattgaccattttgcccgt
ggagcggttgaatttgagagcacggagggcattacgctcttccctgagctgcgcatcgtc
agcaccatcacccgtgaggtggaggtggaagctgagaccgagacagacggcgaggatgac
ccaacagtacaagagacggtggtatctgaggagatcatgcataacttggacacgtgtgag
gtgactgtggtgggagatgaactaaacggagatcatgagagtttggaggtggatctggcc
caaatccagcagagagctctggagatgagctcttccaacgtgggcatggtcatcacaggg
gttaacagcatggcgaactatgaacaggtcctgcatctgatccgctacaggaactggcac
acagaggctctgtttgacaggaagtttaaacttgtctgctctgaactcaatggccgctac
atcagcaatgaattcaaagtggaggtcaacgtgatccatacggccaaccccatggatcat
gctaacaatgctatggtacagcctcagttcatcaaccaagtacagcatgcttcagtggac
ctgtctggacacaacctggcaaacacccatcaggcctcagttgttcccagcgcggccacc
atcgttattgttgtgtgtgtgagcttcctggtgtttatgatcatccttggcgtcttccgg
atccgtgctgcccaccagggcacaatgagggaccaggaacacggcaaagagaacgaaatg
gactgggatgactctgccctcaccatcaccgtcaacccaatggagacttacgaggatcag
cacagcagcgaagaggaaggagatgaggaagaggaagagagcgaggatggagaggaggaa
gatgacatcactagcgcggagtcagacagtagtgaggatgagggtggcgaacaggaagac
cagcagggatcgagcagacagcagcagctggagtgggacgactccacctactga
DBGET
integrated database retrieval system
