Carassius auratus (goldfish): 113065602
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Entry
113065602 CDS
T07313
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113065602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113065602
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113065602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
GTP_EFTU_D4
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
113065602
NCBI-ProteinID:
XP_026092768
Ensembl:
ENSCARG00000068149
UniProt:
A0A6P6M851
LinkDB
All DBs
Position
48:complement(5347301..5374813)
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AA seq
682 aa
AA seq
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MSRHRNVRGYNYDEDFDDDDMYGQSVEDDYCISPATAAQFIYSRQDSRQARHVETLEEAE
YEEEEEMPTSPTVASTLDPLQQGRLYTCLDQMRAVLGDSIPDSTLTQAALKHDCDPHRAL
DFVLTEENTSTHAPPARTNSQPEPITTAAPQKAKAREAPESRVEAEVVPKVARMTVSGKK
QTMGFDVRSAEENGIGAPSVRRGPSPEVTTPPAIENLSKPSAVNEDSTAPTPTRPTGKSK
QPLNIRAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKA
GKASFAYAWVLDETGEERDRGVTMDVGMTKFETDSKVITLMDAPGHKDFIPNMITGAAQA
DVAVLVVDASRGEFEAGFEAGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEII
SKLGHFLKQAGFKDSDVFYIPTSGLSGENLTTRSKAADLTAWYTGPCLLEQIDAFKPPQR
SVEKPFRLCVSDVFKDQGSGFCVTGKIEAGFIQTGDKLLAMPPNETCTVKGITLHDEALD
WAAAGDHVSLTVTGMDIIKINVGCIFCDPKEPIRACTRFRARILLFNIEVPITQGFPVLL
HYQTVSEPATIRKLVSVLHKSSGEVLKKKPKCLSKGQNAVVEIQTQRPVALELYKDYKEL
GRFMLRYVGSTIAAGVVTEIKE
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcacaggaatgtccgaggttataactacgacgaagactttgatgatgatgac
atgtacgggcagtcagtggaagatgactactgcatctctcctgccactgccgcacagttt
atctattcacgtcaagactcgaggcaggctcgacatgtagaaactctggaagaggcagaa
tatgaggaggaagaggagatgcccacctctcccactgttgcaagcacactagacccacta
cagcaaggtcggttgtatacttgtttggatcagatgagagccgtgctgggggattcaatt
ccagactccacattaactcaggcagctctgaaacatgactgtgaccctcacagagccctt
gattttgtactaactgaggagaacaccagtacacacgcccctccagccagaaccaactca
cagcccgagcccatcaccacagctgcaccacagaaagctaaagcacgggaggctccagag
agtcgtgttgaagcagaggtcgtcccaaaggttgcccgcatgactgtgtcaggcaagaag
cagaccatgggctttgatgtgcgaagtgcggaagaaaatggcattggtgccccatcagtt
cgaagagggccgagtccagaggtcaccactccaccagccatagagaacctatccaaacca
tcagctgtgaatgaagactctactgccccaaccccgactcgaccaactggaaagagcaaa
cagccgctcaacatccgtgctgaactggagaagagacaaggaggaaaaccgttactcaac
ctggtggtcatagggcatgtagatgctggtaagagcactctcatgggtcatctcttatat
ctgctagggaacgttaataagagaaccatgcataaatatgagcaggagtccaagaaagct
ggcaaggcctcatttgcttatgcgtgggtactggacgaaacaggagaggagagagacaga
ggagtgaccatggatgtgggcatgaccaagtttgagactgactcaaaagttattactctg
atggacgcaccaggacacaaagacttcattccgaacatgatcacaggggcagcccaggca
gatgtggctgtgttagtcgtggatgccagccgtggggagtttgaggccgggttcgaggct
ggggggcaaacccgtgagcacggcctgcttgttcgatctcttggagtcacacagcttgct
gttgctgtcaacaagatggaccaggtgaactggcagcaggagaggttccaggaaatcatc
tcgaagctcggtcactttctgaagcaggctggttttaaggattccgatgtgttttacatc
cctaccagcggcctatcaggagagaatctgaccactaggagtaaagctgcagatcttaca
gcctggtacactggcccatgcctactggaacagatagatgcatttaaaccaccccagagg
tccgtggagaagccattcaggctttgtgtctcagacgtcttcaaagatcagggctctgga
ttctgtgtgactgggaagattgaggctggcttcattcagacaggagataaacttctggcc
atgcctcctaatgagacctgtactgttaaaggcatcactcttcatgatgaagctttagac
tgggcagctgctggtgatcacgtcagtctaactgtaactggcatggacatcatcaaaata
aatgttggatgtatattctgtgatcctaaagagcccatcagagcctgtacaagattccga
gcaagaattctactctttaatatagaagttcccatcacacaaggcttcccggtactgtta
cattatcagactgtgagcgaaccagccactattaggaagttagtcagtgtattacacaag
agcagtggagaagttctcaagaagaaaccaaagtgtttgagtaaaggacagaacgctgtg
gtggagattcagacacagaggcctgtggctctggagctctataaggactataaagaactg
ggacgcttcatgctgagatatgtgggctccaccattgctgctggagttgtcacagagatc
aaagagtaa
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