Carassius auratus (goldfish): 113065692
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Entry
113065692 CDS
T07313
Name
(RefSeq) ATP-dependent RNA helicase DDX19A-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113065692
03015 mRNA surveillance pathway
113065692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113065692
Enzymes [BR:
caua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113065692
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113065692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
113065692
NCBI-ProteinID:
XP_026092944
Ensembl:
ENSCARG00000066542
UniProt:
A0A6P6M8Q4
LinkDB
All DBs
Position
48:complement(7312910..7318983)
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AA seq
474 aa
AA seq
DB search
MSTDSWALSVDEQESTVKSVGKLRIKEAGDANIHQNDGDGDKSDEEEKEDRATQSLLNKL
IRSNVVNNTNQVEVLQRDPNSPLYSVKTFEELRLKPQLLKGVYEMGFNRPSKIQENALPM
MLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPSLKWPQCLCISPTYELALQTGKVIEQM
GKFYSEVKLAYAVRGHKMDRGVKVKEQIVIGTPGTVLDWCVKLKFIDPKKIKVFVLDEAD
VMIATQGHQDQSIRIQRMLPKGCQMLLFSATFEDSVWKFAERVVPDPNIIKLKREEETLD
TIKQYYVLCNSKEDKFNALCNIYGAITIAQAMIFCHTRKTANWLAGQLSKEGHQVALLSG
EMVVEQRAAVIERFRDGKEKVLITTNVCARGIDVEQVSVVINFDLPLDKDGNPDNETYLH
RIGRTGRFGKRGLAVNMVDSQRSMEILKTYEKHFNKKIGRLDTDDLDEIEKIGN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgactcgtgggctctatctgtggacgaacaagagtctacagtcaagtctgtt
gggaaattgaggattaaggaagcgggagatgcaaatatacaccagaatgatggtgacggt
gacaaatccgatgaagaagaaaaagaggacagagccacacagtctctcctaaacaagctg
ataagaagcaatgtggtcaacaacaccaaccaagtggaggttcttcagagggacccaaac
tcaccactgtattcagtcaagaccttcgaggagctgagactgaaacctcagttgctcaaa
ggcgtctatgaaatgggctttaacagaccttctaaaatccaagagaatgcccttcccatg
atgctcgccgaaccacctcagaatctgatcgctcagtctcagtctggcactggtaaaacc
gctgccttcgtgctggccatgctcagtcatgtggacccaagcttaaaatggcctcagtgt
ttgtgcatttctcccacatatgagctggctctgcagacgggtaaagtcatcgaacagatg
ggcaagttctattcggaagtcaaactggcatatgctgttcgtggacataagatggatcgt
ggcgttaaggtcaaggagcagatcgtcatcggcacacctgggacggttctggactggtgc
gttaagctgaagttcattgacccgaaaaagatcaaagtgtttgttctggacgaggctgat
gtgatgatcgccacacagggacaccaggaccagagcatccgcattcagagaatgctgccc
aaaggctgccagatgttacttttctctgccacctttgaggactccgtgtggaagtttgcc
gagcgggtcgtgccagatcccaacatcatcaagcttaaacgtgaagaggagaccctggac
actatcaagcagtactacgtgctctgcaacagcaaggaggacaagttcaacgcactctgt
aacatctacggagccattacaatcgcacaagctatgatcttctgtcacactcggaaaaca
gccaattggcttgccggccagctgtctaaagagggccaccaggtggcgctcctcagtggg
gaaatggtagtcgagcagagagctgcagttattgaacgttttagagatggaaaggagaaa
gttctcatcactactaatgtctgtgcaagaggtattgatgttgaacaagtatcagtggtg
atcaactttgaccttccactggacaaagacggcaatccagacaatgaaacctacctccac
cggatcggcagaactggacgttttggtaagagaggacttgctgtcaacatggtggacagt
cagcgcagcatggagattctcaagacatatgaaaagcatttcaataagaaaattgggaga
ctggacacagatgatcttgatgaaattgaaaaaatcggcaactga
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