Carassius auratus (goldfish): 113065985
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Entry
113065985 CDS
T07313
Name
(RefSeq) short transient receptor potential channel 1-like
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113065985
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113065985
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
113065985
NCBI-ProteinID:
XP_026093303
Ensembl:
ENSCARG00000064882
UniProt:
A0A6P6M9M3
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Position
49:447419..492823
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AA seq
797 aa
AA seq
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MHISALPYSLSVIMAALYQGTDSSSPDKYMALKDVREVKEETTLDEKLFLLACEKGDYYM
VRRLLEEKRHGELNINCVDVLGRDAVTISIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHQPRRSSKPSIAKLIQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNVKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELST
DLKELSLVEVEFRNDYEKLARQCKMFAKDLLAQARNSRELEVILNHTSSEDHIDKRGLLE
ERMNLSRLKLAIRYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKILYVLSVALMWP
LLSICYLLGPRSRVGQVIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEDKKNTMGPPLEL
IDYFLILWIIGMVWCDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHSKFKN
VGEEARKNWDAFHPLLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLISFTIGLTQLYGKDKDLSSTKNITKDCEGIFCREQSSDTFHTFMGTCYALFW
YIFSLAHVALFVTRISYTDELRPFVGALIVGTYNIVVVIVLTKLLVAMLHKSFRQIANHE
DKEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLVISLSKWICSHTSTGKVKRQNS
LKEWRNLKQKRDENYQKIICCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMR
DLLGFRTSKYAMFYPRS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgctttgccgtactctctctccgttataatggctgctctatatcagggc
acggactcgtcttctccggataaatatatggcgttaaaagacgtcagagaggtgaaggag
gagaccactctggacgagaagctctttctgctggcctgcgagaagggagactactacatg
gtgagaagacttctggaggagaaacgacatggtgaattaaacattaactgtgtagatgta
cttgggagagatgcggtcaccatttcaatcgaaaatgagaatctagacattttgcagttg
ctcttggaacatggctgccaggccacagatgcattattagtggctattgattcagaagtg
gtaggagcagttgacatcctgctaaaccatcagcccaggcgttcctccaagccttctatt
gcgaaattgattcagcgcattcaaaacccagagtattccaccaccatggatgttgctcca
gtaattcttgctgcccaccggaacaattatgagattttgacaatgctgttaaagcaagac
atctctctaccccgaccccatgctgtagggtgcgagtgcaccctctgtaatgtgaaaaac
aagaaggacagtcttcgtcactcaaggtttcgtctagatatctaccggtgcctcgccagc
ccatccttgatcatgcttacagaagaagaccccattctgagagcattcgagctcagcact
gatctgaaagagctgagcctggtggaagtggagtttcggaatgattatgaaaaacttgcc
aggcagtgcaagatgtttgccaaggaccttctggctcaggcccgcaactctcgtgagctg
gaggtcatactgaaccacacatccagtgaggaccacatagacaagagaggcttgctggag
gaacgcatgaacctcagtcgcctcaaactggccataagatacaaccaaaaggagtttgtt
gcccagtccaattgtcagcagttcctgaatacggtgtggttcggtgagatggcgagctac
cgccgcaagcacacgtgcttaaagatcctgtatgttttgagtgtggcgctgatgtggcct
ctgctgtccatctgttacctgctgggaccccgttctcgagtgggccaggtcatccacaca
ccctttgtcaagttcatcatccatagtgcctcctacttcaccttcctgctccttctaaac
ctctactcactggtctacaacgaggataagaagaacaccatgggtccgcctttggagttg
atagactactttctcattctctggatcataggcatggtgtggtgtgatgtgaaacgtctg
tggtatgaaggattggaggacttcctggaagagtcgcggaaccagctgagttttgtcatg
aactcgctttatttggccacttttgccctaaaagtggtggctcacagcaagtttaaaaat
gttggggaagaggcaaggaaaaactgggatgcatttcatcccctcttggttgctgaaggt
ctttttgcattcgccaatgttctgagctatctccgtctcttcttcatgtacaccaccagc
tccatcttggggcctttacagatctccatgggccagatgctacaagagtttgggaagttt
cttggcttattcctgctcgtactcatctctttcaccattggcctgacacaactgtatgga
aaagacaaggacctctccagcaccaaaaatataaccaaggactgtgagggcatcttctgt
cgagagcagagcagcgacacctttcacacgtttatggggacatgctacgcgctcttctgg
tacattttttccctggcacatgtggctctgtttgttacaaggatcagctacacagatgag
ctgcggccgtttgttggtgcgcttatcgtcggtacctacaacattgttgtggtcattgtt
ctcactaaactcctggtggccatgctgcataagagcttcagacagattgctaaccatgaa
gataaggagtggaagtttgccagggccaagctgtggctcagctactttgatgataagtgc
acactgcctccacctttcaacatcctcccctcgcccaagactgtgtgctacctggtcatc
agcctgagcaaatggatctgttcacacacttccacaggcaaggtcaagagacagaatagc
ctcaaggaatggagaaacctgaagcagaaaagagatgagaactaccagaagattatatgc
tgtcttgttcaccgttacctgacctccacaaggcagaagatgcaaagcacagaccaggcc
acggtagagaacctcaatgatctgcggcaagacctctccaagtttcgcaatgaaatgagg
gaccttttgggcttccgcacttccaaatatgccatgttttaccccagaagctaa
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