Carassius auratus (goldfish): 113066086
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Entry
113066086 CDS
T07313
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113066086
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113066086
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113066086
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
113066086
mRNA cycle factors
Stress granule specific factors
113066086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
113066086
NCBI-ProteinID:
XP_026093495
Ensembl:
ENSCARG00000045424
UniProt:
A0A6P6M9X2
LinkDB
All DBs
Position
49:complement(5935152..6066522)
Genome browser
AA seq
678 aa
AA seq
DB search
MAQVKVQTSAPLSGPGLTAVAPAVAMPSPGALGLQPTINGTVPATTPTCPSPASGFVDST
VPASPSGPPQENMANPKEKTPMCLVNELARFNRIQPQYKLLNENGPAHAKIFTVQLCLGN
QVWESEGSSIKKAQHSAATKALTESVLPRPLPRSPKADCNSNPGSITPTVELNGLAMKRG
EPAIYRPLDPKPIPNYRANYNFRGMFNQRYHYPVPKVFYVQLTVGNNEFIGEGRTRQAAR
HSAAMKALQALKNEPIPERPPQCSEEKIETEENSDVSKSEISLVYEIALKRNLPVIFEVL
KESGPPHMKSFLTRVTVGEFSAEGEGNSKKLSKKRAALSILLELKKLPVLPVVEKPKVHY
KKRPKTILKTGPEYGQGMNPISRLAQIQQAKKEKEPEYMLLSERGMPRRREFIMQVKVGT
EVTTGTGPNKKVAKRNAAEAMLLQLGYKASTPLQNTLEKMDNKGWNGQRAAFPETTTNTQ
KGILHLSPDVYQEMEASRNKGVSGAPGNYLTPKDNGQGSTGSFYTPSVGSTAAIARELLL
SGTSPTAEALILKGKAPALACGSIQPSQQLEYLAHIQGFQVQYSDRQTDKEFMTYLTLSP
VQMTFHGIGSSIPASHDQAALSALKQLSEQGLDPVDGPIKVENGSCDIQVKRLAERTDSK
PTNSGTTAQDCKDSKAVV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtgaaagtgcagacatcagcccccttgtctggacctggcctgaccgccgtt
gcgcccgctgtggccatgcccagcccaggagctctgggtctgcagcccaccatcaatggc
acagtgccagccacaacgcccacctgccccagccctgcctctggctttgtggactccact
gtaccagccagcccgtcaggccctcctcaagaaaacatggcaaaccctaaagagaaaact
cccatgtgtttggtgaatgagttagcccgtttcaacaggattcaacctcaatacaagttg
ctgaatgagaacgggccagcacatgctaagatcttcacggtgcagctgtgcttggggaac
caggtatgggagtcagaaggcagcagcatcaaaaaggctcagcactccgcagctaccaag
gccctgacagagagcgtcctcccccggccgctgcctcgctcacctaaagccgactgcaac
agcaacccaggcagcatcactcctacagtggagttgaatggcttggccatgaagcgaggg
gagccagccatctacagacccctggaccccaaacccattcccaactacagagccaattac
aactttagaggaatgttcaaccagaggtaccattacccagtgcctaaggtattttatgtg
cagctgacagtggggaacaacgagtttatcggagaggggcggactcgccaagctgcccga
cacagtgcagccatgaaagcccttcaagccctgaagaacgaacccattccagagagacca
cctcagtgttcagaggagaagatagaaacggaggagaacagcgatgtcagcaaatccgag
atcagcctggtctacgagatcgcccttaagaggaacctgcctgttatctttgaggtgctg
aaggagagcggacccccgcacatgaaaagcttcctcacacgtgtaacggtgggagagttt
tcagccgagggtgaggggaatagcaagaaactttccaaaaagagagcggccctctccatc
ctactggaactgaagaaactgccagtccttcctgttgtggagaaacccaaagtgcattac
aagaagcggcccaagaccattttaaagacagggccagagtatggacagggcatgaaccct
attagcagactggctcagattcaacaggccaaaaaggagaaggagcccgaatacatgctg
ctttcagagagaggaatgcctcgccggagagaattcatcatgcaggtgaaagtcggtacc
gaggtgaccacaggaactggtcccaataagaaagtggccaagcgcaatgcagctgaggcc
atgctgcttcaactgggctacaaggcatctacaccattacagaacactctggaaaagatg
gacaacaaaggctggaatggacaaagggctgcttttcctgaaacaacgaccaacacccaa
aaaggaattcttcacctctccccagatgtttatcaagaaatggaagcgagccggaataag
ggagtctctggtgcccctggaaactacctgacacccaaagacaatggtcaagggtccaca
gggtcattctacaccccgtcggtgggcagcaccgcagccattgcacgagagctactgcta
agcgggacgtcgcccactgctgaggccctgatcctgaagggaaaagcacctgctttggcc
tgtggctctattcagccttcccagcagctggagtacttagcccacattcaaggcttccag
gtgcaatactctgatcggcaaactgacaaagagttcatgacctacctgaccctctcacct
gtgcagatgactttccacggcattgggagctccattccagctagccatgaccaggctgct
cttagtgccttgaaacagctgtcagaacaaggactggaccctgtggatggaccaatcaag
gtagaaaatggatcatgtgacatacaagtgaaacgtctagccgagaggacggacagcaaa
ccgactaactcaggcaccactgctcaggactgcaaggattcaaaggccgtcgtctag
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