Carassius auratus (goldfish): 113066201
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Entry
113066201 CDS
T07313
Name
(RefSeq) tripartite motif-containing protein 55-like isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113066201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113066201
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113066201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
Sina_RING
DUF5799
FliS
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
113066201
NCBI-ProteinID:
XP_026093743
Ensembl:
ENSCARG00000053013
UniProt:
A0A6P6MB31
LinkDB
All DBs
Position
49:complement(11084342..11091293)
Genome browser
AA seq
369 aa
AA seq
DB search
MDSLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQSSNPYLPTRGGTGASGGRFR
CPSCRHEVVLDRHGVYGLQRNLLVENIIDMYKQENISSRPSPERKVDQPVCEVHEDEKIN
IYCLTCAVPTCSMCKVFGSHKDCEVAPLNSIYQTQKTELSDGIAMMVGNNDRIQGIISQL
EETCRTIEDNGRRQKSKVCEKFDHLYTILEDRKTQMNLKVNAEQEEKLNYIHGLTRKYGD
HLESMTKIMETGIQTMEEPEMAVFLQNAKPLLQIIAEASNTSHLEKVEHGYENMDHYSVS
FKKEGRALQNIDFARADDDEEEEDEDELGVDVDGRAGQTTSGEGDSLKEALPPLLPPQPM
STCKPATSS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggacagcctggagaagcagcttatttgtcccatttgtctggaaatgttcacgaaaccg
gttgtgattcttccgtgtcaacacaatctttgccggaaatgtgccaatgacattttccag
tcctcaaatccataccttcccaccagaggaggcacaggggcatcaggtggccgtttcagg
tgtccatcctgcaggcatgaagttgtgttggaccgccatggggtctacggtctgcagaga
aaccttctggtggaaaacatcattgacatgtacaaacaggagaacatcagcagcagacct
tctccagagaggaaggttgaccagccagtgtgtgaagtccatgaggacgagaaaatcaac
atttactgcctgacctgcgccgttcccacttgttctatgtgtaaagtgttcggctcacat
aaagactgtgaagtggcccctcttaacagtatttaccagacgcaaaagacagagctctcg
gatggaatagcaatgatggtgggcaataatgacagaatccaaggcatcatcagtcagctg
gaggagacctgcagaaccatagaggataatggcaggcgacaaaaatccaaggtgtgtgaa
aagtttgaccatttgtacaccatcctggaagacaggaagacacagatgaacctgaaagtg
aacgctgaacaggaagagaagctgaattacatccatggcctcacgaggaagtatggagat
catctggagtccatgaccaaaatcatggagacaggaatccagacaatggaagaacctgag
atggctgttttcttacagaatgccaaacccctcttgcaaataattgcagaagcatcaaat
acctcgcatctggagaaagtggagcatggctatgagaacatggatcattactctgtgagc
ttcaaaaaagagggcagggccctacaaaatatcgacttcgccagagcagatgatgatgaa
gaggaggaagatgaggatgagctgggtgtcgatgtggacggccgggcagggcagacaacc
tcgggagaaggggattcactgaaagaagcccttccgccccttcttcccccacaacccatg
agcacatgcaaacccgccacatcatcataa
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integrated database retrieval system
