Carassius auratus (goldfish): 113066371
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Entry
113066371 CDS
T07313
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113066371
09122 Translation
03013 Nucleocytoplasmic transport
113066371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113066371
03041 Spliceosome [BR:
caua03041
]
113066371
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
113066371
Spliceosome [BR:
caua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113066371
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF2542
Motif
Other DBs
NCBI-GeneID:
113066371
NCBI-ProteinID:
XP_026094069
Ensembl:
ENSCARG00000065771
UniProt:
A0A6P6MC20
LinkDB
All DBs
Position
50
Genome browser
AA seq
575 aa
AA seq
DB search
MYQQHNPLKAKQRVDVLHLQLQNLLYEVMHLQKEIGKCLEFRSQHEEIELVSEEEFFQEA
PAEISRPHVTRDDQHQLTLARLDWELEQRKRLAEQYKMSLARKEKIQKAIEQKREYLSSL
QPGLQNIMQASLPVQEYLAIPFEHMQKQAEVARHLPPPLYVLLVQAGAYGQACDKNLSVS
IRGDVDEAKALSRPPEDSQDDESDSDTEEEQQNTKRRRATSGVQLDDKRKEMLRRHPLSL
CVDLKCKDGSVLHLFFYYLMNLNILTVKTKVSTTADLSGAVSAGELLNSESLLNCLYASD
HGKETPNPANRYQFDKVGITTFGDYVSDLGHPYVWVQKLGGLQFSSGGAQSGLTGSALSA
SHMERTMKLLRGRLQARLALHKQFSSLEHSIIPVSSECQHLFPAKVVSGLMRWTLMSHQE
FTELGFVQHVLKAGLVHETDLFFMAAVERGTARLLAAVVMNPRYPEVAPLFSLSLHWKGE
RSGRTDDNLRAMESEVNVFRSELQGPRPGLQLLTNQIQRLCVCLDVYLETESQVCDGSEG
PKEFPREKMCLRTARGPSRLKPFKYNHPQGFFSHR
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaacaacacaatcccctgaaggcaaagcagcgagtggatgttcttcatctgcag
ctgcagaatctgttgtatgaggtcatgcacctgcagaaggagatcggcaaatgtctcgag
ttcaggtctcagcatgaggagatcgagctggtcagtgaagaggagttttttcaggaggct
ccggctgagatctcacgccctcatgtgacccgtgatgaccagcaccagctcacgctcgcc
cgcctggactgggaactagagcagaggaagagactggcggagcagtataagatgtctctg
gctagaaaggagaagatccagaaagccattgagcagaagagagaatatctgagcagcctt
cagcctggactgcaaaacatcatgcaggcgtctctcccagtgcaggagtatctggcgatc
ccgtttgagcacatgcagaagcaggccgaggtcgcccgtcacctgccgccccctctgtac
gtgctgttagtgcaggcgggtgcgtacggacaggcttgcgacaagaacctgtccgtgagc
atcaggggagatgtggatgaggccaaagctctctccaggcccccggaggactcacaagat
gatgaaagtgattcggacactgaagaggagcaacagaacacaaagcgccggcgcgcgact
tcaggtgttcagctggatgacaagcgtaaagagatgctgagacgccaccctctctctctc
tgcgtggacctcaagtgtaaagacggcagcgtcctgcatctgtttttctattatctcatg
aatctcaacatcctgacggtgaagaccaaggtttccacgactgcggatctgtccggagcc
gtcagcgctggagagctgctgaactctgagagtctgctgaactgtctttatgcgtccgat
cacggcaaagagacgcccaaccctgccaaccgctaccagtttgataaagtcgggatcact
acgtttggggattatgtgtcggatctcggacatccgtatgtttgggtgcagaaactgggc
ggcctgcagttctcctctggtggtgcacagtcgggactgacaggcagcgctctgagcgcc
agtcacatggagaggaccatgaaactactgcgaggaagactgcaggctcgactggcccta
cacaaacagttcagctcactggagcacagcatcatacccgtctccagcgagtgccaacat
ctgtttcctgctaaagtggtttctggtctcatgcgctggaccctgatgagccatcaggag
ttcactgagctgggcttcgtgcagcatgtgttgaaggcgggtctggtgcatgagaccgat
ctgttcttcatggcagctgtagagagaggaacagctcgtctgctggctgctgtggtgatg
aacccgcgttaccctgaggtcgcgccgctcttctctctctcgctgcactggaaaggagag
cgcagcgggcgcaccgatgataacctgcgggcgatggagagcgaggtgaacgtgttccgc
tccgagctgcaggggccacgtccgggtctccagctcctgaccaatcagatccagcgcttg
tgtgtgtgtctggatgtgtatctggagacggagagtcaagtgtgtgacgggtctgaggga
cccaaggagtttcctcgagagaagatgtgcttgcgcactgccaggggtccgagccgtctg
aagcccttcaagtacaaccatcctcagggcttcttcagtcaccgctga
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