Carassius auratus (goldfish): 113066567
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Entry
113066567 CDS
T07313
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113066567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113066567
03041 Spliceosome [BR:
caua03041
]
113066567
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
113066567
Spliceosome [BR:
caua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113066567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF2542
Motif
Other DBs
NCBI-GeneID:
113066567
NCBI-ProteinID:
XP_026094245
Ensembl:
ENSCARG00000068314
UniProt:
A0A6P6MC31
LinkDB
All DBs
Position
50:complement(1032835..1044600)
Genome browser
AA seq
724 aa
AA seq
DB search
MSSDAVKKRKPKVIRNESGTPETKRGRAEGDQLSAVSSLVKFRKVRLRQVQVTYPAGPHL
IGQRKPFTVKNQDVRVYNEEVELEVRDPQQDYMLYKNTCAALAKLMAEIQELKAGGAKVG
SVEIEERRTQCSVHFITLKKLNRLAHMRLKKGRDQTHEAKQRVDVLHLQLQNLLYEVMHL
QKEIGKCLEFRSQHEEIELVSEEEFFQEAPAEISRPHVTRDDQHQLTLARLDWELEQRKR
LAEQYKMSLARKEKIQKAIEQKREYLSSLQPGLQNIMQASLPVQEYLAIPFEHMQKQAEV
ARHLPPPLYVLLVQAGAYGQACDKNLSVSIRGDVDEAKALSRPPEDSQDDESDSDAEEEQ
QNTKRRRATSGVQLDDKRKEMLRRHPLSLCVDLKCKDGSVLHLFFYYLMNLNILTVKTKV
STSADLSGAVSAGELLNSESLLNCLYASDHGKETPNPANRYQFDKVGITTFGDYVSDLGH
PYVWVQKLGGLQFSSGGAQSGLTGSALSASHMERTMKLLRGRLQARLALHKQFSSLEHSI
IPVSSECQHLFPAKVVSGLMRWTLMSHQEFTELGFVQHVLKAGLVHETDLFFMAAVERGT
ARLLAAVVMNPRYPEVAPLFSLSLHWKGERSGRTDDNLRAMESEVNVFRSELQGPRPGLQ
LLTNQIQRLCVCLDVYLETESQVCDGSEGPKEFPREKMCLRTARGPSRLKPFKYNHPQGF
FSHR
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagacgctgtgaagaagagaaagccgaaggtcatccgaaatgaatcaggaact
ccagagaccaagcgcggtcgagcagaaggcgatcagctgagtgcagtcagttctcttgtc
aagttcaggaaggtcaggttgaggcaggtgcaggtcacgtatccagccggacctcatctt
atcggacagaggaagccgtttacagtaaagaatcaggacgtgcgtgtgtataatgaggag
gtggagctggaggtcagggacccccagcaggactacatgctgtataagaacacgtgtgcc
gctctggccaaactgatggcagaaatccaggagctgaaagctggcggcgcgaaagtcgga
agcgtggagatcgaggagagacgcacacagtgcagcgttcatttcattaccctgaagaaa
ctcaaccgcctggcacacatgagactgaagaaaggccgagaccagacgcatgaggcaaag
cagcgagtggatgttcttcatctgcagctgcagaatctgttgtatgaggtcatgcacctg
cagaaggagatcggcaaatgtcttgagttcaggtctcagcatgaggagatcgagctggtc
agcgaagaggagttttttcaggaggctccggctgagatctcacgccctcatgtgacccgt
gatgaccagcaccagctcacgctcgcccgcctggactgggaactagagcagaggaagaga
ctggcggagcagtataagatgtctctggctagaaaggagaagatccagaaagccattgag
cagaagagagaatatctgagcagccttcagcctggactgcaaaacatcatgcaggcgtct
ctcccagtgcaggagtatctggcgatcccgtttgagcacatgcagaagcaggccgaggtc
gcccgtcacctgccgccccctctgtacgtgctgttagtgcaggcgggtgcgtacggacag
gcttgcgacaagaacctgtccgtgagcatcaggggagatgtggatgaggccaaagctctc
tccaggcccccggaggactcacaagatgatgaaagtgattcggacgctgaagaggagcaa
cagaacacaaagcgccggcgcgcgacttcaggtgttcagctggatgacaagcgtaaagag
atgctgagacgccaccctctctctctctgcgtggacctcaagtgtaaagacggcagcgtc
ctgcatctgtttttctattatctcatgaatctcaacatcctgacggtgaagaccaaggtt
tccacgagtgcggatctgtccggagccgtcagcgctggagagctgctgaactctgagagt
ctgctgaactgtctttatgcgtccgatcacggcaaagagacgcccaaccctgccaaccgc
taccagtttgataaagtcgggatcactacgtttggggattatgtgtcggatctcggacat
ccgtatgtttgggtgcagaaactgggcggcctgcagttctcctctggtggtgcacagtcg
ggactgacaggcagcgctctgagcgccagtcacatggagaggaccatgaaactactgcga
ggaagactgcaggctcgactggccctacacaaacagttcagctcactggagcacagcatc
atacccgtctccagcgagtgccaacatctgtttcctgctaaagtggtttctggtctcatg
cgctggaccctgatgagccatcaggagttcactgagctgggcttcgtgcagcatgtgttg
aaggcgggtctggtgcatgagaccgatctgttcttcatggcagctgtagagagaggaaca
gctcgtctgctggctgctgtggtgatgaacccgcgttaccctgaggtcgcgccgctcttc
tctctctcgctgcactggaaaggagagcgcagcgggcgcaccgatgataacctgcgggcg
atggagagcgaggtgaacgtgttccgctccgagctgcaggggccacgtccaggtctccag
ctcctgaccaatcagatccagcgcttgtgtgtgtgtctggatgtgtatctggagacggag
agtcaagtgtgtgacgggtctgagggacccaaggagtttccccgagagaagatgtgcttg
cgcactgccaggggtccgagccgtctgaagcccttcaagtacaaccatcctcagggcttc
ttcagtcaccgctga
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integrated database retrieval system
