Carassius auratus (goldfish): 113066589
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Entry
113066589 CDS
T07313
Name
(RefSeq) neogenin-like isoform X1
KO
K06766
neogenin
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04350
TGF-beta signaling pathway
caua04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
113066589
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113066589
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113066589
Cell adhesion molecules [BR:
caua04515
]
Immunoglobulin superfamily
DCC/UNC5 family
113066589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Neogenin_C
Ig_3
I-set
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
V-set
Fn3_VIN3
Interfer-bind
fn3_SORL1
fn3_2
Unc5_NetrinR_N
NDNF
Motif
Other DBs
NCBI-GeneID:
113066589
NCBI-ProteinID:
XP_026094284
UniProt:
A0A6P6MCM6
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All DBs
Position
50:1313641..2388475
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AA seq
1405 aa
AA seq
DB search
MADPPRLLVCLASLVSLRFCAADQGSDIRGFTPFQFMVEPVDTLAVRGLPAVLNCSAASD
APVRVEWKKDGTFLNLVADDRKRQLADGSLLISTVVHSKHNKPDEGVYQCVATIDNLGTI
SSRTARLTVAGLPRFLSQPEDVSVRSGGTEMLSCEVTEDLVPFTRWERDGQPVELDSRVI
QLPGGALVISNGSQSDAGLYRCTIDGLGPAKTTEEAQLQVSTDSGVEEELETLQSPVAMA
KVAGESVLLPCVMKGFPVPVIRWTFNDRPIDESRERFAVIGGGSLQIVNLTQEDAGIYVC
QAHSGNMSSEIQAELTVHVPPRFLTRPSNTYAQESMDIIFECDVTGSPPPTVKWMKDGDT
VIPSDYFRMKQHNLQVLGLVKSDEGFYQCLAENDAGNIQASAQLIILDLDVALPSAVPSL
TDDTTDVASSASERSDPKPSAPRDVVASLVSTRFIKLTWRLPAEPHGENITYSVFYSLEG
TNRERVENTSGPGEMRVTIQNLVPDTRYTFRVVASNANGPGESSTPLTLATQPEVQVPGP
APNLQVVSVSSSSVTLSWDRPVTGHGEILTYRLFYSEKSRAEEQQVDVPAPSCTVTGLKA
FTEYSFRVVGYSRHGPGVSTEDAVVQTLSDVPSAPPLNLTLEVLNSTSIMVRWQPPPAGA
VNGDVTGYKIRFRKGPRRADAVEMWSTQLFQILQGLERGQLYSVRVSASTVNGSGPASDW
STAETFQNDLDESQVPGVPSSLQVRPLVNRIVVSWTPPGNQEVLVRGYKMGYGIGSPHAH
TVSLDYKQRFYSIDDLDPSSHYVITLKAFNNMGEGIPIYNSATTRPQTDPIDPDIDFYEL
FNNPYTPAPDPAPMLPPVGVQATVLSHDSIKVSWADNSLAKNQKITDSRYYTIRWKTNIP
ANTKHKMANTTTLFHTVTALKPNTLYEFSVMVTKSRRSSTWSMTAHGTTFESIPSSAPKD
VTVISKEGSPRIINISWQPPTEANGKITGYIIYYSTDVNAEVHDWVVEPVLGNRLTHQIQ
GLTLDTTYFYKIQARNSRGMGPMSDAVQFHSPKAEPSDEMSSDQGLQVKPGPPTPPEHGI
GSNMDKAGIRGSQEKHVLVMVVIVSVGVFTIIAVIVGAVLCTRRSNSLQKNVFVLRKRAA
CKSSAGSHKYKSSSKELSPPDLWIHHERLELKPMDKSPEPNPVLTETPIPRTAQEPSHQR
RGQETEDSRRGVRPKMMMPSHSQPVIDAHPIHSLDHLHHHHHHHYHLAPRGYLHHQISLR
APASPSSSSHTPPSAECVRNQAPAPEAPVAPGQPHTTADLQKTETLIGEEPSTHPLKSFA
VPTITVSAHTPPPYETALPSTPLGPGVKTASVGTLIRARAPMAVTVPSAPDQSESSMMLD
STDELSEEMAHLEGLMKDLNAITTD
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccccacggctgctcgtgtgtctcgcgagtctcgtctctctccggttctgc
gcggcggatcaaggttcagatattcgaggctttaccccgttccagttcatggttgaaccc
gtcgacacgctggctgtacgcggcctcccggcggtcctgaactgctcggccgctagcgac
gctccggtgagggtggaatggaagaaggatgggacgttcctgaacctggtagcggacgac
cggaagcggcagctagccgacggctctttgctcatcagtacggtggtccactccaaacac
aataagcctgacgagggggtgtaccagtgcgtggccaccatcgacaatctgggcaccatc
agcagccgaaccgcacgcctcacagtggcaggacttcctcggttcctcagtcagccggag
gatgtgtctgtgcgctcgggtggcactgagatgctgagctgcgaggtgactgaagatctg
gtcccgttcacccgctgggagagagacggtcagcccgtggagctggacagcagggtcata
cagctgcccggaggagctctggtcatcagcaacggctcccagagcgacgccggactctac
cgctgcaccatagacggcctgggaccggccaaaaccacagaggaggcacaactacaggtg
tctacagattcgggtgttgaagaagagctggagactctccagagccctgttgctatggcg
aaggttgccggggagagcgtgttgttgccgtgcgtcatgaaggggttccccgtgcctgtg
attcgctggacgtttaacgaccggccgattgacgagagccgtgagcgttttgctgtgatt
ggtggaggaagcctgcagatcgtcaacctgacccaagaggatgctgggatatacgtctgt
caggcgcacagcggaaacatgagcagcgagatccaggccgagctcacggtgcacgttcct
cctcggttcttgacgagaccctccaacacttacgcccaggagtccatggacatcatcttt
gagtgtgatgtcaccgggtcaccgccgcccaccgtcaagtggatgaaggatggagacacg
gtcattcccagtgattatttcaggatgaagcagcataacttgcaggttttgggtttagta
aaatcagatgaaggtttttatcagtgtttagcggagaacgacgctgggaacatccaggcc
agcgctcagctgatcatactggatttagacgttgcccttccttctgctgtcccttccctg
accgatgacacgactgatgtagcgtccagcgcgtccgagcgcagtgacccgaagccctcc
gccccccgtgatgtcgtggcatctctagtgtccactcgattcatcaagctgacgtggaga
cttcctgccgagccacacggggagaacatcacctactctgtgttctacagtctggaaggc
actaacagggagcgtgtggagaacaccagcggcccgggagagatgcgggtcaccatccaa
aacctcgtcccagacaccaggtacacctttcgggtggtcgcgtccaacgctaacggcccg
ggcgagagctccaccccgctaacactggccacccagccggaggttcaggtcccgggtccg
gctccgaatctgcaggtggtctctgtcagctcgtcctcggtcactctgagctgggacaga
ccggtgaccggacacggagagatcctgacctacagactcttctacagcgagaagagccga
gccgaggagcagcaggtggacgtcccggctccgtcctgcacggtgacggggctcaaggcg
tttacagagtacagtttcagggtggtggggtacagcagacacggccccggcgtctccacc
gaggatgctgtggtccagacgctgtctgacgtgccgagcgcccccccactgaacctcact
ctggaggtcctgaactcaacgagcatcatggtccgatggcagccgccccccgcaggtgct
gtgaacggagatgtgacggggtataagatacgcttcaggaaaggtccgaggagagcagac
gcagtggagatgtggagcacacagctcttccagatcctccagggtctggagagaggacag
ctgtacagtgtgagagtgtcggccagcaccgtgaacggatctggaccggcgagcgactgg
agcacagccgagaccttccagaacgacctggacgagtctcaggtcccaggagtccccagt
tctcttcaggttcgtccgctggtgaaccgaatcgtggtgagctggactcctccaggaaat
caggaggtgttagtgcgaggttataagatgggatacgggatcggcagccctcacgcgcac
acggtcagtctggattacaagcagcgcttctacagcatcgatgacctcgatcctagttcc
cattacgtcatcaccctcaaggctttcaacaacatgggcgaaggcattcccatctacaac
agcgccaccaccagaccccagaccgaccccatagaccctgatattgatttctatgaactc
tttaataacccatacaccccagcacctgaccccgcacccatgctgcccccggtgggtgtc
caggccaccgtcctcagccacgactcgatcaaagtcagctgggccgacaactcactcgcc
aagaaccagaagatcaccgactccagatattacaccatccgctggaagaccaacatcccc
gccaacaccaaacacaagatggcgaacaccacgaccctgttccatacggttacggctctg
aaacccaacacgctttatgagttctccgttatggtcaccaagagccgcaggagcagtacg
tggagtatgacggcccacgggaccacctttgagtccattcccagctctgctccaaaagat
gtgaccgtgatcagtaaagagggaagtccacgaatcatcaacatcagctggcagcctccg
actgaagccaacggcaaaatcacagggtacatcatctactacagcactgatgtgaacgct
gaggtccatgactgggtggtggagcccgtgctggggaacagactgacccatcagatccag
gggctgacgctggacaccacgtacttctacaagatccaggccagaaactccagaggcatg
ggacccatgtcagacgcggtgcagttccacagccctaaagcagaaccatcagatgagatg
tccagtgatcaagggctgcaagtcaaacccggtcccccgacccccccggagcacgggatc
ggatcaaacatggataaagcaggcatccgcggcagccaggagaagcatgttctggtgatg
gtggtgattgtgtctgttggtgtgttcactatcatcgctgtgatcgtgggagccgtcctg
tgcacacgccgctccaactccctccagaagaatgtgtttgttctcaggaagcgagcggcc
tgtaagtccagcgctggttcacacaagtacaagagttcatctaaagagctgagtcctcct
gatctgtggatccatcacgagcgtctggagctcaaacccatggacaaatcccccgagccc
aaccccgtcctgacagagacccccatcccacggaccgcccaggagccgtcccatcagaga
cggggtcaagagacggaggacagtcggaggggagtgagacccaagatgatgatgccgtcc
cactctcagcctgtgattgacgctcaccccatccattccctcgatcatcttcatcaccat
catcatcatcactatcacctggcgccgcgtggctaccttcatcaccagatcagcctgaga
gcacctgcctccccgagctcttcctcacacactcctccgtctgcagaatgtgtgaggaat
caggcccctgcacctgaagctccggtggcccccggtcagccccacactacagctgatcta
cagaagacagagactctgatcggagaagagccgagcacacacccactcaagagcttcgcc
gtgccaaccatcactgtttccgcccataccccgcccccctacgagaccgcgttacccagc
acccctctggggcctggtgtgaagacagcgtctgtcgggacattaattcgagctcgagct
ccgatggcagtaacagtccccagtgctcctgaccaatcagaaagcagcatgatgctggac
tcgacggatgaactctcggaggagatggcccacctggagggtctgatgaaggacctgaac
gccatcaccacggactga
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integrated database retrieval system