KEGG   Carassius auratus (goldfish): 113066589
Entry
113066589         CDS       T07313                                 
Name
(RefSeq) neogenin-like isoform X1
  KO
K06766  neogenin
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04350  TGF-beta signaling pathway
caua04514  Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:caua00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    113066589
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    113066589
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:caua04515]
    113066589
Cell adhesion molecules [BR:caua04515]
 Immunoglobulin superfamily
  DCC/UNC5 family
   113066589
SSDB
Motif
Pfam: fn3 Neogenin_C Ig_3 I-set Ig_2 ig Pur_ac_phosph_N FN3_DSCAM-DSCAML_C V-set Fn3_VIN3 Interfer-bind fn3_SORL1 fn3_2 Unc5_NetrinR_N NDNF
Other DBs
NCBI-GeneID: 113066589
NCBI-ProteinID: XP_026094284
UniProt: A0A6P6MCM6
LinkDB
Position
50:1313641..2388475
AA seq 1405 aa
MADPPRLLVCLASLVSLRFCAADQGSDIRGFTPFQFMVEPVDTLAVRGLPAVLNCSAASD
APVRVEWKKDGTFLNLVADDRKRQLADGSLLISTVVHSKHNKPDEGVYQCVATIDNLGTI
SSRTARLTVAGLPRFLSQPEDVSVRSGGTEMLSCEVTEDLVPFTRWERDGQPVELDSRVI
QLPGGALVISNGSQSDAGLYRCTIDGLGPAKTTEEAQLQVSTDSGVEEELETLQSPVAMA
KVAGESVLLPCVMKGFPVPVIRWTFNDRPIDESRERFAVIGGGSLQIVNLTQEDAGIYVC
QAHSGNMSSEIQAELTVHVPPRFLTRPSNTYAQESMDIIFECDVTGSPPPTVKWMKDGDT
VIPSDYFRMKQHNLQVLGLVKSDEGFYQCLAENDAGNIQASAQLIILDLDVALPSAVPSL
TDDTTDVASSASERSDPKPSAPRDVVASLVSTRFIKLTWRLPAEPHGENITYSVFYSLEG
TNRERVENTSGPGEMRVTIQNLVPDTRYTFRVVASNANGPGESSTPLTLATQPEVQVPGP
APNLQVVSVSSSSVTLSWDRPVTGHGEILTYRLFYSEKSRAEEQQVDVPAPSCTVTGLKA
FTEYSFRVVGYSRHGPGVSTEDAVVQTLSDVPSAPPLNLTLEVLNSTSIMVRWQPPPAGA
VNGDVTGYKIRFRKGPRRADAVEMWSTQLFQILQGLERGQLYSVRVSASTVNGSGPASDW
STAETFQNDLDESQVPGVPSSLQVRPLVNRIVVSWTPPGNQEVLVRGYKMGYGIGSPHAH
TVSLDYKQRFYSIDDLDPSSHYVITLKAFNNMGEGIPIYNSATTRPQTDPIDPDIDFYEL
FNNPYTPAPDPAPMLPPVGVQATVLSHDSIKVSWADNSLAKNQKITDSRYYTIRWKTNIP
ANTKHKMANTTTLFHTVTALKPNTLYEFSVMVTKSRRSSTWSMTAHGTTFESIPSSAPKD
VTVISKEGSPRIINISWQPPTEANGKITGYIIYYSTDVNAEVHDWVVEPVLGNRLTHQIQ
GLTLDTTYFYKIQARNSRGMGPMSDAVQFHSPKAEPSDEMSSDQGLQVKPGPPTPPEHGI
GSNMDKAGIRGSQEKHVLVMVVIVSVGVFTIIAVIVGAVLCTRRSNSLQKNVFVLRKRAA
CKSSAGSHKYKSSSKELSPPDLWIHHERLELKPMDKSPEPNPVLTETPIPRTAQEPSHQR
RGQETEDSRRGVRPKMMMPSHSQPVIDAHPIHSLDHLHHHHHHHYHLAPRGYLHHQISLR
APASPSSSSHTPPSAECVRNQAPAPEAPVAPGQPHTTADLQKTETLIGEEPSTHPLKSFA
VPTITVSAHTPPPYETALPSTPLGPGVKTASVGTLIRARAPMAVTVPSAPDQSESSMMLD
STDELSEEMAHLEGLMKDLNAITTD
NT seq 4218 nt   +upstreamnt  +downstreamnt
atggcagaccccccacggctgctcgtgtgtctcgcgagtctcgtctctctccggttctgc
gcggcggatcaaggttcagatattcgaggctttaccccgttccagttcatggttgaaccc
gtcgacacgctggctgtacgcggcctcccggcggtcctgaactgctcggccgctagcgac
gctccggtgagggtggaatggaagaaggatgggacgttcctgaacctggtagcggacgac
cggaagcggcagctagccgacggctctttgctcatcagtacggtggtccactccaaacac
aataagcctgacgagggggtgtaccagtgcgtggccaccatcgacaatctgggcaccatc
agcagccgaaccgcacgcctcacagtggcaggacttcctcggttcctcagtcagccggag
gatgtgtctgtgcgctcgggtggcactgagatgctgagctgcgaggtgactgaagatctg
gtcccgttcacccgctgggagagagacggtcagcccgtggagctggacagcagggtcata
cagctgcccggaggagctctggtcatcagcaacggctcccagagcgacgccggactctac
cgctgcaccatagacggcctgggaccggccaaaaccacagaggaggcacaactacaggtg
tctacagattcgggtgttgaagaagagctggagactctccagagccctgttgctatggcg
aaggttgccggggagagcgtgttgttgccgtgcgtcatgaaggggttccccgtgcctgtg
attcgctggacgtttaacgaccggccgattgacgagagccgtgagcgttttgctgtgatt
ggtggaggaagcctgcagatcgtcaacctgacccaagaggatgctgggatatacgtctgt
caggcgcacagcggaaacatgagcagcgagatccaggccgagctcacggtgcacgttcct
cctcggttcttgacgagaccctccaacacttacgcccaggagtccatggacatcatcttt
gagtgtgatgtcaccgggtcaccgccgcccaccgtcaagtggatgaaggatggagacacg
gtcattcccagtgattatttcaggatgaagcagcataacttgcaggttttgggtttagta
aaatcagatgaaggtttttatcagtgtttagcggagaacgacgctgggaacatccaggcc
agcgctcagctgatcatactggatttagacgttgcccttccttctgctgtcccttccctg
accgatgacacgactgatgtagcgtccagcgcgtccgagcgcagtgacccgaagccctcc
gccccccgtgatgtcgtggcatctctagtgtccactcgattcatcaagctgacgtggaga
cttcctgccgagccacacggggagaacatcacctactctgtgttctacagtctggaaggc
actaacagggagcgtgtggagaacaccagcggcccgggagagatgcgggtcaccatccaa
aacctcgtcccagacaccaggtacacctttcgggtggtcgcgtccaacgctaacggcccg
ggcgagagctccaccccgctaacactggccacccagccggaggttcaggtcccgggtccg
gctccgaatctgcaggtggtctctgtcagctcgtcctcggtcactctgagctgggacaga
ccggtgaccggacacggagagatcctgacctacagactcttctacagcgagaagagccga
gccgaggagcagcaggtggacgtcccggctccgtcctgcacggtgacggggctcaaggcg
tttacagagtacagtttcagggtggtggggtacagcagacacggccccggcgtctccacc
gaggatgctgtggtccagacgctgtctgacgtgccgagcgcccccccactgaacctcact
ctggaggtcctgaactcaacgagcatcatggtccgatggcagccgccccccgcaggtgct
gtgaacggagatgtgacggggtataagatacgcttcaggaaaggtccgaggagagcagac
gcagtggagatgtggagcacacagctcttccagatcctccagggtctggagagaggacag
ctgtacagtgtgagagtgtcggccagcaccgtgaacggatctggaccggcgagcgactgg
agcacagccgagaccttccagaacgacctggacgagtctcaggtcccaggagtccccagt
tctcttcaggttcgtccgctggtgaaccgaatcgtggtgagctggactcctccaggaaat
caggaggtgttagtgcgaggttataagatgggatacgggatcggcagccctcacgcgcac
acggtcagtctggattacaagcagcgcttctacagcatcgatgacctcgatcctagttcc
cattacgtcatcaccctcaaggctttcaacaacatgggcgaaggcattcccatctacaac
agcgccaccaccagaccccagaccgaccccatagaccctgatattgatttctatgaactc
tttaataacccatacaccccagcacctgaccccgcacccatgctgcccccggtgggtgtc
caggccaccgtcctcagccacgactcgatcaaagtcagctgggccgacaactcactcgcc
aagaaccagaagatcaccgactccagatattacaccatccgctggaagaccaacatcccc
gccaacaccaaacacaagatggcgaacaccacgaccctgttccatacggttacggctctg
aaacccaacacgctttatgagttctccgttatggtcaccaagagccgcaggagcagtacg
tggagtatgacggcccacgggaccacctttgagtccattcccagctctgctccaaaagat
gtgaccgtgatcagtaaagagggaagtccacgaatcatcaacatcagctggcagcctccg
actgaagccaacggcaaaatcacagggtacatcatctactacagcactgatgtgaacgct
gaggtccatgactgggtggtggagcccgtgctggggaacagactgacccatcagatccag
gggctgacgctggacaccacgtacttctacaagatccaggccagaaactccagaggcatg
ggacccatgtcagacgcggtgcagttccacagccctaaagcagaaccatcagatgagatg
tccagtgatcaagggctgcaagtcaaacccggtcccccgacccccccggagcacgggatc
ggatcaaacatggataaagcaggcatccgcggcagccaggagaagcatgttctggtgatg
gtggtgattgtgtctgttggtgtgttcactatcatcgctgtgatcgtgggagccgtcctg
tgcacacgccgctccaactccctccagaagaatgtgtttgttctcaggaagcgagcggcc
tgtaagtccagcgctggttcacacaagtacaagagttcatctaaagagctgagtcctcct
gatctgtggatccatcacgagcgtctggagctcaaacccatggacaaatcccccgagccc
aaccccgtcctgacagagacccccatcccacggaccgcccaggagccgtcccatcagaga
cggggtcaagagacggaggacagtcggaggggagtgagacccaagatgatgatgccgtcc
cactctcagcctgtgattgacgctcaccccatccattccctcgatcatcttcatcaccat
catcatcatcactatcacctggcgccgcgtggctaccttcatcaccagatcagcctgaga
gcacctgcctccccgagctcttcctcacacactcctccgtctgcagaatgtgtgaggaat
caggcccctgcacctgaagctccggtggcccccggtcagccccacactacagctgatcta
cagaagacagagactctgatcggagaagagccgagcacacacccactcaagagcttcgcc
gtgccaaccatcactgtttccgcccataccccgcccccctacgagaccgcgttacccagc
acccctctggggcctggtgtgaagacagcgtctgtcgggacattaattcgagctcgagct
ccgatggcagtaacagtccccagtgctcctgaccaatcagaaagcagcatgatgctggac
tcgacggatgaactctcggaggagatggcccacctggagggtctgatgaaggacctgaac
gccatcaccacggactga

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