Carassius auratus (goldfish): 113066599
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Entry
113066599 CDS
T07313
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03022
Basal transcription factors
caua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113066599
09124 Replication and repair
03420 Nucleotide excision repair
113066599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113066599
03400 DNA repair and recombination proteins [BR:
caua03400
]
113066599
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113066599
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113066599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
113066599
NCBI-ProteinID:
XP_026094310
Ensembl:
ENSCARG00000039425
UniProt:
A0A6P6MC96
LinkDB
All DBs
Position
50:2033468..2043412
Genome browser
AA seq
554 aa
AA seq
DB search
MASLSEEVLLVVKRVRQRKQDGTLYLMAERIAWGPEGKDRFSVSHLYADIRCQKISPDGK
AKIQLQLVLHTGESTTFHFTNESTALKDRETTKDLLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWTNRLSLSSPDHSLSINNNTNNKQEVGISAAFLADIRP
QTDGCNGLRYNLTTDIIESIFRTYPTVKQKYAENVPHNMTEKEFWTRFFQSHYFHRDRIS
TGLQDIFSECAKQDEKGLKSMVTQGVKNPMVDLLSLEDKTLDEGYGTATVPTPSNSSNKS
LRENSNCAIIKRFNHHSAMVLAAGLRKPEAPSDQVSETSSTDGNSRDSDLFQPPIKKVKL
QEAIEYDDLQGDSGRKTISLNLKKSDRYSHGPVPLQSQQYTTSQDMINSISIIQQEMRSY
KPRLTQVMSSSAASSAIISLSPGGVLMQGGGQQTINQLVPTDVQSELKHLYMAAGELLRH
FWSCFPVSTPFLEEKVIKMKSNLEKFQVTKLRPFQEKIQRQYLSSNLTGHLEEMLQAAYS
KFQAWQTRRMMRKT
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctgtccgaggaggtgttgttggtggtgaagagggtccgtcagaggaagcag
gacgggactctgtacctgatggcggagaggatcgcctggggtcccgaagggaaggaccgc
ttcagcgtcagccacctgtacgccgacatccgctgtcagaagatcagtcctgatgggaag
gcgaagatccagcttcagcttgttctccacacgggagaaagcaccacctttcatttcacc
aatgagagcaccgcactgaaggacagagagaccaccaaagacctcctccagcagctgctg
cccaagttcaagaagaaagccaataaagagctagaggagaagaacaggatgttgcaggaa
gaccccgttctgttccagctctataaggacttagtagtgagtcaggtgatcagtgctgag
gagttctggaccaatcggctgagcctgagctcacctgaccactccctctccatcaacaac
aacaccaacaacaaacaggaagtgggcatctctgctgccttcctggccgacatcagaccg
cagacggacggctgcaacggcctgcgctacaatctgaccacagacatcatcgagtccatc
ttcagaacctaccccacagtcaagcagaaatacgcggagaatgttcctcacaacatgacg
gagaaggagttctggacgcggttcttccagtcgcattacttccacagagaccggatcagc
acgggtctgcaggacatcttctccgagtgtgccaaacaggacgagaagggcctgaaatcg
atggtgacgcagggagtgaagaaccccatggtggacctgctttctctggaggataaaaca
ctagatgagggttacggcacagctacagttcccactccatcaaactcctcaaacaagtcc
ctgagagagaacagcaactgtgccataatcaaacgcttcaaccatcacagtgccatggtg
ctggcggccggcctgcgcaaaccggaagctcccagtgatcaagtcagtgagaccagcagc
actgatgggaactccagagattcagatctcttccagccgccaatcaaaaaggtaaagtta
caggaagctatagagtatgacgacctgcagggtgactccgggcgtaagaccatctctctg
aacctgaagaaatcagacagatattcccacggcccggttcctctgcagtcacagcagtac
accaccagtcaggacatgatcaactccatcagcatcatccagcaggagatgaggagctat
aaaccccgtctgacgcaggtgatgtccagcagtgcggcgagctccgccatcatatcgctg
tcacctggaggagtcctgatgcagggcggaggacagcagaccattaaccaattagtgccc
actgatgttcagagcgagctgaagcacttatacatggccgccggagagctgctccgacac
ttctggtcatgtttccccgtcagcactcctttcctggaggaaaaggtgataaagatgaaa
tctaacctggagaaattccaggtgacgaagctccgcccctttcaagagaagatacaacgg
cagtatttgagctctaatctaacgggtcacctggaggaaatgcttcaggcggcgtacagc
aagttccaagcctggcagacgcgccggatgatgagaaagacctga
DBGET
integrated database retrieval system
