Carassius auratus (goldfish): 113066712
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Entry
113066712 CDS
T07313
Name
(RefSeq) V(D)J recombination-activating protein 1-like
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
113066712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113066712
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113066712
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113066712
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_pre-RNase_H
RAG1
RAG1_ZnC2
RAG1_DNA-bd
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_UBOX
zf-RING_10
zf-RING_2
zf-RING_5
U-box
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
113066712
NCBI-ProteinID:
XP_026094472
Ensembl:
ENSCARG00000066310
UniProt:
A0A6P6MDN2
LinkDB
All DBs
Position
50
Genome browser
AA seq
1062 aa
AA seq
DB search
MEKGRWSSEDAPRASMPDELSHPKFSEWKFKLFRVRSMEKAPLPNETPVEKENQPEVAME
NSGSPGSVMKLCFGGKSKENMETAQGRVDLKLQEIDTHMNLLKCLCRLCGLSIQKAKGPS
HEVQGDLEVSSRCALRRMGCKFLNWPEVILKVFKVDVTTDMETVHPSLFCHRCWTAVMRG
GGFCSFTRTQIPDWKPHNTHCNLCFPKKSSFHRIGRKRAKPLKIAHSHPKRIKRDSSESP
GTNTAWRQTPENTGSGGQERLKLSVQRGQWVKNITQCQRDHLSTKLIPPEVPADFLHTVT
CQVCDHLLSDPVQSPCRHLFCRVCILRYSRALGQNCPTCNQHLNPSHLTRPAKFFLATLN
SIPLLCPSEGCNDWVRFDSFREHCLNHYHEKESQEEQKALEQNFDDYLPVNKGGRPRQHL
LSLTRRAQKHRLRDLKNQVKAFAEKEEGGDVKSVCLTLFLLALRAGNEHKQADELEAMMQ
GRGCGLHPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRNAEKELLPGFHQ
FEWQPALKNVSSSWDVGIIDGLSGWKTSVDDVPADTISRRFRYDVALVSALKDLEEDIME
GLRERELDDSMCTSGFTVVVKESCDGMGDVGEKHGSGPAVPEKAVRFSFTIMSISLRVEG
EDDGITIFQEQKPNSELSCRPLCLMFVDESDHETLTAILGPVVAERKAMMESRLILSVGG
LLRSFRFFFRGTGYDEKMVREMEGLEASGSTYICTLCDSTRAEASQNMVLHSITRSHDEN
LERYEIWRTNPFSESADELRDRVKGVSAKPFMETQPTLDALHCDIGNATEFYKIFQDEIG
EVYQKSNPSREERRRWRSTLDKHLRKNLYLKPVMRMNGNYARRLMTREAVEVVCELVLSE
ERREALRKLMDLYLQMKPVWRSTRPSQDCPVQLCQYSYNSQQFADLLSTTFKYRYDGKIT
NYLHKTLAHVPEIVERDGSIGAWASEGNESGNKLFRRFRKMNARQSKTFELEDVLKHHWL
YTSKYLQKFMEAHKNSAKAKQATFNPEETPDEIDLALEVPDF
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagggaggtggagttccgaagatgctcccagagcctccatgcctgacgaactg
tctcatcctaagttttcggaatggaagtttaagctctttcgggtcaggtccatggagaag
gcccctctgcctaatgaaacaccggtggagaaggaaaaccagccagaggtagcaatggaa
aactcaggctctcctggcagtgttatgaagctctgtttcggagggaagagtaaggaaaac
atggagactgctcaagggagagtggaccttaagctccaggaaattgatacacatatgaat
cttctcaaatgtctgtgtcgcctttgtggcctttcaatacagaaggctaaaggtccgtcc
catgaagtccagggagacttggaagtgtccagccggtgtgccttgcgtaggatgggctgt
aagtttctgaactggccagaggtgatcttgaaggtcttcaaggtggatgtgacaaccgac
atggagacggtgcatccatctttattttgtcacagatgctggactgctgtcatgagggga
ggaggtttctgttctttcactaggacccagattccagactggaagccccacaacacccat
tgcaacctctgcttccctaagaagagctcttttcaccgaataggaaggaagcgggccaaa
ccacttaaaattgcacacagccatccaaagagaatcaaaagggactcctcagaatcccca
gggaccaatacagcatggagacagaccccagagaatactggatcaggtggacaagaacgg
ttaaaactatcagttcagagaggacaatgggtaaagaatatcacccaatgccagagggac
catctgagcactaagcttatccctcctgaagtcccagcagacttcttacataccgttacc
tgccaagtgtgtgatcacttgctttctgaccctgtccagtcaccatgtagacacctgttc
tgtcgggtctgcatcctaaggtacagtcgtgctttgggccaaaactgtcccacctgtaac
caacatctaaatccatcccatctgaccaggccagccaaattcttccttgccaccctcaac
tctatccctctgctttgccccagtgaaggatgcaacgactgggtccgatttgactccttt
agggaacactgcctcaatcactaccatgaaaaagaatctcaggaagaacaaaaagcttta
gaacagaattttgatgattacttgccggtcaacaaaggaggacgtcctcgacagcatcta
ttgtcattgacccgtcgggctcaaaagcacaggctgagagatttgaagaaccaggtgaag
gcatttgctgaaaaggaagaaggaggggatgtgaagtcagtctgcttgacgctcttcctt
ctggcattgagagctgggaatgaacacaaacaagcagatgaactggaagctatgatgcaa
ggcagagggtgtgggctgcatcctgcagtgtgtttggctataagggtaaacaccttcctt
agctgcagtcagtaccacaagatgtaccgcactgtaaaggccactagtggccgccagata
ttccagccactgcacactctacgcaatgcagagaaagagcttctccctgggttccaccaa
tttgagtggcagccagctttgaaaaacgtttccagctcctgggatgtgggaatcattgat
ggcctctctggttggaaaacctctgttgacgatgtccctgcggacaccatctccagaaga
ttccgttatgatgtggcactggtttctgcattaaaagatttggaagaggacataatggaa
ggactgagagagagggagctggacgacagcatgtgcacctctggttttaccgttgtggtg
aaagaatcatgtgatggtatgggagatgtcggcgagaagcatggatctggtccagcggtt
cctgagaaggcagtgaggttttccttcacaatcatgtccatctccctccgagttgagggt
gaggacgatggaatcaccatttttcaggaacaaaagccaaactctgagctctcctgcaga
cctctgtgcctcatgtttgtggatgagtctgaccatgagaccctgacagccatcttggga
cctgtggtagcagagcggaaggccatgatggaaagtcggcttattttatctgttggtggt
cttctacgatcctttaggttcttctttcggggcacaggctatgatgagaagatggttcgt
gaaatggaaggcttagaagcatcaggctccacttacatatgcacactctgtgactcaacc
agagcagaagcatctcagaacatggtgctacattccattacacgtagccatgatgaaaat
cttgagcgctatgagatctggaggacaaatcctttctcagagtctgctgacgaactgcgt
gaccgggtcaaaggtgtttccgccaagcctttcatggagacccagcctactctagatgct
ctgcactgtgacattggcaatgctactgaattctacaagatctttcaggatgagattggt
gaagtctaccagaaaagcaatccgagtcgagaggaacgccgtcgttggcgctcaaccctg
gacaaacatctacgcaagaacctgtacctcaagcctgtgatgaggatgaatggaaactat
gctcgtcggctgatgacacgtgaagctgtggaggtggtctgtgagctggttctttccgag
gaacggcgtgaggctctacggaaactgatggacctctaccttcagatgaagcctgtgtgg
cgttctacccgtccctcccaagactgccctgtccaactctgtcagtacagctacaactct
cagcaatttgctgatctcctttccaccacgtttaagtaccgctatgatggaaaaatcacc
aactacctacacaagactctagcccatgttcctgagattgttgagagagacgggtctatt
ggagcatgggccagtgaaggcaatgagtctgggaacaagctgttcagacgttttcggaag
atgaatgcaaggcagtccaaaacatttgaacttgaagatgtactgaaacaccactggctg
tacacctccaagtatcttcagaagtttatggaggctcacaagaattcagcaaaagcaaag
caagccacattcaacccagaagagaccccagatgaaattgatttggctcttgaagtacca
gatttttga
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