Carassius auratus (goldfish): 113066833
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Entry
113066833 CDS
T07313
Name
(RefSeq) low-density lipoprotein receptor-related protein 5-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04150
mTOR signaling pathway
caua04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113066833
04150 mTOR signaling pathway
113066833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113066833
Membrane trafficking [BR:
caua04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
113066833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
Vgb_lyase
SGL
EGF_LRP2
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
113066833
NCBI-ProteinID:
XP_026094673
Ensembl:
ENSCARG00000031274
UniProt:
A0A6P6MDS6
LinkDB
All DBs
Position
50:7294549..7354296
Genome browser
AA seq
1617 aa
AA seq
DB search
MELKQGALAMGILLLELLLCCSLTVIRGSPLLLFANRRDVRLVDAEAGRTESTVVVGDLE
DAAAVDFLFSEGLIFWTDVSEEAIKQTYYNLSTISMKEGTLGRGQTVVVSGLDSPDGLAC
DWLGHKLYWTDSETNRIEVANLDGTSRKVLFWQDLDQPRAIALNPAERYLYWTDWGEEPR
IERAGMDGCNRQIIVQTQIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGTAREAVVEG
SLTHPFALTLYEETLYWTDWQTRSIHACNKHSGENRREILSSIYSPMDIQVLGQERQPNI
QTPCSERNGGCSHLCLLSPMPPFYSCACPTGVKLKEDGKTCRPGAEQVLLLARRTDLRRI
SLDLPDFTDIVLQVSDIRHAIAIDYDPVEGYVYWTDDEVKAIRRARIDGSDAHTLVTSEI
NHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRRILISENLDEPRAIVLDPIKGYMYW
TDWGEVPKIERANLDGMDRVVLINTSLGWPNGLAIDYIAGKLYWGDAKTDKIEVMNVDGT
NRMTILDDKLPHIFGFALLGEYIYWTDWQRRSIERVHITNGTREVIVEQLPDLMGLKATK
VSETFGTNGCAENNGGCSHLCFHRPQGLSCACPMGLELLSDLHTCVVPEAFLLFTNRADI
RSISLGTNSNDVPIPLTGVKEVSALDFDVLENRIYWTDVITKTISRAFMNGSLVEAVIEF
GLDYPEGMAVDWMGRNLYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLALDPANGYM
YWTEWGGRPRITRAHMDGSNIVTLVDKVGRANGLTIDFIDQRLYWTDLDTSMIESTNMQG
LQREIVADDLPHPFGLTQYRDYIYWTDWNLRSIERADKRSGLNRTVVQGHLEYVMDILVF
HSSRQDGANECSQNNGHCAHLCLASPSGAQCRCASHYTLEANGHNCSSPSNFLLFSQKSS
ISRMVLGEQSPDMILPIHVMKNLRAISFDPLERLIYWVDGRQNIRSARDDGTQASTVMTP
TNVHAKQPHDLSLDPYSRTVYWTCETTNTINIHRMDGHVIGEVLKDDVDKPRAIVVNAEK
GYMYFTTVQDRSAKIEGASLDGTERESLFTTGLIRPVALALDNKLGKLFWVDADLKRIES
SDLSGANRVVLQDSNILQPVGLTVLGDHLYWIDKQQQMIESVDKLSGEKRTRIQGRLQYL
TGIHAVEYMEPEEFASHPCSRNNGDCSHICIAKGDGTPRCSCPMHLVLLQNLLSCGEPPG
CSSEQFNCATGEIDCIPIAWRCDGMAECADNSDEMNCPICSELQFQCDKGQCVDSQLRCN
GEPDCADGSDEQDCDTICMPNQFRCDNNQCILKKQQCDSFADCADKSDELFCDFPSSPND
IPRHTSTIGPVIGIILSVFVMGGMCFVCQRVVSRHYKGPNGGFPHEYISGTPHVPLNFIA
PTNSQHGTFTGISCGKSMMSSVSLMGSSSSGAPLYDRNHVTGASSSSSSSTKGVFYPQML
NPPPSPATDRSLYNAEVFYSSNSPSTTRSYRPYVMRGVAPPTTPCSTDVCDSDYTTSRWK
TNKYYMDLNSDSDPYPPPPTPRSQYMSAEESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaagcaaggagctcttgcgatggggattttactgctggaactgctgctttgt
tgtagtctgacggtgattcgtggttctcccttgctgctctttgccaaccggcgggatgtt
cggctggtggacgctgaggcgggccggacggagtccaccgtggttgtcggtgatcttgag
gatgcggccgcagtggacttcctcttctcagagggcctgatattctggacggacgtcagt
gaagaggccatcaaacagacctactacaacctctctactatctctatgaaggagggcaca
ctgggcagagggcagacagtggtggtatcaggtctggattctcccgatggcttagcctgc
gactggctcggacacaaactctactggaccgactcggagacgaaccgcattgaagtggcc
aacttggacggcacctctcgcaaggtgctcttctggcaagatctcgaccaacccagggcg
atagcgttaaaccctgctgaaaggtacttgtattggaccgactggggggaggagccaaga
atagaaagggcgggaatggatggctgcaatcgacaaatcattgtccagacgcaaatatac
tggcccaatggattgaccattgacctcgaggagcagaaactctactgggcggatgcaaag
ctcagcttcatccacagggccaacttggacggaacagctcgggaggccgttgtggagggt
tccctcactcacccgtttgccctcactctttatgaagagacgctctactggacagactgg
caaacccgatccatccacgcctgcaacaaacatagtggagagaatcggagagaaattctt
agcagcatttactcgccgatggacatccaggtgctgggccaagagcggcagcccaacatt
caaactccatgcagtgaaagaaacggaggctgttcccatctgtgtctcctctcccccatg
ccgcccttctatagctgtgcttgtccaactggggttaagctcaaagaggatggaaagact
tgtcgaccaggggcggaacaggtgcttctgctagctcgccgcaccgaccttcggcggata
tccctggacttaccggacttcacagacatcgtcttacaagtcagtgacatccggcatgca
attgccatcgactatgacccggtggaaggctacgtatactggacagatgacgaggtgaag
gccatccgccgtgcccgaatagatggaagcgacgcccatactctggtcaccagtgagatc
aaccatcctgatggaattgcggtggactgggtggcacgtaatctctactggacggacaca
ggcaccgatcgcatcgaggtaaccagactcaatggcacttctcgacgcatcctcatatct
gaaaacctggacgaaccgcgagccatcgtgttggatcccataaaaggatacatgtactgg
actgactggggtgaggtgcccaagatcgaacgagcaaacctggatggcatggacagggtt
gtgctgatcaacacctcccttggttggcccaacggtttagccattgactacatcgcagga
aagctttactggggcgatgccaaaacagacaaaattgaggtcatgaatgtggatggcact
aataggatgaccattctagatgacaaactacctcatatctttggttttgcgctgctggga
gagtatatctactggactgattggcagcggaggagcattgaaagagttcacatcaccaac
ggcacccgtgaggtcatcgtcgagcagctccctgacctcatgggtctcaaagccacaaaa
gtctcagagacctttggcactaacggctgtgcggaaaacaacggcggctgcagtcacctg
tgtttccatcggcctcaaggtctaagctgcgcctgccccatgggtttggagttgctgagt
gacctgcatacttgtgtggtcccagaagctttcttgctcttcaccaaccgcgctgacata
cgcagcatctccctgggcaccaacagcaacgacgtgcccatcccactcaccggggtcaag
gaggtctccgcactggactttgatgttttggaaaataggatctactggaccgatgtcatc
accaagactatcagcagagcctttatgaatggcagtttggtggaagcggtcattgagttt
ggcctggactatcccgagggtatggctgtggactggatgggtcgaaacctctactgggct
gatacaggcaccaaccgtatcgaagtggcccgtctggacggccagtaccgacaagtgctg
gtctgcaaagacctggataaccctcgctctcttgcactggatcctgccaatgggtacatg
tactggaccgaatggggaggtcgacccaggataactcgagctcacatggacggcagtaac
attgtgactttggtggacaaagtgggccgagctaacggtctcacaattgacttcatcgac
cagcggctctactggacagacttggacacctccatgattgagtcaacaaacatgcaaggt
ttgcagagagagatagtggccgacgatcttcctcatccgtttggcttgacccagtatcgc
gattacatctactggactgactggaacctgcgtagcatcgagcgggcagacaagcgcagt
ggcttgaaccgaacggtggtacaagggcacctggagtacgtcatggacatcctggttttc
cactcctccagacaagatggcgccaacgagtgttcgcagaacaacggccactgcgcccac
ctctgcctagcatcaccttctggagcccagtgccgctgtgcttcccactacaccctagag
gcaaacggacacaactgcagctcgccctctaacttcctgctcttcagccagaagagctcc
atcagtcgaatggtcctaggagaacagagtccagacatgattctacccattcacgttatg
aagaacttgcgcgccatcagcttcgaccctctggaacgcctgatatactgggtggatggc
cgacaaaacatccgcagtgcccgagacgatggcactcaggcgtccacagtgatgacccca
accaacgtccatgcaaagcagcctcatgacttgagtctggacccctacagtcgcaccgtc
tactggacctgcgagaccaccaacaccatcaacatccatcgcatggacggccatgtgatc
ggggaggtcctgaaggatgacgtggacaagcctcgcgctatcgtggtgaatgctgagaaa
ggctacatgtatttcactactgtccaggatcggtcagccaaaattgaaggtgcgtctttg
gatggaactgagcgtgaatcccttttcacaaccggtttgatccgccctgtggcccttgct
ttggacaacaagttgggcaaactgttctgggtggacgcagacctcaaacggatcgagagc
agtgacctgtctggggccaatcgtgtggttctccaggactccaacatccttcagcctgtc
ggtctgactgtgttgggcgatcacctgtactggatcgataaacagcagcagatgattgaa
agcgtggacaagctgagcggagagaagaggacccgcattcaggggcgactccaatacctt
actggcatccacgcggtggagtacatggaaccagaggagttcgcatcccacccttgttct
cgtaacaacggagattgctcccacatctgcatcgctaagggcgatgggacgccacgctgc
tcgtgtcccatgcacctggtgctgcttcaaaatctgctcagctgtggagagcctcccggc
tgctctagtgagcagttcaactgcgctactggcgagatcgactgcatccccattgcttgg
cgctgtgatggcatggctgagtgtgcagacaatagcgatgagatgaactgccccatctgc
tccgaactgcagttccagtgtgacaaaggccagtgtgtggactctcagctgcgctgcaac
ggagagcccgactgcgcggatggctctgatgaacaggattgcgacaccatttgcatgcct
aatcagttccgctgtgacaacaaccagtgtattctgaagaaacagcagtgtgactctttc
gcagactgtgctgacaaatctgacgagcttttctgcgatttcccttcatcccccaacgac
attcctcgtcacacaagcaccatcggccccgtcatcggcatcattctttctgtctttgtg
atgggaggcatgtgttttgtgtgtcagagagtcgtgtctcgtcattacaagggccctaat
ggaggcttcccacacgagtacatcagcgggacccctcacgtgcccctcaacttcatcgca
cccacaaattcacagcacggtacttttacaggtatttcttgtgggaagtccatgatgagc
tcagtgagtctcatgggcagcagtagcagtggggcacctctctacgacaggaaccatgtg
acgggagcatcatccagtagctcttccagcaccaaaggagtcttttaccctcagatgctc
aaccctcctccatcgccagcaacagatcgctcactttacaatgcagaagtcttttattca
tctaacagcccatcaacaaccaggtcgtacaggccgtatgtgatgcgaggggtcgcgccc
cccaccaccccctgcagcacagacgtgtgtgacagcgactacaccacgagccgctggaaa
accaacaagtactacatggacctcaattcagactctgacccctaccctccaccccccacc
ccacgcagtcagtacatgtcagcggaggagagctgccccccctcgccctccaccgaacgc
agctacttccacctgtgtcccccgcccccctcgccctgcacggactcctcgtga
DBGET
integrated database retrieval system
