Carassius auratus (goldfish): 113066839
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Entry
113066839 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113066839
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113066839
Cell adhesion molecules [BR:
caua04515
]
Immunoglobulin superfamily
NGL family
113066839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_14
V-set
LRR_9
Ig_2
LRRNT
DUF7617
Ig_6
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
113066839
NCBI-ProteinID:
XP_026094688
UniProt:
A0A6P6MDT8
LinkDB
All DBs
Position
50:7696968..7766811
Genome browser
AA seq
647 aa
AA seq
DB search
MINKMTSSLMQQTMRGPRWNRALSDPLFVLSLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLANLNTLELFENRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLTYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVRLDELEMSGNQLSIVRPGSF
KGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCASPTSHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRANSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
MGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETTEAAHDEGHPTVQPKGGPT
PSSGIWDTLPPSFTTTTTTARTPLSTKATDKTYTIPVTALIDGSLNTLDEVMKTTKIIIG
CFVAITLMAAVMLIIFYKMRKQHHQQNHHAPARTIEIINVDEDCVTGGPTMEGHLTLAPL
EHEHLNHYNAYKTAYSHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgataaacaagatgacctcctccctgatgcagcagacgatgagaggtcctaggtggaat
cgggccctgtccgacccattgtttgtgctgtcgctggccctgcagcttctggtggtggct
ggcctggtgcgagcgcagacatgcccctctgtctgctcttgtagcaaccagttcagcaag
gtaatttgtacgcgacgtggccttcgagatgtacccgatggtatttccaccaacacaagg
tacctgaaccttcaggagaacctcatccaggtgatcaaggttgacagcttcaaacatcta
aggcacttggagatcctgcagctcagcaagaaccacatccgcaacattgaaatcggcgct
ttcaatgggctggccaacctcaacactctagaactcttcgaaaatcgtctaaccacaatc
cccaatggggctttcgagtacctgtccaaacttaaagaactttggttgaggaataaccct
attgagagtataccctcttatgccttcaaccgcgtaccatctctgcgaaggctggacttg
ggtgagctgaaaaggctcacgtatatctcagaaggtgcctttgaaggcctcagcaacctg
cggtacctgaacctgggcatgtgcaacttgaaggagatccccaacctcattccacttgtt
cgtttggatgagttggagatgtcaggaaaccagctgtctatagttaggccagggtctttc
aaaggcctcgtccacttacaaaaactgtggatgatgcatgcgcagatccagacgattgaa
agaaatgcctttgatgatcttcagtcccttgtggagctcaatttggcccacaataacctt
acccttctgccccatgacctcttcacaccactacaccacttggagagggtgcacttgcat
cacaacccctggaactgcaactgtgacatcctctggctcagttggtggctaaaggaaatg
gtacctgccaataccagttgctgtgcccgctgtgcatcacctaccagccacaaagggcgc
tacattggcgaactcgaccagaactatttccattgttatgcaccggtgatcgtggagcca
ccagcagacctgaacgtgactgagggcatggcagcagaactcaaatgtagagcaaattct
ttgacctcagtcagctggatcacacccaatgggtccatcatgacgcacggggcgtacaag
gtacgcatatccgtgctcaatgatgggactttaaactttaccaacgtcacaatgcaggac
atgggaacctacacttgcatggtgagcaattctgcaggcaacacgacagcctcggctaca
ctcaacgtgtcctcaacagagaacagcagcttcagttacttcactacagttactgtggag
accacagaagcggcacatgatgagggccaccctacggtacaaccaaagggtggccctact
ccttcttctggaatatgggacactttaccaccttccttcaccaccaccaccacaacagca
cggacaccactgtccaccaaggctactgacaagacctacacaatccctgtcacagccctg
attgatggctcactcaacaccttggatgaagtcatgaagactacaaagatcatcataggt
tgctttgtggcaatcaccctgatggcggctgtcatgctgatcatattttataaaatgcgc
aaacagcatcaccagcagaaccaccatgcaccggcacgaaccatcgagattatcaacgtg
gatgaagattgtgtaacgggtggacctacaatggagggccacctcacccttgccccactg
gagcatgagcacctgaatcattacaacgcctacaagactgcatacagccatgcctccacc
atcaattctatacacagctctgcccacgaacctttactaattcgggctagctcaaaagac
aatgtacaagaaacccagatctga
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